Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L03
(289 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 34 0.004
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 34 0.005
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 31 0.025
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 31 0.033
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 29 0.10
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 0.23
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 28 0.23
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 28 0.23
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 0.23
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 0.23
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 28 0.31
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 27 0.41
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 27 0.41
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 0.95
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 26 0.95
SPCC16C4.06c |||tRNA pseudouridylate synthase |Schizosaccharomyc... 26 0.95
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 26 0.95
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 26 1.2
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 1.7
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 25 1.7
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 2.2
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 25 2.9
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 25 2.9
SPAC1250.02 |mug95||sequence orphan|Schizosaccharomyces pombe|ch... 25 2.9
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 25 2.9
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 24 3.8
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 24 3.8
SPBC11C11.10 ||SPBC3B8.13c|pseudouridine synthase|Schizosaccharo... 24 3.8
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 24 3.8
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 24 3.8
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 23 6.7
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 23 6.7
SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces pombe... 23 8.8
SPBC1703.01c ||SPBP4H10.22c|RNase P and RNase MRP subunit|Schizo... 23 8.8
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 23 8.8
SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 23 8.8
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 23 8.8
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 23 8.8
SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces pombe... 23 8.8
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 23 8.8
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 34.3 bits (75), Expect = 0.004
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 9 EERRL---QSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKK- 176
EE+RL Q K+++ R++++ ++ R + KK+ R K A + R + K+
Sbjct: 642 EEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRI 701
Query: 177 -EDRNRRRKKTAIAEERR 227
E+R RR K EERR
Sbjct: 702 LEERKRREKLDKEEEERR 719
Score = 32.7 bits (71), Expect = 0.011
Identities = 19/91 (20%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAE---ERKLQSPKNENCNRRRKKTAIAEER 178
R K+ ++++L+ K+E+ +RR+ +AE ++ L++ + E ++R++ + E+
Sbjct: 592 REKEKKRDKKKQLKLAKEEE-RQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQ 650
Query: 179 RPQSPKKEDCNRRRKKTAIAEERRLQSPKKE 271
+ + E R K+ E++L+ ++E
Sbjct: 651 EKKQQELERQKREEKQKQKEREKKLKKQQQE 681
Score = 32.7 bits (71), Expect = 0.011
Identities = 22/98 (22%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +2
Query: 5 RRRKKTAIAE---ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEE 175
+RR+ +AE ++ L++ ++E+ ++R++ + E Q K + R++++ ++
Sbjct: 613 QRREAERLAEQAAQKALEAKRQEEARKKREEQRLKRE---QEKKQQELERQKREEKQKQK 669
Query: 176 RRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
