Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L03
(289 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55820.1 68418.m06956 expressed protein 43 3e-05
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 43 4e-05
At1g13650.2 68414.m01605 expressed protein 41 1e-04
At1g13650.1 68414.m01604 expressed protein 41 1e-04
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 41 2e-04
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 39 6e-04
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 39 6e-04
At3g28770.1 68416.m03591 expressed protein 38 0.001
At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family... 37 0.002
At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family... 37 0.002
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 35 0.010
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 35 0.010
At5g60030.1 68418.m07527 expressed protein 34 0.014
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 34 0.018
At2g33435.1 68415.m04098 RNA recognition motif (RRM)-containing ... 34 0.018
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 33 0.024
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 33 0.032
At4g36860.2 68417.m05227 LIM domain-containing protein low simil... 33 0.032
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 33 0.042
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 33 0.042
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 32 0.056
At3g48120.1 68416.m05248 expressed protein 32 0.056
At1g56660.1 68414.m06516 expressed protein 32 0.056
At5g36650.1 68418.m04383 hypothetical protein 32 0.074
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 32 0.074
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 31 0.13
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 31 0.13
At2g28620.1 68415.m03479 kinesin motor protein-related 31 0.13
At1g79200.1 68414.m09234 expressed protein 31 0.13
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 31 0.13
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 31 0.17
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 30 0.22
At5g53800.1 68418.m06685 expressed protein 30 0.22
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 30 0.22
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 30 0.22
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 30 0.22
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 30 0.22
At5g10800.1 68418.m01255 RNA recognition motif (RRM)-containing ... 30 0.30
At4g02720.1 68417.m00368 expressed protein temporary automated f... 30 0.30
At4g00238.1 68417.m00030 DNA-binding storekeeper protein-related... 30 0.30
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 29 0.39
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 29 0.39
At5g57710.1 68418.m07214 heat shock protein-related contains sim... 29 0.39
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 29 0.39
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 29 0.39
At5g13340.1 68418.m01535 expressed protein 29 0.39
At2g31410.1 68415.m03838 expressed protein 29 0.39
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 0.39
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 29 0.39
At1g55340.1 68414.m06322 expressed protein 29 0.39
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 29 0.52
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 29 0.52
At4g36980.1 68417.m05240 expressed protein 29 0.52
At4g35940.1 68417.m05113 expressed protein 29 0.52
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 29 0.52
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 29 0.52
At2g30960.1 68415.m03776 expressed protein 29 0.52
At2g01100.3 68415.m00018 expressed protein 29 0.52
At2g01100.2 68415.m00017 expressed protein 29 0.52
At2g01100.1 68415.m00016 expressed protein 29 0.52
At5g52230.1 68418.m06483 expressed protein 29 0.69
At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-relat... 29 0.69
At5g27140.1 68418.m03239 SAR DNA-binding protein, putative stron... 29 0.69
At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18) 29 0.69
At3g18990.1 68416.m02410 transcriptional factor B3 family protei... 29 0.69
At1g29570.1 68414.m03616 zinc finger protein-related contains si... 29 0.69
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 29 0.69
