Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L04
(561 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF519524-1|ABP73587.1| 250|Anopheles gambiae APL2 protein. 25 1.3
EF519520-1|ABP73583.1| 250|Anopheles gambiae APL2 protein. 25 1.3
EF519513-1|ABP73576.1| 250|Anopheles gambiae APL2 protein. 25 1.3
DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reduct... 24 3.9
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 3.9
EF519512-1|ABP73575.1| 250|Anopheles gambiae APL2 protein. 23 5.2
EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein. 23 5.2
EF519516-1|ABP73579.1| 250|Anopheles gambiae APL2 protein. 23 9.0
EF519509-1|ABP73572.1| 250|Anopheles gambiae APL2 protein. 23 9.0
EF519507-1|ABP73570.1| 250|Anopheles gambiae APL2 protein. 23 9.0
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 23 9.0
>EF519524-1|ABP73587.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 25.4 bits (53), Expect = 1.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -2
Query: 299 ESKWSLGPIPDKYNNFAVLKVPADITTSLFVKN 201
E +WS I YN +V+++P ++ + + N
Sbjct: 134 ERRWSFDLIDASYNKLSVVRIPPNLRQLVAIGN 166
>EF519520-1|ABP73583.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 25.4 bits (53), Expect = 1.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -2
Query: 299 ESKWSLGPIPDKYNNFAVLKVPADITTSLFVKN 201
E +WS I YN +V+++P ++ + + N
Sbjct: 134 ERRWSFDLIDASYNKLSVVRIPPNLRQLVAIGN 166
>EF519513-1|ABP73576.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 25.4 bits (53), Expect = 1.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -2
Query: 299 ESKWSLGPIPDKYNNFAVLKVPADITTSLFVKN 201
E +WS I YN +V+++P ++ + + N
Sbjct: 134 ERRWSFDLIDASYNKLSVVRIPPNLRQLVAIGN 166
>DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reductase
protein.
Length = 487
Score = 23.8 bits (49), Expect = 3.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 289 HLDSLGIDVVQDLPV 333
HLD+ ID+V+ LPV
Sbjct: 52 HLDNSDIDIVEKLPV 66
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.8 bits (49), Expect = 3.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 395 QVPLSTAI*VKIMTWSCK 342
QVPL + + + M WSC+
Sbjct: 185 QVPLGSDVGITAMAWSCE 202
>EF519512-1|ABP73575.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 5.2
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = -2
Query: 299 ESKWSLGPIPDKYNNFAVLKVPADITTSLFVKN 201
E +WS I +N +V+++P ++ + + N
Sbjct: 134 ERRWSFDLIDASHNKLSVVRIPPNLRQLVAIGN 166
>EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 5.2
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = -2
Query: 299 ESKWSLGPIPDKYNNFAVLKVPADITTSLFVKN 201
E +WS I +N +V+++P ++ + + N
Sbjct: 134 ERRWSFDLIDASHNKLSVVRIPPNLRQLVAIGN 166
>EF519516-1|ABP73579.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 22.6 bits (46), Expect = 9.0
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -2
Query: 299 ESKWSLGPIPDKYNNFAVLKVPADI 225
E +WS I +N +V+++P ++
Sbjct: 134 ERRWSFDLIDASHNKLSVVRIPPNL 158
>EF519509-1|ABP73572.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = -2
Query: 299 ESKWSLGPIPDKYNNFAVLKVPADITTSLFVKN 201
E +WS I N +V+++P ++ + + N
Sbjct: 134 ERRWSFDLIDASXNKLSVVRIPXNLRQLVAIGN 166
>EF519507-1|ABP73570.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = -2
Query: 299 ESKWSLGPIPDKYNNFAVLKVPADITTSLFVKN 201
E +WS I N +V+++P ++ + + N
Sbjct: 134 ERRWSFDLIDASXNKLSVVRIPXNLRQLVAIGN 166
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 22.6 bits (46), Expect = 9.0
Identities = 20/95 (21%), Positives = 40/95 (42%)
Frame = -2
Query: 302 KESKWSLGPIPDKYNNFAVLKVPADITTSLFVKNFSSFPCLITLTPRTVLFSVRILVTIA 123
K W + +P N + DIT + ++ + F + + P TVL S L +
Sbjct: 197 KSGTWDIIEVPAYLNVYEGNPTETDITFYIIIRRKTLFYTVNLILP-TVLIS--FLCVLV 253
Query: 122 FLRTNKLGFFDLLSRAVSVLCLCPLFIVCEKRPTP 18
F + G + ++ +S+L +F++ + P
Sbjct: 254 FYLPAEAG--EKVTLGISILLSLVVFLLLVSKILP 286
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.137 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,349
Number of Sequences: 2352
Number of extensions: 11010
Number of successful extensions: 37
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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