R + KK+ R+K A E+R + +K L+ K
Sbjct: 670 EREKKLKKQQQEADREKMA-REQRLREEEEKRILEERK 706
Score = 32.3 bits (70), Expect = 0.014
Identities = 18/82 (21%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAE---ERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
KE+ +RR+ +AE ++ L++ ++E+ ++R++ + E Q K+++ R++++
Sbjct: 608 KEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKRE---QEKKQQELERQKREE 664
Query: 184 AIAEERRLQSPKKEDCNRRRKK 249
++ R + KK+ R+K
Sbjct: 665 KQKQKEREKKLKKQQQEADREK 686
Score = 32.3 bits (70), Expect = 0.014
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
+ +K+ + ++R + K+++ ++ KK +R+ + + + +K + E +R
Sbjct: 650 QEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMA-REQRLREEEEKRILEERKRR 708
Query: 185 QSPKKEDCNRRRK----KTAIAEERRLQSPK 265
+ KE+ RRR+ K + +ERRL+ K
Sbjct: 709 EKLDKEEEERRRRELLEKESEEKERRLREAK 739
Score = 31.5 bits (68), Expect = 0.025
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +3
Query: 12 ERRLQSPKKEDCNRRRK-KTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
ER+ + K++ R +K K E R + +++ K + E +R + KE+
Sbjct: 658 ERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEE 717
Query: 189 RRRK----KTAIAEERRLQSPK 242
RRR+ K + +ERRL+ K
Sbjct: 718 RRRRELLEKESEEKERRLREAK 739
Score = 29.5 bits (63), Expect = 0.10
Identities = 20/82 (24%), Positives = 44/82 (53%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
EAK+++ RKK +R Q K+++ R++++ ++ + + KK+ R+K
Sbjct: 630 EAKRQE--EARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREK- 686
Query: 184 AIAEERRLQSPKKEDCNRRRKK 249
+A E+RL+ +++ RK+
Sbjct: 687 -MAREQRLREEEEKRILEERKR 707
Score = 28.7 bits (61), Expect = 0.18
Identities = 20/87 (22%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPK----KEDCNRR 171
EA+K+ +R K+ +++ L+ K+E+ +++++ ++ + ++ + +E R
Sbjct: 636 EARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLRE 695
Query: 172 RKKTAIAEER-RLQSPKKEDCNRRRKK 249
++ I EER R + KE+ RRR++
Sbjct: 696 EEEKRILEERKRREKLDKEEEERRRRE 722
Score = 27.1 bits (57), Expect = 0.54
Identities = 15/80 (18%), Positives = 41/80 (51%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
++ + + R+K ++++ KE+ +RR+ +AE+ ++ + + RKK
Sbjct: 584 QERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREE 643
Query: 190 AEERRLQSPKKEDCNRRRKK 249
+R Q K+++ R++++
Sbjct: 644 QRLKREQEKKQQELERQKRE 663
Score = 25.8 bits (54), Expect = 1.2
Identities = 18/86 (20%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKE-DCNRRRKKTAIAEE*KLQSPKKEDCNRRRKK 180
+A +E ++R+ + E K+E + + R+K ++ K KE+ +RR+
Sbjct: 558 QAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREA 617
Query: 181 TAIAE---ERRLQSPKKEDCNRRRKK 249
+AE ++ L++ ++E+ ++R++
Sbjct: 618 ERLAEQAAQKALEAKRQEEARKKREE 643
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 33.9 bits (74), Expect = 0.005
Identities = 20/82 (24%), Positives = 45/82 (54%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R+++ + E+ Q ++E R ++KIA + ++L+ + E R +++ EER
Sbjct: 91 RQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERI-RLQEQQRRKEERDQ 149
Query: 185 QSPKKEDCNRRRKKTAIAEERR 250
+ +KE+ R R++ + +ER+
Sbjct: 150 KLREKEEAQRLRQEQILNKERQ 171
Score = 32.3 bits (70), Expect = 0.014
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 GEERRLQSPK-KEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
G+E++LQ + +E+ R+++ + E+ Q ++E R + K A + + L+ +KE
Sbjct: 75 GKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKE- 133
Query: 183 RNRRRKKTAIAEERRLQSPKKED 251
R R +++ EER + +KE+
Sbjct: 134 RIRLQEQQRRKEERDQKLREKEE 156
Score = 27.1 bits (57), Expect = 0.54
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 32 EERRLQSPK-KEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDC 208
+E++LQ + +E+ R+++ + E++ Q + E R ++K A + + + +KE
Sbjct: 76 KEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERI 135