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 28 0.91
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 28 0.91
At5g54410.1 68418.m06777 hypothetical protein 28 0.91
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 28 0.91
At1g56110.1 68414.m06443 nucleolar protein Nop56, putative simil... 28 0.91
At5g63950.1 68418.m08030 SNF2 domain-containing protein / helica... 28 1.2
At3g52220.1 68416.m05737 expressed protein 28 1.2
At2g39320.1 68415.m04827 OTU-like cysteine protease family prote... 28 1.2
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 28 1.2
At2g20590.2 68415.m02408 reticulon family protein non-consensus ... 28 1.2
At2g20590.1 68415.m02407 reticulon family protein non-consensus ... 28 1.2
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila... 28 1.2
At1g13120.1 68414.m01521 expressed protein contains Prosite PS00... 28 1.2
At5g46795.1 68418.m05765 expressed protein 27 1.6
At2g16990.1 68415.m01959 expressed protein 27 1.6
At3g42690.1 68416.m04439 Ulp1 protease family protein contains P... 27 2.1
At3g12860.1 68416.m01603 nucleolar protein Nop56, putative simil... 27 2.1
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 27 2.1
At2g42760.1 68415.m05295 expressed protein 27 2.1
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 27 2.1
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 27 2.1
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 27 2.1
At2g22795.1 68415.m02704 expressed protein 27 2.1
At5g63320.1 68418.m07946 expressed protein 27 2.8
At4g24170.1 68417.m03468 kinesin motor family protein contains P... 27 2.8
At1g52450.1 68414.m05921 ubiquitin carboxyl-terminal hydrolase-r... 27 2.8
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 27 2.8
At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RS... 26 3.7
At5g52040.1 68418.m06458 arginine/serine-rich splicing factor RS... 26 3.7
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 26 3.7
At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (D... 26 3.7
At4g10640.1 68417.m01738 calmodulin-binding family protein conta... 26 3.7
At3g58050.1 68416.m06471 expressed protein 26 3.7
At3g51640.1 68416.m05663 expressed protein 26 3.7
At2g44430.1 68415.m05525 DNA-binding bromodomain-containing prot... 26 3.7
At2g24440.1 68415.m02921 expressed protein 26 3.7
At2g14240.1 68415.m01587 hypothetical protein and genefinder 26 3.7
At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containi... 26 3.7
At1g33500.1 68414.m04146 hypothetical protein 26 3.7
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 26 3.7
At1g23930.1 68414.m03019 hypothetical protein contains Pfam prof... 26 3.7
At5g61850.1 68418.m07760 floral meristem identity control protei... 26 4.8
At5g51840.1 68418.m06427 expressed protein 26 4.8
At5g25380.1 68418.m03010 cyclin 3a (CYC3a) nearly identical to c... 26 4.8
At5g06110.1 68418.m00679 DNAJ heat shock N-terminal domain-conta... 26 4.8
At3g51650.1 68416.m05664 expressed protein 26 4.8
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 26 4.8
At2g13320.1 68415.m01468 expressed protein anf genefinder 26 4.8
At1g37020.1 68414.m04616 Ulp1 protease family protein 26 4.8
At1g30060.1 68414.m03675 COP1-interacting protein-related simila... 26 4.8
At5g62750.1 68418.m07877 expressed protein predicted proteins, C... 25 6.4
At5g54920.1 68418.m06840 expressed protein 25 6.4
At5g48690.1 68418.m06025 hypothetical protein 25 6.4
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 25 6.4
At4g36700.1 68417.m05208 cupin family protein low similarity to ... 25 6.4
At4g19150.1 68417.m02825 ankyrin repeat family protein contains ... 25 6.4
At4g00820.1 68417.m00113 calmodulin-binding protein-related cont... 25 6.4
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 25 6.4
At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative si... 25 6.4
At3g22260.2 68416.m02814 OTU-like cysteine protease family prote... 25 6.4
At3g22260.1 68416.m02813 OTU-like cysteine protease family prote... 25 6.4
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 25 6.4
At1g65130.1 68414.m07384 ubiquitin carboxyl-terminal hydrolase-r... 25 6.4
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 25 6.4
At1g53110.1 68414.m06014 expressed protein 25 6.4
At1g49480.1 68414.m05546 transcriptional factor B3 family protei... 25 6.4
