Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L03
(289 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 29 0.046
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 29 0.046
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 27 0.14
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 27 0.14
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 25 0.74
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 25 0.74
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 24 0.98
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 24 1.3
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 22 4.0
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 22 4.0
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 22 4.0
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 22 5.2
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 21 6.9
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 21 9.1
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 21 9.1
AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical prote... 21 9.1
AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosens... 21 9.1
AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosens... 21 9.1
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 28.7 bits (61), Expect = 0.046
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
+++TA+ EE KED NR + ++ +AEE E +KK IA ER+
Sbjct: 159 KERTALFEEISGSGLLKEDYNRLKHEMQMAEE--------ETQFTYQKKRGIAAERKEAR 210
Query: 191 PKKEDCNR 214
+K++ +R
Sbjct: 211 LEKQEADR 218
Score = 24.6 bits (51), Expect = 0.74
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 149 RKKTAIAEERRPQSPKKEDCNRRRKKTAIAEE 244
+++TA+ EE KED NR + + +AEE
Sbjct: 159 KERTALFEEISGSGLLKEDYNRLKHEMQMAEE 190
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 132 KTAIAEERRLQSPKKEDRNRRRKKTAIAEE 221
+TA+ EE KED NR + + +AEE
Sbjct: 161 RTALFEEISGSGLLKEDYNRLKHEMQMAEE 190
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 28.7 bits (61), Expect = 0.046
Identities = 20/80 (25%), Positives = 41/80 (51%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
EE R ++E+ R ++ AI E+ ++E +R + E+R + +KE+R
Sbjct: 445 EEHRAARLREEERAREAREAAIEREK-----ERELREQREREQREKEQREKEQREKEERE 499
Query: 189 RRRKKTAIAEERRLQSPKKE 248
R++++ E+R + +KE
Sbjct: 500 RQQRE---KEQREREQREKE 516
Score = 25.4 bits (53), Expect = 0.42
Identities = 13/67 (19%), Positives = 33/67 (49%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
E ++E +R ++ E+R + +KE+ R++++ E + + ++ + R R++
Sbjct: 469 EKERELREQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERE 528
Query: 184 AIAEERR 204
E R
Sbjct: 529 RERERER 535
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 27.1 bits (57), Expect = 0.14
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R E RR ++ ++ + NRR EERR P + R + A R ++
Sbjct: 1100 RAEVRRARNERR-NANRRAATARRREERRAGLPPTPPASPRTAQRRAALRERQARFRERR 1158
Query: 183 RNRR 194
RNRR
Sbjct: 1159 RNRR 1162
Score = 24.2 bits (50), Expect = 0.98
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 33 KKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN-RRRKKTA 209
+++D + + AE RR ++ ++ N NRR EERR P + R ++ A
Sbjct: 1087 ERQDEDAAELEAQRAEVRRARNERR-NANRRAATARRREERRAGLPPTPPASPRTAQRRA 1145
Query: 210 IAEERR 227
ER+
Sbjct: 1146 ALRERQ 1151
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 27.1 bits (57), Expect = 0.14
Identities = 9/48 (18%), Positives = 29/48 (60%)
Frame = +2
Query: 146 RRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
R ++ ++++ Q +++ ++R++ +++R Q P+++ LQ P+
Sbjct: 184 RERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQ 231
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 24.6 bits (51), Expect = 0.74
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +2
Query: 38 RRLQSPKKE-DCNRRRKKIAI--AEERKLQSPKNEN--CNRRRKKTAIAE 172
RR + PKK D +R + A A+ ++L++ NEN +R++T AE
Sbjct: 485 RRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTLSAE 534
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 24.6 bits (51), Expect = 0.74
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +2
Query: 38 RRLQSPKKE-DCNRRRKKIAI--AEERKLQSPKNEN--CNRRRKKTAIAE 172
RR + PKK D +R + A A+ ++L++ NEN +R++T AE
Sbjct: 485 RRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTLSAE 534