Query: 209 NRRRKKTAIAEERRLQSPKKEDLQ 280
R +++ EER + +KE+ Q
Sbjct: 136 -RLQEQQRRKEERDQKLREKEEAQ 158
Score = 26.2 bits (55), Expect = 0.95
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R EER + +KE+ R R++ + +ER Q K N + ++ IA + K ++
Sbjct: 143 RKEERDQKLREKEEAQRLRQEQILNKER--QQLKLNNFFTKGVEKRIAPNENFVADKTDE 200
Query: 183 RNRRRKK 203
N K+
Sbjct: 201 LNEFEKE 207
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 31.5 bits (68), Expect = 0.025
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3
Query: 236 RLQSSFFGDCSLLSSAIAVFFLRRLQSSFFGDCSFHSSAIAVFFLRRLQSS 84
R+ SF G SS + L R ++ F DC F+ ++ FF RRL +S
Sbjct: 33 RMSRSFSG-----SSVLNEINLSRTKNLFLNDCKFNKNSFEKFFARRLSNS 78
Score = 27.9 bits (59), Expect = 0.31
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 213 RLQSSFFGDCGLLSSAIAVFFLRRLQFSFFGDCSFLSSAIAIFFLRRLQSS 61
R+ SF G SS + L R + F DC F ++ FF RRL +S
Sbjct: 33 RMSRSFSG-----SSVLNEINLSRTKNLFLNDCKFNKNSFEKFFARRLSNS 78
Score = 27.5 bits (58), Expect = 0.41
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 167 RLQSSFFGDCSFHSSAIAVFFLRRLQSSFFGDCSLLSSAIAVFFLRRLQSS 15
R+ SF G SS + L R ++ F DC ++ FF RRL +S
Sbjct: 33 RMSRSFSG-----SSVLNEINLSRTKNLFLNDCKFNKNSFEKFFARRLSNS 78
Score = 27.5 bits (58), Expect = 0.41
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = -2
Query: 276 KSSFFGDCSLLSSAIAVFFLRRLQSSFFGDCGLLSSAIAVFFLRRLQFSFFGDCSFLSSA 97
K+ F DC ++ FF RRL +S G + +++ F G + + +
Sbjct: 53 KNLFLNDCKFNKNSFEKFFARRLSNSVAPTPGGILQETEKIPSKKVAFWLLGSSALVLAI 112
Query: 96 IAIFFLRRLQSS 61
+ + + RL S
Sbjct: 113 VVVGGITRLTES 124
Score = 25.8 bits (54), Expect = 1.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 242 LRRLQSSFFGDCSLLSSAIAVFFLRRLQSS 153
L R ++ F DC ++ FF RRL +S
Sbjct: 49 LSRTKNLFLNDCKFNKNSFEKFFARRLSNS 78
Score = 24.6 bits (51), Expect = 2.9
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 243 SSAIAVFFLRRLQSSFFGDCGLLSSAIAVFFLRRLQFS 130
SS + L R ++ F DC ++ FF RRL S
Sbjct: 41 SSVLNEINLSRTKNLFLNDCKFNKNSFEKFFARRLSNS 78
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 31.1 bits (67), Expect = 0.033
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIA-------IAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
E + L+ +K+ R + + A ++EE+K+ P N+N N+++K A ++ PQ+
Sbjct: 47 EAKALKKARKQASRRAKAEAAAANNPPGVSEEKKVAIP-NKNSNQQKK----ASKQNPQN 101
Query: 191 PKKEDCNRRRKKTAIAEERRL 253
+ D N + KK I EE+++
Sbjct: 102 SPETDANLQEKK--IFEEKQV 120
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 29.5 bits (63), Expect = 0.10
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
KK A+ E+ + + KK + +KK+ +AE+ + K ++ KK++ A +
Sbjct: 159 KKNAVVEKGKSKPSKKSV--KAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAAAV 216
Query: 194 KKEDCNRRRKKT 229
KED RKK+
Sbjct: 217 IKEDKVSDRKKS 228
Score = 27.5 bits (58), Expect = 0.41
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 37 KKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSP 216
KK A+ E+ + + KK + +KK +AE+ + K ++ KK++ A +
Sbjct: 159 KKNAVVEKGKSKPSKKSV--KAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAAAV 216
Query: 217 KKEDCNRRRKKT 252
KED RKK+
Sbjct: 217 IKEDKVSDRKKS 228
Score = 24.6 bits (51), Expect = 2.9
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 83 KKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSP 262
KK A+ E+ K S ++ + +KK +AE+ + K ++ KK++ A +
Sbjct: 159 KKNAVVEKGK--SKPSKKSVKAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAAAV 216
Query: 263 KKEDLQSPK 289
KED S +
Sbjct: 217 IKEDKVSDR 225
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.3 bits (60), Expect = 0.23
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEE-RRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDR 185
EE+R + ++E+ R ++ IAEE +RL ++ R+K E ++ + K + +
Sbjct: 255 EEKRAR--EEEEQRIREEEARIAEEEKRLAEVEEARKEEARLKKKEKERKKKEEMKAQGK 312
Query: 186 --NRRRKKTAIAEERRLQ 233