At1g24220.1 68414.m03054 paired amphipathic helix repeat-contain... 25 6.4
At4g31520.1 68417.m04476 SDA1 family protein contains Pfam profi... 25 8.4
At4g21500.1 68417.m03108 expressed protein ; expression support... 25 8.4
At4g15030.1 68417.m02309 expressed protein 25 8.4
At4g00250.1 68417.m00032 DNA-binding storekeeper protein-related... 25 8.4
At3g43680.1 68416.m04657 hypothetical protein 25 8.4
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 25 8.4
At3g12670.1 68416.m01579 CTP synthase, putative / UTP--ammonia l... 25 8.4
At2g41460.1 68415.m05122 apurinic endonuclease-redox protein / D... 25 8.4
At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase fami... 25 8.4
At1g67590.1 68414.m07700 remorin family protein contains Pfam do... 25 8.4
At1g65090.1 68414.m07379 expressed protein 25 8.4
At1g15660.1 68414.m01880 expressed protein similar to CENPCA pro... 25 8.4
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 43.2 bits (97), Expect = 3e-05
Identities = 23/95 (24%), Positives = 55/95 (57%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R +++ +++ ++ KKE+ +R++K+ +A +++++ K E R+RK+ +A+ +R
Sbjct: 1550 RAKQEQENLKKQEIEKKKKEE-DRKKKEAEMAWKQEMEKKKKEE-ERKRKEFEMADRKRQ 1607
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+ + + +K+ IA+ +R Q E LQ+ K
Sbjct: 1608 REEEDKRLKEAKKRQRIADFQRQQREADEKLQAEK 1642
Score = 41.1 bits (92), Expect = 1e-04
Identities = 22/92 (23%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R++K+ +A ++ ++ KKE+ R+RK+ +A+ ++ + +++ +K+ IA+ +R
Sbjct: 1572 RKKKEAEMAWKQEMEKKKKEE-ERKRKEFEMADRKRQREEEDKRLKEAKKRQRIADFQRQ 1630
Query: 185 Q--SPKKEDCNRRRKKTAIAEERRLQSPKKED 274
Q + +K + K+ A+ + Q KED
Sbjct: 1631 QREADEKLQAEKELKRQAMDARIKAQKELKED 1662
Score = 32.7 bits (71), Expect = 0.042
Identities = 16/74 (21%), Positives = 45/74 (60%)
Frame = +1
Query: 28 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRL 207
R +++ +++ ++ KKE+ +R++K+ +A + +++ KKE+ R+RK+ +A+ +R
Sbjct: 1550 RAKQEQENLKKQEIEKKKKEE-DRKKKEAEMAWKQEMEKKKKEE-ERKRKEFEMADRKRQ 1607
Query: 208 QSPKKEDCNRRRKK 249
+ + + +K+
Sbjct: 1608 REEEDKRLKEAKKR 1621
Score = 32.3 bits (70), Expect = 0.056
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 26 IAEERRLQSP-KKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKE 202
IAE++ KKE R K +K + K + R+KK A ++ KK+
Sbjct: 1531 IAEQKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAWKQEMEKKKK 1590
Query: 203 DCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+ R+RK+ +A+ +R + + + L+ K
Sbjct: 1591 EEERKRKEFEMADRKRQREEEDKRLKEAK 1619
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 42.7 bits (96), Expect = 4e-05
Identities = 21/92 (22%), Positives = 49/92 (53%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
RR ++ EE Q+ K+E+ + +++A E + Q + E R+R++ + R
Sbjct: 501 RREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREE 560
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQ 280
++ K+E+ +R ++ A E+ Q ++E+++
Sbjct: 561 EARKREEERKREEEMAKRREQERQRKEREEVE 592
Score = 37.5 bits (83), Expect = 0.001
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKK---EDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
RKK E R+ + +K E+ RR ++ EE Q+ K E + ++ A E
Sbjct: 477 RKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEE 536
Query: 182 PQSPKKEDCNRRRKKTAIAEERRLQSPKKED 274
Q ++E+ R+R++ + R ++ K+E+
Sbjct: 537 RQRKEREEVERKRREEQERKRREEEARKREE 567
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/80 (22%), Positives = 44/80 (55%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
++E+ RR ++ EE Q+ K+E+ + ++ A E + Q ++E+ R+R++
Sbjct: 495 EEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQE 554
Query: 190 AEERRLQSPKKEDCNRRRKK 249
+ R ++ K+E+ +R ++
Sbjct: 555 RKRREEEARKREEERKREEE 574
Score = 35.9 bits (79), Expect = 0.005
Identities = 17/82 (20%), Positives = 42/82 (51%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
EA+K + R+R++ + ++E+ + RK+ E+ + + K+E+ +R+++
Sbjct: 484 EARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKERE 543
Query: 184 AIAEERRLQSPKKEDCNRRRKK 249
+ +RR + +K RK+
Sbjct: 544 EVERKRREEQERKRREEEARKR 565
Score = 35.5 bits (78), Expect = 0.006
Identities = 16/88 (18%), Positives = 43/88 (48%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
RR ++ ++R + +K + R+R++ + + + E + RK+ E+