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 24.2 bits (50), Expect = 0.98
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +1
Query: 25 NRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KL--QSPKKE--DCNRRR-KKTAI 189
++RRK + + R +PKK+ + ++ A AE + PK D R+ +K+
Sbjct: 79 SKRRKVGTVTKAYREPAPKKQAPAKAKEPKAKAERQSTLRKRPKFTVIDSGRKSFRKSTA 138
Query: 190 AEERRLQSPKKEDCNRRRKKT 252
A+ QS K+ RK+T
Sbjct: 139 AKTAATQSRLKQRFEAERKRT 159
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 140 NRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEER 247
++RRK + + R +PKK+ + ++ A AE +
Sbjct: 79 SKRRKVGTVTKAYREPAPKKQAPAKAKEPKAKAERQ 114
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.8 bits (49), Expect = 1.3
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 80 RKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRK--KTAIAEERRL 253
R + +ER + + N RR ER P P RRR+ + A+A R
Sbjct: 1045 RNADVLRQERLRRYNETRNAARRAATQQRQAERLPPPPPSPRTERRREVNRLAVARLRER 1104
Query: 254 QSPKKEDL 277
Q + ++
Sbjct: 1105 QRAARAEM 1112
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 77 RRKKIAIAEERKLQSPKNENCNRRRKKTAIA 169
RRKK+ +++K+Q+ + ++KK +A
Sbjct: 1001 RRKKVVEDDKKKIQAIITDLDEEKKKKLKVA 1031
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 36 KEDCNRRRKKTAIAEERRLQSPKKENCN 119
K DC T + R S K ENC+
Sbjct: 214 KRDCPMESNNTPTSTTMRDYSRKNENCS 241
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +2
Query: 59 KEDCNRRRKKIAIAEERKLQSPKNENCN 142
K DC + + S KNENC+
Sbjct: 214 KRDCPMESNNTPTSTTMRDYSRKNENCS 241
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 22.2 bits (45), Expect = 4.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 49 IAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNR 168
IAE+R+L SP D + ++ A + +++ KK+ +R
Sbjct: 310 IAEQRQLASPTDPDISALDRQARHALKTAIRASKKQFFDR 349
Score = 22.2 bits (45), Expect = 4.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 141 IAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 248
IAE+R+L SP D + ++ A + +++ KK+
Sbjct: 310 IAEQRQLASPTDPDISALDRQARHALKTAIRASKKQ 345
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 21.8 bits (44), Expect = 5.2
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +3
Query: 60 KKTAIAEERRLQSPKKENCNRRRMKTA----IAEERRLQSPKKEDRNRRRKKTAIAEERR 227
K+ ++ L+ P+ R++T AE R + P R+ RR+ A +
Sbjct: 298 KEAIRVRQQELRGPEAVREAAGRLRTGPVPGAAERHRRRRPPPRRRHDRRRYPTNAGHKV 357
Query: 228 LQSPKK 245
+ +PK+
Sbjct: 358 MNAPKE 363
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +2
Query: 113 LQSPKNENCNRRRKKTAIAEERRPQSPK 196
+ S + C R R+ A+ P SP+
Sbjct: 28 MASNRTVRCPRTRRSEAVMTRSTPSSPR 55
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 21.0 bits (42), Expect = 9.1
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 143 RRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQ 280
R TA+ + P+ E RR + A + R Q P+++ Q
Sbjct: 245 RSEALTAVRGDVVPELTYSEVVRRRYRGKATGKPRSQQQPQQQQQQ 290
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 53 PKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAE 172
P + R +KIA A R L++ ++ R ++AE
Sbjct: 812 PHVREVTTRARKIADAVTRLLRNHSGPKTSKARLLASVAE 851
>AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical protein
protein.
Length = 122
Score = 21.0 bits (42), Expect = 9.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 149 RKKTAIAEERRPQSPKK 199
RK A EER+PQ KK
Sbjct: 84 RKVIAHLEERKPQEWKK 100
>AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosensory
protein CSP2 protein.
Length = 122
Score = 21.0 bits (42), Expect = 9.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 149 RKKTAIAEERRPQSPKK 199
RK A EER+PQ KK
Sbjct: 84 RKVIAHLEERKPQEWKK 100
>AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosensory
protein CSP1 protein.
Length = 122
Score = 21.0 bits (42), Expect = 9.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 149 RKKTAIAEERRPQSPKK 199
RK A EER+PQ KK
Sbjct: 84 RKVIAHLEERKPQEWKK 100
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,414
Number of Sequences: 2352
Number of extensions: 4680
Number of successful extensions: 34
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17384760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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