++++K+ +RRLQ
Sbjct: 313 YLSKKQKEQQALAQRRLQ 330
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 28.3 bits (60), Expect = 0.23
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 71 NRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRK 223
+++RK + +E+ + ++ K E +RRKK A +E++ + KKE +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKEKKEKKKK 472
Score = 28.3 bits (60), Expect = 0.23
Identities = 16/51 (31%), Positives = 33/51 (64%)
Frame = +1
Query: 94 NRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRK 246
+++RK +E+ + ++ KKE+ +RRKK A +E++ + KKE +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKEKKEKKKK 472
Score = 28.3 bits (60), Expect = 0.23
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +2
Query: 140 NRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+++RK +E+ ++ KKE+ +RRKK A +E++ + KKE + K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKEKKEKKK 471
Score = 27.9 bits (59), Expect = 0.31
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 25 NRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRK 177
+++RK +E+ ++ KKE+ +RRKK A E+ K + KKE +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEAKKEK-KEKKEKKEKKEKKKK 472
Score = 27.5 bits (58), Expect = 0.41
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRK 154
+++RK +E+ ++ KKE+ +RRKK A +E+K + K E +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKEKKEKKKK 472
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = +3
Query: 48 NRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNR 191
+++RK +E+ ++ KKE R++ +E++ + KKE + +
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKKK 472
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 28.3 bits (60), Expect = 0.23
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +3
Query: 15 RRLQSPKKEDCNRRRKKTAIAEERR----LQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R L K+ + R+R K EERR ++ KKE R ++ +E + K+E
Sbjct: 115 RELLEKKRIEAERQRLKDE--EERRKKELMEKEKKEKERIRLIEEQKHKENEQRRLKQEQ 172
Query: 183 RNRRRKKTAIAEERRLQSPKKED 251
+ +RK+ A E+R++ K+D
Sbjct: 173 IDAKRKEEE-AREKRMKETFKDD 194
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 28.3 bits (60), Expect = 0.23
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 60 KKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRL 230
+K AI E R KE +R M + +RR+Q + E+ +R+ + A A +
Sbjct: 816 QKRAIEERTRAAREAKER-EQREMAEKLERQRRIQQERDEEISRKLAEKAAARRANI 871
Score = 23.8 bits (49), Expect = 5.0
Identities = 21/91 (23%), Positives = 40/91 (43%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R R++ I E++ ++ ++ + R A EE + + E +R AI E R
Sbjct: 774 RERQRKEIFEQKLAEAIREAEEEAAR---AAEEEANRELHEQEEAQKR----AIEERTRA 826
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDL 277
KE +R + +RR+Q + E++
Sbjct: 827 AREAKER-EQREMAEKLERQRRIQQERDEEI 856
Score = 23.8 bits (49), Expect = 5.0
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +3
Query: 69 AIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 248
A EE + ++E +R + EER + + ++R +R + +RR+Q + E
Sbjct: 800 AAEEEANRELHEQEEAQKRAI-----EERTRAAREAKEREQREMAEKLERQRRIQQERDE 854
Query: 249 D 251
+
Sbjct: 855 E 855
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/51 (21%), Positives = 24/51 (47%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRL 161
EER + + ++ +R + +RR+Q + E +R+ + A A +
Sbjct: 821 EERTRAAREAKEREQREMAEKLERQRRIQQERDEEISRKLAEKAAARRANI 871
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 28.3 bits (60), Expect = 0.23
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 74 RRRKKIAIAEERKLQSPKNENCNR--RRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEER 247
R + I +++E K + K E N+ RK+ A E + KKE K + ++
Sbjct: 504 RNKGVIKVSDEAKEKIQKEEEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKE 563
Query: 248 RLQSPKKED 274
R Q KKE+
Sbjct: 564 REQYAKKEN 572