Sbjct: 469 RREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEE 528
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKK 268
+ K+E+ +R+++ + +RR + +K
Sbjct: 529 MAKKREEERQRKEREEVERKRREEQERK 556
Score = 35.1 bits (77), Expect = 0.008
Identities = 21/83 (25%), Positives = 42/83 (50%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R EER+ + +E+ RR ++ EE Q+ K+E + + A E Q ++E+
Sbjct: 488 REEERKRE---EEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREE 544
Query: 183 RNRRRKKTAIAEERRLQSPKKED 251
R+R++ + R ++ K+E+
Sbjct: 545 VERKRREEQERKRREEEARKREE 567
Score = 34.7 bits (76), Expect = 0.010
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
RRRK+ A +R ++ ++E+ +R++ E +K + + RK+ +RR
Sbjct: 445 RRRKEEEEARKRE-EAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRRE 503
Query: 185 QSPKK--EDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+ KK E+ + RK+ E+ + K+E+ + K
Sbjct: 504 EERKKREEEAEQARKREEEREKEEEMAKKREEERQRK 540
Score = 34.7 bits (76), Expect = 0.010
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPK---NENCNRRRKKTAIAEE 175
R+R++ EE ++ ++E+ RKK E RK + + E RR ++ EE
Sbjct: 454 RKREEAKRREEE--EAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREE 511
Query: 176 RRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQ 280
Q+ K+E+ + ++ A E Q ++E+++
Sbjct: 512 EAEQARKREEEREKEEEMAKKREEERQRKEREEVE 546
Score = 34.7 bits (76), Expect = 0.010
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +1
Query: 7 AKKEDCNRRRKKTAIAEE--RRLQSPKKED--CNRRRKKTAIAEE*KLQSPKKEDCNRRR 174
AK+ + R+RK+ E R Q K+E+ RR ++ E +++ K+E+ R+R
Sbjct: 576 AKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKR 635
Query: 175 KK--TAIAEERRLQSPKKEDCNRRRKK 249
++ I EE R Q ++ED R+R++
Sbjct: 636 EEEMAKIREEER-QRKEREDVERKRRE 661
Score = 34.7 bits (76), Expect = 0.010
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKK--EDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIA--- 169
+RR++ +ER KK E+ +R +++A E + Q + E+ R+R++
Sbjct: 609 KRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRRE 668
Query: 170 EERRPQSPKKEDCNRRRKKTAIAEERRLQSPK 265
EER+ + + R+K EE+R P+
Sbjct: 669 EERKREEEAAKRAEEERRKKEEEEEKRRWPPQ 700
Score = 34.3 bits (75), Expect = 0.014
Identities = 15/95 (15%), Positives = 49/95 (51%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R+R++ + R ++ K+E+ +R +++A E++ Q + E R+ ++ +
Sbjct: 547 RKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEE 606
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+ ++E +++++ + ++R + +K + + K
Sbjct: 607 MAKRREQERQKKEREEMERKKREEEARKREEEMAK 641
Score = 34.3 bits (75), Expect = 0.014
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKE-DCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAE-ERR 181
R+++ +A+ R + KKE + R+K+ A +R+ + K R+RK+ E +RR
Sbjct: 601 RKREEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRR 660
Query: 182 PQSPKKEDCNRRRKKTAI--AEERRLQSPKKED 274
+ + + R+R++ A AEE R + ++E+
Sbjct: 661 EEEAMRREEERKREEEAAKRAEEERRKKEEEEE 693
Score = 33.9 bits (74), Expect = 0.018
Identities = 16/77 (20%), Positives = 41/77 (53%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
K+E+ + ++ A E Q ++E+ R+R++ + + ++ K+E+ +R ++ A
Sbjct: 518 KREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAK 577
Query: 190 AEERRLQSPKKEDCNRR 240
E+ Q ++E+ R+
Sbjct: 578 RREQERQRKEREEVERK 594
Score = 33.9 bits (74), Expect = 0.018
Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Frame = +2
Query: 8 RRKKTAIAEER--RLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
R K+ +A++R Q ++E+ R+R++ + R+ ++ K E +R ++ A E+
Sbjct: 523 REKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQE 582
Query: 182 PQSPKKEDCNR-------RRKKTAIAEERRLQSPKKE 271
Q ++E+ R R+++ +A+ R + KKE
Sbjct: 583 RQRKEREEVERKIREEQERKREEEMAKRREQERQKKE 619
Score = 33.9 bits (74), Expect = 0.018
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNR------- 168
++E+ R+R++ + R ++ K+E+ +R ++ A E + Q ++E+ R
Sbjct: 541 EREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQE 600
Query: 169 RRKKTAIAEERRLQSPKKEDCNRRRKK 249
R+++ +A+ R + KKE RKK
Sbjct: 601 RKREEEMAKRREQERQKKEREEMERKK 627
Score = 33.1 bits (72), Expect = 0.032
Identities = 19/81 (23%), Positives = 42/81 (51%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
EER+ + ++E+ RRRK+ A +R ++E +RR + ++R + ++