Score = 23.0 bits (47), Expect = 8.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 51 RRRKKTAIAEERRLQSPKKENCNR---RRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEE 221
R + +++E + + K+E N+ R+ + + E + + K++DR + + +E
Sbjct: 504 RNKGVIKVSDEAKEKIQKEEEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKE 563
Query: 222 RRLQSPKKED 251
R Q KKE+
Sbjct: 564 RE-QYAKKEN 572
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 27.9 bits (59), Expect = 0.31
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 255 CSLLSSAIAVFFLRRLQSSFFGDCGLLSSAIAVFFLRR 142
CSLLS AI+V + SS G LS + +FF R
Sbjct: 177 CSLLSFAISVLGRNKAPSSLPFALGNLSEKVTIFFTLR 214
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 27.5 bits (58), Expect = 0.41
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 54 RRKKTAIAEERRLQSPKKEN--CNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEE 221
R +K E +RL+ KE ++ K AEE+RLQ + + + +++A A++
Sbjct: 713 RERKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKERAKYAKQMSRESAHADQ 770
Score = 25.8 bits (54), Expect = 1.2
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRK--KTAIAEERRLQSPKKENCNRRRMKTAIAEE 152
E +RL+ KE+ ++K K AEE+RLQ + + + ++A A++
Sbjct: 721 EAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKERAKYAKQMSRESAHADQ 770
Score = 24.2 bits (50), Expect = 3.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 143 RRRKKTAIAEERRPQSPKKED-CNRRRKKTAIAEERRLQSPK 265
R RK+ A +R + K+E ++ +K AEE+RLQ +
Sbjct: 713 RERKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKER 754
Score = 23.4 bits (48), Expect = 6.7
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 7 AKKED-CNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE 129
AK+E ++ +K AEE+RLQ + + + +++A A++
Sbjct: 729 AKEEKRLKKKEEKARKAEEKRLQKERAKYAKQMSRESAHADQ 770
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 27.5 bits (58), Expect = 0.41
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 98 AEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDL 277
AEE + + +++KK++ +E +S KKE ++ KK ++ + +S + ED
Sbjct: 438 AEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKK---HKKSKRKSEESEDG 494
Query: 278 QSPK 289
+SPK
Sbjct: 495 ESPK 498
Score = 27.5 bits (58), Expect = 0.41
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 102 KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 248
+K+ ++K A E + + +K+D+ ++ K E +SPKK+
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKK 500
Score = 25.4 bits (53), Expect = 1.7
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 79 KKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRK 246
+K+ + K A E K + +K+D ++ K E +SPKK+ +++ K
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKKSK 507
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/50 (24%), Positives = 29/50 (58%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRK 154
+++KK++ +E +S KKE ++ KK ++ + +S E+ +++K
Sbjct: 453 KKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKK 502
Score = 24.2 bits (50), Expect = 3.8
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRK 177
+K+ + K A E + + +K+D ++ K E +SPKK+ +++ K
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKKSK 507
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 6 GEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRR 125
GE + + +K+D ++ K E +SPKK+ +++
Sbjct: 466 GESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKK 505
Score = 23.8 bits (49), Expect = 5.0
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +3
Query: 51 RRRKKTAIAEERRLQSPKKENCNR-----RRMKTAIAEERRLQSPKKEDRNRRRK 200
+++KK++ +E +S KKE + ++ K E +SPKK+ ++++ K
Sbjct: 453 KKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKKSK 507
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 155 KTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKE 271
K A E + + +K+D ++ K E +SPKK+
Sbjct: 462 KEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKK 500
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 0.95
Identities = 14/66 (21%), Positives = 32/66 (48%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
EE L+ ++ + + ++ + EE ++ + M + EE++ KK+DR
Sbjct: 889 EEALLKEKQERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDEEKQSGKKKKKDRK 948
Query: 189 RRRKKT 206
+R+ K+
Sbjct: 949 KRKSKS 954
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 26.2 bits (55), Expect = 0.95
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKT 206
SP + + + RR ++ ++P+ + RR +K A++R QSP + +
Sbjct: 89 SPAESESSERRHTPQTNSQKSQKTPRLSSNKRRTLKND-AKQRNSQSPGTDTSDANLTIQ 147
Query: 207 AIAEERR 227
+I RR
Sbjct: 148 SIEAPRR 154
Score = 25.0 bits (52), Expect = 2.2
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +2
Query: 50 SPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKT 229
SP + + + RR ++ ++P+ + N+RR A++R QSP + +
Sbjct: 89 SPAESESSERRHTPQTNSQKSQKTPRLSS-NKRRTLKNDAKQRNSQSPGTDTSDANLTIQ 147
Query: 230 AIAEERR 250
+I RR
Sbjct: 148 SIEAPRR 154
Score = 23.4 bits (48), Expect = 6.7
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 119 SPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSP 262
SP + RR ++ ++P+ N+RR A++R QSP
Sbjct: 89 SPAESESSERRHTPQTNSQKSQKTPRLSS-NKRRTLKNDAKQRNSQSP 135
Score = 23.0 bits (47), Expect = 8.8
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAI-AEERRPQ 187
R+ T ++ Q + N+RR A++R QSP + + +I A R PQ
Sbjct: 98 RRHTPQTNSQKSQKTPRLSSNKRRTLKNDAKQRNSQSPGTDTSDANLTIQSIEAPRRAPQ 157
>SPCC16C4.06c |||tRNA pseudouridylate synthase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 413
Score = 26.2 bits (55), Expect = 0.95
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 189 DCGLLSSAIAVFFLRRLQFSFFGDCSFLSS 100
DC + S + FF+ + QF F D + L+S
Sbjct: 368 DCFISSESFQSFFILQKQFQLFQDLALLTS 397
Score = 24.6 bits (51), Expect = 2.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 258 DCSLLSSAIAVFFLRRLQSSFFGDCGLLSS 169
DC + S + FF+ + Q F D LL+S
Sbjct: 368 DCFISSESFQSFFILQKQFQLFQDLALLTS 397
Score = 24.6 bits (51), Expect = 2.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 143 DCSFHSSAIAVFFLRRLQSSFFGDCSLLSS 54
DC S + FF+ + Q F D +LL+S
Sbjct: 368 DCFISSESFQSFFILQKQFQLFQDLALLTS 397
Score = 24.6 bits (51), Expect = 2.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 97 DCNLLSSAIAVFFLRRLQSSFFGDCSLLSS 8
DC + S + FF+ + Q F D +LL+S
Sbjct: 368 DCFISSESFQSFFILQKQFQLFQDLALLTS 397
Score = 24.2 bits (50), Expect = 3.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 120 DCSFLSSAIAIFFLRRLQSSFFGDCSLLSS 31
DC S + FF+ + Q F D +LL+S
Sbjct: 368 DCFISSESFQSFFILQKQFQLFQDLALLTS 397
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 26.2 bits (55), Expect = 0.95
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 126 RMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKED 251
R++ A E+RRLQ+ + +RN +R + + L++ + E+
Sbjct: 213 RLRKAEREKRRLQNERNRERNAQRVSASKLDLAILEAAEVEE 254
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 1.2
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNE---NCNRRRKKTAIAEERR 181
R+K + E+R+ + + +D ++KK+ E+ L+ +E ++ K + E+R
Sbjct: 23 RRKWGLLEKRKDYAQRAQDYKTKQKKLKRLREKALERNPDEFYHEMTHKKTKNGVPLEQR 82
Query: 182 PQS 190
S
Sbjct: 83 EDS 85
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 25.4 bits (53), Expect = 1.7
Identities = 13/57 (22%), Positives = 28/57 (49%)
Frame = +3
Query: 36 KEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKT 206
+ D + K + R L++ +EN + K+++ + S +K NR+RK++
Sbjct: 14 ERDMKKNSKVVENSSARSLKNKTEENKTIDKHKSSVGPKEPKSSLEKPKANRKRKQS 70
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 25.4 bits (53), Expect = 1.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 26 IAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKN 130
I EE +S ++ED R+KI I +RK+ +N