Sbjct: 433 EERKRR--EEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREE 490
Query: 189 RRRKKTAIAEERRLQSPKKED 251
R+++ A+ R + K+E+
Sbjct: 491 ERKREEEEAKRREEERKKREE 511
Score = 33.1 bits (72), Expect = 0.032
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIA-EERRLQSPKKENCNRRRMKTAIAEERRLQSPKKE 179
R + ++ K+E+ RR ++ A EE + K+E R+ + E ++E
Sbjct: 445 RRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREE 504
Query: 180 DRNRRRKKTAIAEERRLQSPKKED 251
+R +R ++ A +R + K+E+
Sbjct: 505 ERKKREEEAEQARKREEEREKEEE 528
Score = 33.1 bits (72), Expect = 0.032
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
E KK + RK+ EER+ + +E+ RR ++ EE Q+ K+E+ + ++
Sbjct: 476 ERKKREEEEARKR---EEERKRE---EEEAKRREEERKKREEEAEQARKREEEREKEEEM 529
Query: 184 AIAEERRLQSPKKEDCNRRRKK 249
A E Q ++E+ R+R++
Sbjct: 530 AKKREEERQRKEREEVERKRRE 551
Score = 32.7 bits (71), Expect = 0.042
Identities = 19/81 (23%), Positives = 43/81 (53%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCN 211
EER+ + ++E+ RRRK+ A +R+ + E +RR++ ++R + ++
Sbjct: 433 EERKRR--EEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREE 490
Query: 212 RRRKKTAIAEERRLQSPKKED 274
R+++ A+ R + K+E+
Sbjct: 491 ERKREEEEAKRREEERKKREE 511
Score = 32.7 bits (71), Expect = 0.042
Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIA-EERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDR 185
EE Q+ K+E+ + ++ A EE R + ++E R+R + + R ++ K+E+
Sbjct: 510 EEEAEQARKREEEREKEEEMAKKREEERQRK-EREEVERKRREEQERKRREEEARKREEE 568
Query: 186 NRRRKKTAIAEERRLQSPKKED 251
+R ++ A E+ Q ++E+
Sbjct: 569 RKREEEMAKRREQERQRKEREE 590
Score = 32.3 bits (70), Expect = 0.056
Identities = 14/80 (17%), Positives = 42/80 (52%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
++E+ RR ++ ++R + +K + R+R++ + + ++E+ + RK+
Sbjct: 463 EEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEE 522
Query: 190 AEERRLQSPKKEDCNRRRKK 249
E+ + K+E+ +R+++
Sbjct: 523 REKEEEMAKKREEERQRKER 542
Score = 32.3 bits (70), Expect = 0.056
Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R E+ R + ++E ++R++ A E + ++E R+ + + R ++ ++E+
Sbjct: 610 RREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREE 669
Query: 183 -RNRRRKKTAIAEERRLQSPKKED 251
R R + AEE R + ++E+
Sbjct: 670 ERKREEEAAKRAEEERRKKEEEEE 693
Score = 31.9 bits (69), Expect = 0.074
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKK--EDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
RK+ +RR + KK E+ + RK+ E+ + + K E +R+++ + +RR
Sbjct: 492 RKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRRE 551
Query: 185 QSPKK--EDCNRRRKKTAIAEERRLQSPKKE 271
+ +K E+ R+R++ EE + ++E
Sbjct: 552 EQERKRREEEARKREEERKREEEMAKRREQE 582
Score = 31.5 bits (68), Expect = 0.097
Identities = 19/92 (20%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIA-IAEERKLQSPKNENCNRRRKKTAIAEERR 181
R+R++ EE ++ ++E+ ++R++ A A +R+ + K E ++R++ +ER
Sbjct: 486 RKREEERKREEE--EAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKERE 543
Query: 182 PQSPKKEDCNRRRKKTAIAEERRLQSPKKEDL 277
K+ + R+++ A +R + ++E++
Sbjct: 544 EVERKRREEQERKRREEEARKREEERKREEEM 575
Score = 31.5 bits (68), Expect = 0.097
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R EER Q ++E+ R+R++ + R ++ K+E +R + A E+ Q ++E+
Sbjct: 533 REEER--QRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREE 590
Query: 183 RNRR------RKKTAIAEERRLQSPKKED 251
R+ RK+ +RR Q +K++
Sbjct: 591 VERKIREEQERKREEEMAKRREQERQKKE 619
Score = 31.5 bits (68), Expect = 0.097
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 RGEERRLQSP--KKEDCNRRRKKTAIAEE--RRLQSPKKEN--CNRRRMKTAIAEERRLQ 164
R EER+ + K+ + R+RK+ E R Q K+E RR + E ++
Sbjct: 565 REEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEME 624
Query: 165 SPKKEDRNRRRKK--TAIAEERRLQSPKKED 251
K+E+ R+R++ I EE R Q ++ED
Sbjct: 625 RKKREEEARKREEEMAKIREEER-QRKERED 654
Score = 31.5 bits (68), Expect = 0.097
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 33 KKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAI 212
++E+ +RR++ +ER KK R+ + +A+ R + +KE + RK+
Sbjct: 603 REEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREE 662
Query: 213 AEERRLQSPKKED 251
RR + K+E+
Sbjct: 663 EAMRREEERKREE 675
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/81 (19%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEER-RLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTA 186