Sbjct: 585 ITEEE--ESSEEEDLTTSRRKIGITSKRKVSVKRN 617
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 2.2
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +2
Query: 71 NRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDC 208
N K+ A E+K N+ NR + K R ++PK C
Sbjct: 7 NLNNKEHNRASEKKNSRTHNKKTNRNQSKEKPVSSRSVETPKNAVC 52
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 24.6 bits (51), Expect = 2.9
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Frame = +2
Query: 17 KTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQ-SPKNENCN----RRRKKTAIAEERR 181
K +IA R + +KE NRRR + + E KL S E + R + +I E +
Sbjct: 201 KKSIAAAREAEQKRKEMENRRRNQ-ELEEFSKLPFSTVPEALSFFIARMERDESILEFLQ 259
Query: 182 PQSPKKEDCNRRRKKTA--IAEERR 250
QS K+ +++ TA I+ ER+
Sbjct: 260 RQSGNKKSYKKKKNNTAEGISPERK 284
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 132 KTAIAEERRLQSPKKEDRNRRRKK 203
K +IA R + +KE NRRR +
Sbjct: 201 KKSIAAAREAEQKRKEMENRRRNQ 224
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 24.6 bits (51), Expect = 2.9
Identities = 14/71 (19%), Positives = 33/71 (46%)
Frame = +3
Query: 18 RLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRR 197
+L+ ++E N R A+ ++ + + + + + E+ LQ ++ RR
Sbjct: 403 KLKFKQEERRNPARVNQALKIKKPIDMEEYSKVSGKVFRPVEEMEKELQKIRENFEEERR 462
Query: 198 KKTAIAEERRL 230
+ +AE+R+L
Sbjct: 463 RAIEVAEQRQL 473
>SPAC1250.02 |mug95||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 178
Score = 24.6 bits (51), Expect = 2.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQS 98
EE+ L KEDC +K + + LQS
Sbjct: 66 EEKELPKDIKEDCKTVEEKEKVVPRKPLQS 95
Score = 24.2 bits (50), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIAIAEERKLQS 121
EE+ L KEDC +K + + LQS
Sbjct: 66 EEKELPKDIKEDCKTVEEKEKVVPRKPLQS 95
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 24.6 bits (51), Expect = 2.9
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
E +++P + K A +++K S K++ + RR+K + Q+P
Sbjct: 1105 EHAIRTPVSSFAKQTTNKHANLKQKKTHSSKSDKKSSRRRKNEKRRKLNEQNP 1157
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = +3
Query: 81 ERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSP 239
E +++P + K A ++++ S K + ++ RR+K + Q+P
Sbjct: 1105 EHAIRTPVSSFAKQTTNKHANLKQKKTHSSKSDKKSSRRRKNEKRRKLNEQNP 1157
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 24.2 bits (50), Expect = 3.8
Identities = 17/74 (22%), Positives = 35/74 (47%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKT 206
S ++E+ N R + ++E + ++E + K +AE+ KKE+ + KKT
Sbjct: 161 SEEEEEENGARIEELNSDEEDAEQAEEEILEKPVPKDEVAEKHSKDKLKKEE---KEKKT 217
Query: 207 AIAEERRLQSPKKE 248
A+ + K++
Sbjct: 218 AVDVSDSVNGKKRK 231
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 24.2 bits (50), Expect = 3.8
Identities = 16/73 (21%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIAIAEERKLQ--SPKNENCNRRRKKTAIAEERRPQSPKKED 205
E+R+ S KK+ + A+ + +KL+ + K + ++++ K + +++R+ S KE+
Sbjct: 166 EKRKKHSSKKKSKKKTSTGSAL-DPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEE 224
Query: 206 CNRRRKKTAIAEE 244
+++KK + ++
Sbjct: 225 --KKKKKIKLKDK 235
Score = 23.4 bits (48), Expect = 6.7
Identities = 14/78 (17%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 22 CNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQ--SPKKEDCNRRRKKTAIAE 195
C E+R + K+ ++ + + KL+ + KK+ ++++ K + ++
Sbjct: 154 CEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSK 213
Query: 196 ERRLQSPKKEDCNRRRKK 249
+R+ S KE+ +++ K
Sbjct: 214 KRKSGSSDKEEKKKKKIK 231
>SPBC11C11.10 ||SPBC3B8.13c|pseudouridine
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 164 IAEERRPQSPKKEDCNRRRKKT 229
+A+ RP P D NRRR+K+
Sbjct: 79 LAQYFRPAPPHPNDRNRRRRKS 100
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 141 IAEERRLQSPKKEDRNRRRKKT 206
+A+ R P DRNRRR+K+
Sbjct: 79 LAQYFRPAPPHPNDRNRRRRKS 100