++E+ RRRK+ A +R + ++E+ RR ++ ++ + + +K + R+R++
Sbjct: 439 EEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEE 498
Query: 187 IAEERRLQSPKKEDCNRRRKK 249
+ ++E+ + RK+
Sbjct: 499 AKRREEERKKREEEAEQARKR 519
Score = 30.7 bits (66), Expect = 0.17
Identities = 21/90 (23%), Positives = 44/90 (48%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R + I EE+ + ++E+ +RR++ +ER+ K R+++ +A+ R
Sbjct: 588 REEVERKIREEQ--ERKREEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREE 645
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKED 274
+ +KE + RK+ RR + K+E+
Sbjct: 646 ERQRKEREDVERKRREEEAMRREEERKREE 675
Score = 30.7 bits (66), Expect = 0.17
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKK--TAIAEERRLQSPKKENCNRRRMKTAIAEE----RRLQSP 170
E ++ K+E+ R+R++ I EE R + +++ +RR + A+ E R ++
Sbjct: 619 EREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAA 678
Query: 171 KKEDRNRRRKKTAIAEERRLQSPK 242
K+ + RR+K+ EE+R P+
Sbjct: 679 KRAEEERRKKEE--EEEKRRWPPQ 700
Score = 30.3 bits (65), Expect = 0.22
Identities = 14/93 (15%), Positives = 43/93 (46%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
RK+ E+ + K+E+ +R+++ + +R+ + + RK+ + +
Sbjct: 517 RKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMA 576
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
++E +R+++ + + R + +K + + K
Sbjct: 577 KRREQERQRKEREEVERKIREEQERKREEEMAK 609
Score = 30.3 bits (65), Expect = 0.22
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTA-IAEERR 181
+RR++ +ER K + R+++ +A+ R+ + K E RKK A +R
Sbjct: 577 KRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKRE 636
Query: 182 PQSPKKEDCNRRRKKTAIAEERR 250
+ K + R+RK+ E +R
Sbjct: 637 EEMAKIREEERQRKEREDVERKR 659
Score = 29.5 bits (63), Expect = 0.39
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKK---EDCNRRRKK 180
K+E+ R+R++ EE ++ ++E+ RKK E K + +K E+ RR ++
Sbjct: 448 KEEEEARKREEAKRREEE--EAKRREEEETERKKREEEEARKREEERKREEEEAKRREEE 505
Query: 181 TAIAEERRLQSPKKED 228
EE Q+ K+E+
Sbjct: 506 RKKREEEAEQARKREE 521
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 EAKKED--CNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRK 177
E K+E+ RR ++ E ++ +E+ R+R++ + + K+ + R+K
Sbjct: 568 ERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKK 627
Query: 178 KTAIAEERRLQSPKKEDCNRRRKK 249
+ A +R + K + R+RK+
Sbjct: 628 REEEARKREEEMAKIREEERQRKE 651
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/63 (19%), Positives = 31/63 (49%)
Frame = +2
Query: 101 EERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQ 280
EE +++ + E R+++ A E ++E+ R+K+ +R + K+E+ +
Sbjct: 439 EEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEE 498
Query: 281 SPK 289
+ +
Sbjct: 499 AKR 501
Score = 25.8 bits (54), Expect = 4.8
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 55 EERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCN 234
EER+ + ++E+ RRRK+ EE ++ K+E+ RR ++ A E KK +
Sbjct: 433 EERKRR--EEEEIERRRKE----EE---EARKREEAKRREEEEAKRREEEETERKKREEE 483
Query: 235 RRRKK 249
RK+
Sbjct: 484 EARKR 488
>At1g13650.2 68414.m01605 expressed protein
Length = 286
Score = 41.1 bits (92), Expect = 1e-04
Identities = 33/91 (36%), Positives = 46/91 (50%)
Frame = +2
Query: 17 KTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPK 196
+ IAEER+++ K E R++K AEE +L+ K E R K AEE + + K
Sbjct: 189 RMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRKEK 242
Query: 197 KEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
E+ R IAEER+L+ K E Q K
Sbjct: 243 AEETQLR---MVIAEERQLRKEKDEKRQLRK 270
Score = 37.1 bits (82), Expect = 0.002
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
+ EE +L+ K E+ R K AEE +L +KE +++ IAEER+L+ K E
Sbjct: 212 KAEESQLREVKAEETQLRMVK---AEETQL---RKEKAEETQLRMVIAEERQLRKEKDEK 265
Query: 183 RNRRRKK 203
R R+ K
Sbjct: 266 RQLRKGK 272
Score = 34.7 bits (76), Expect = 0.010
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
+ +K+ + + + AEE +L+ K E+ R K AEE +L+ K E+ R
Sbjct: 197 KVRKDKAEKTQLRKEKAEESQLREVKAEETQLRMVK---AEETQLRKEKAEETQLRM--- 250
Query: 184 AIAEERRLQSPKKEDCNRRRKK 249
IAEER+L+ K E R+ K
Sbjct: 251 VIAEERQLRKEKDEKRQLRKGK 272
Score = 33.9 bits (74), Expect = 0.018
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
+ E+ +L+ K E+ R K AEE +L+ K E R+ K AEE +L+ E+
Sbjct: 202 KAEKTQLRKEKAEESQLREVK---AEETQLRMVKAEETQLRKEK---AEETQLRMVIAEE 255
Query: 183 RNRRRKKTAIAEERRLQSPKK 245
R R++K E+R+L+ KK
Sbjct: 256 RQLRKEKD---EKRQLRKGKK 273
Score = 28.7 bits (61), Expect = 0.69
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 126 RMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKED 251
+++ IAEER+++ K E R++K AEE +L+ K E+
Sbjct: 187 QLRMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEE 225
>At1g13650.1 68414.m01604 expressed protein
Length = 281
Score = 41.1 bits (92), Expect = 1e-04
Identities = 33/91 (36%), Positives = 46/91 (50%)
Frame = +2
Query: 17 KTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPK 196
+ IAEER+++ K E R++K AEE +L+ K E R K AEE + + K
Sbjct: 184 RMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRKEK 237
Query: 197 KEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
E+ R IAEER+L+ K E Q K
Sbjct: 238 AEETQLR---MVIAEERQLRKEKDEKRQLRK 265
Score = 37.1 bits (82), Expect = 0.002
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
+ EE +L+ K E+ R K AEE +L +KE +++ IAEER+L+ K E
Sbjct: 207 KAEESQLREVKAEETQLRMVK---AEETQL---RKEKAEETQLRMVIAEERQLRKEKDEK 260
Query: 183 RNRRRKK 203
R R+ K
Sbjct: 261 RQLRKGK 267
Score = 34.7 bits (76), Expect = 0.010
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
+ +K+ + + + AEE +L+ K E+ R K AEE +L+ K E+ R
Sbjct: 192 KVRKDKAEKTQLRKEKAEESQLREVKAEETQLRMVK---AEETQLRKEKAEETQLRM--- 245
Query: 184 AIAEERRLQSPKKEDCNRRRKK 249
IAEER+L+ K E R+ K
Sbjct: 246 VIAEERQLRKEKDEKRQLRKGK 267
Score = 33.9 bits (74), Expect = 0.018
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
+ E+ +L+ K E+ R K AEE +L+ K E R+ K AEE +L+ E+
Sbjct: 197 KAEKTQLRKEKAEESQLREVK---AEETQLRMVKAEETQLRKEK---AEETQLRMVIAEE 250
Query: 183 RNRRRKKTAIAEERRLQSPKK 245
R R++K E+R+L+ KK
Sbjct: 251 RQLRKEKD---EKRQLRKGKK 268
Score = 28.7 bits (61), Expect = 0.69
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 126 RMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKED 251
+++ IAEER+++ K E R++K AEE +L+ K E+
Sbjct: 182 QLRMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEE 220
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 40.7 bits (91), Expect = 2e-04
Identities = 27/92 (29%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
R++ +ER+ + K+++ R+RKK EE + + +++ RR + A+ E RR Q
Sbjct: 486 RREREKEKERQYEKEKEKEKERKRKKEIRYEEEEEED--DDDSRRRWHRAALDERRRRQL 543
Query: 191 PKKED--CNRRRKKTAIAEERRLQSPKKEDLQ 280
+KED +R +++ +AE +R S ++++LQ
Sbjct: 544 REKEDDLADRLKEEEEVAEAKR--SAEEQNLQ 573
Score = 37.5 bits (83), Expect = 0.001
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED-- 182
+ER+ + K+++ R+RKK EE + ++ RR + A+ E RR Q +KED
Sbjct: 493 KERQYEKEKEKEKERKRKKEIRYEEE--EEEDDDDSRRRWHRAALDERRRRQLREKEDDL 550
Query: 183 RNRRRKKTAIAEERR 227
+R +++ +AE +R
Sbjct: 551 ADRLKEEEEVAEAKR 565
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 4 EAKKEDCNRRR-KKTAIAEERRLQSPKKED--CNRRRKKTAIAE 126
E + +D +RRR + A+ E RR Q +KED +R +++ +AE
Sbjct: 519 EEEDDDDSRRRWHRAALDERRRRQLREKEDDLADRLKEEEEVAE 562
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 38.7 bits (86), Expect = 6e-04
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
K++ +++KK EE + + P K+ N +KKT AE + P K++ ++RK
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSN--KKKTE-AEPETAEEPAKKEKKKKRKHE-- 509
Query: 190 AEERRLQSPKKEDCNRRRKK 249
EE + + KKE +++KK
Sbjct: 510 EEETEMPAKKKEKSEKKKKK 529
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/72 (26%), Positives = 39/72 (54%)
Frame = +3
Query: 33 KKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAI 212
K++ +++KK EE + + P K+ N+++ + AE + P K+++ ++RK
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNKKKTE---AEPETAEEPAKKEKKKKRKHE-- 509
Query: 213 AEERRLQSPKKE 248
EE + + KKE
Sbjct: 510 EEETEMPAKKKE 521
Score = 34.3 bits (75), Expect = 0.014
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
+++KK EE + + P K+ N+++ + AE + P + ++RK EE
Sbjct: 461 KKKKKADDEEEAKTEEPSKKKSNKKKTE---AEPETAEEPAKKEKKKKRKHE--EEETEM 515
Query: 185 QSPKKEDCNRRRKK 226
+ KKE +++KK
Sbjct: 516 PAKKKEKSEKKKKK 529
Score = 33.9 bits (74), Expect = 0.018
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = +2
Query: 56 KKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAI 235
K++ +++KK EE K + P + N+ KKT E + KKE +R+ +
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNK--KKTEAEPETAEEPAKKEKKKKRKHE--- 509
Query: 236 AEERRLQSPKKEDLQSPK 289