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 24.2 bits (50), Expect = 3.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 198 FFGDCGLLSSAIAVFFLRRLQFSFFGD 118
FF +CG ++ A+ F R+ F +G+
Sbjct: 140 FFANCGTEANETALKFARKAAFEKYGE 166
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 24.2 bits (50), Expect = 3.8
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAE 149
+E+RL+ P D + R+K A + +K+ R+ IA+
Sbjct: 104 KEKRLKLPNVSDVDNRKKAKIDAHDTTPLDEEKDELEEERIAEDIAQ 150
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 23.4 bits (48), Expect = 6.7
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 60 KKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDR-NRRRKKT 206
K + + R + SP K + R +MK+ R +KE R N RR K+
Sbjct: 738 KVLVVDQSRMVSSPSKVSI-RPKMKSVRLLAREASEARKEIRHNARRNKS 786
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 23.4 bits (48), Expect = 6.7
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 48 NRRRKKTAIAEERRLQSPKKENC---NRRRMKTAIAEERRLQSPKKEDRNRRRKK 203
+ R + A E RR Q + +R R A AEE RL K+E ++KK
Sbjct: 252 SEREAREAARELRRQQDNAYQASLARDRERQAFARAEEERLAKEKEEREIVQKKK 306
>SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 23.0 bits (47), Expect = 8.8
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 77 RRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPK---KEDCNRRRKKTAIAEER 247
+ K + + K KN++ RRK+ A EE+ P+ + E+ + + +E
Sbjct: 5 KNKIVRQQQYMKALHQKNKDKLERRKERAKEEEKDPEKKRLRLSENIPATIESKRVYDET 64
Query: 248 RLQSPKKEDLQS 283
++ E+LQ+
Sbjct: 65 IIEDKPDEELQA 76
>SPBC1703.01c ||SPBP4H10.22c|RNase P and RNase MRP
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 47 QSPKKED-CNRRRKKIAIAEERKLQ 118
Q +KE +++RKK++ E++KLQ
Sbjct: 59 QGDRKESVASKKRKKLSSKEKKKLQ 83
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 23.0 bits (47), Expect = 8.8
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 47 QSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEE 175
+ +K ++ AEE ++ +EN +RRK A EE
Sbjct: 198 EKKRKRRAKAAEREAQEAEELSMELGLDENLKKRRKAGASDEE 240
>SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 23.0 bits (47), Expect = 8.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 50 SPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKED 205
S KKE +R + E+ + QS ++ N RK+ + E+ S ED
Sbjct: 33 SAKKEKLHRMALSMEAIEDVEDQSFNGKSSNLVRKRRGLDEDIDEFSSSSED 84
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 23.0 bits (47), Expect = 8.8
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 84 RRLQSPKK--ENCNRRRMKTAIAEERRLQSPKKEDRNRRRK 200
R L KK +N N + + A A E+R+Q P + RR+
Sbjct: 22 RNLSHVKKYDKNTNLQSNRNAKALEKRVQDPSISEHECRRQ 62
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 23.0 bits (47), Expect = 8.8
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 48 NRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERR 227
N+R + + L+ + +RRR + + R S ++ DR R R + EE+R
Sbjct: 1567 NKRPRSSDSQSPSNLREEDERENSRRRARQ--DDRRDRDSRQQRDRPRDRTSRSAREEKR 1624
>SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 342
Score = 23.0 bits (47), Expect = 8.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 105 KENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 248
KE+ + A +E + KKE + R+KK+ ++ L KK+
Sbjct: 283 KESARLSNLGAASRKEHLNKFEKKEAKKDRKKKSKDGDQTTLLLRKKQ 330
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 23.0 bits (47), Expect = 8.8
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 163 CSLLSSAIAVFILRRLQFSFFGDCNL-LSSAIAVF 62
C L+SA + + F+GDC L L ++I VF
Sbjct: 915 CQALTSAESQLNFDYDRLEFYGDCFLKLGASITVF 949
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,165,231
Number of Sequences: 5004
Number of extensions: 23478
Number of successful extensions: 250
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 67723590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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