EE + + KKE + K
Sbjct: 510 EEETEMPAKKKEKSEKKK 527
Score = 33.1 bits (72), Expect = 0.032
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
EE + + P K+ N+ KKT E + KKE +R+ + EE + + KKE
Sbjct: 470 EEAKTEEPSKKKSNK--KKTEAEPETAEEPAKKEKKKKRKHE---EEETEMPAKKKEKSE 524
Query: 189 RRRKK 203
+++KK
Sbjct: 525 KKKKK 529
Score = 32.7 bits (71), Expect = 0.042
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 EAKKEDCNRRR--KKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRK 177
EAK E+ ++++ KK AE + P K++ ++RK EE ++ + KKE +++K
Sbjct: 471 EAKTEEPSKKKSNKKKTEAEPETAEEPAKKEKKKKRKHEE--EETEMPAKKKEKSEKKKK 528
Query: 178 K 180
K
Sbjct: 529 K 529
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 38.7 bits (86), Expect = 6e-04
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 AKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTA 186
AK E+ ++++ K + + ++E +++KK A AE + KE+ + +KK
Sbjct: 449 AKSEEPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRK 508
Query: 187 IAEERRLQSP-KKEDCNRRRKKT 252
EE ++P KK+D ++KK+
Sbjct: 509 HEEEETTETPAKKKDKKEKKKKS 531
Score = 35.9 bits (79), Expect = 0.005
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 47 QSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKK 226
+ P K+ +++KK+ EE K + + E +++KK A AE KE+ + +KK
Sbjct: 452 EEPSKKKDKKKKKKV---EEEKPE--EEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKK 506
Query: 227 TAIAEERRLQSP-KKEDLQSPK 289
EE ++P KK+D + K
Sbjct: 507 RKHEEEETTETPAKKKDKKEKK 528
Score = 35.1 bits (77), Expect = 0.008
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQ 187
++KK + EE+ ++E +++KK A AE + E + +KK EE +
Sbjct: 460 KKKKKKVEEEK---PEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRKHEEEETTE 516
Query: 188 SP-KKEDCNRRRKKT 229
+P KK+D ++KK+
Sbjct: 517 TPAKKKDKKEKKKKS 531
Score = 34.3 bits (75), Expect = 0.014
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKT 206
S K E+ ++++ K + + ++E +++ K A AE + KE++ + +KK
Sbjct: 448 SAKSEEPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKR 507
Query: 207 AIAEERRLQSP-KKED 251
EE ++P KK+D
Sbjct: 508 KHEEEETTETPAKKKD 523
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKK 157
+++KK A AE + KE+ + +KK EE ++P + + +KK
Sbjct: 479 KKKKKKAEAETEAVVEVAKEEKKKNKKKRKHEEEETTETPAKKKDKKEKKK 529
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +2
Query: 110 KLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
K + P + +++KK EE +P+ ++E +++KK A AE + KE+ + K
Sbjct: 450 KSEEPSKKKDKKKKKKV---EEEKPE--EEEPSEKKKKKKAEAETEAVVEVAKEEKKKNK 504
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 37.5 bits (83), Expect = 0.001
Identities = 23/88 (26%), Positives = 48/88 (54%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQ 187
++++ +EER+ + K+E + + KK EE + ++EN ++ +KK E +
Sbjct: 1036 KKREEKDSEERKSKKEKEESRDLKAKK---KEEETKEKKESEN-HKSKKKEDKKEHEDNK 1091
Query: 188 SPKKEDCNRRRKKTAIAEERRLQSPKKE 271
S KKE+ + +KK ++ R+ + KK+
Sbjct: 1092 SMKKEEDKKEKKKHEESKSRKKEEDKKD 1119
Score = 34.3 bits (75), Expect = 0.014
Identities = 24/101 (23%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENC-----NRRRKKTAIA 169
+++K++ + ++ + KKE N KK E+ K ++ K+EN N+ K+ +
Sbjct: 946 KKKKESKNSNMKKKEEDKKEYVNNELKK---QEDNKKETTKSENSKLKEENKDNKEKKES 1002
Query: 170 EERRPQSPKKEDCNRRRKKT---AIAEERRLQSPKKEDLQS 283
E+ ++ +K++ ++ KT A E+++ Q K+E+ S
Sbjct: 1003 EDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDS 1043
Score = 34.3 bits (75), Expect = 0.014
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
KK+ EE + + K +D R K +EERK + K E+ + + KK EE +
Sbjct: 1018 KKSKTKEEAKKEKKKSQDKKREEKD---SEERKSKKEKEESRDLKAKKK---EEETKE-- 1069
Query: 194 KKEDCNRRRKKTAIAEERR-LQSPKKEDLQSPK 289
KKE N + KK +E +S KKE+ + K
Sbjct: 1070 KKESENHKSKKKEDKKEHEDNKSMKKEEDKKEK 1102
Score = 34.3 bits (75), Expect = 0.014
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
T+ +K++ + ++ + K+ + N+ KK +E+K KK E +
Sbjct: 1067 TKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQ 1126
Query: 182 PQSPKKEDCNRRRKKTAIAEERRLQSPKKE 271
+ KKED N ++K + ++ +S KKE
Sbjct: 1127 NSNKKKEDKNEKKKSQHVKLVKK-ESDKKE 1155
Score = 33.5 bits (73), Expect = 0.024
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
EER+ + K+E + + KK EE + + EN ++ + K E +S KKE+
Sbjct: 1044 EERKSKKEKEESRDLKAKKK---EEETKEKKESEN-HKSKKKEDKKEHEDNKSMKKEEDK 1099
Query: 189 RRRKKTAIAEERRLQSPKKE 248
+ +KK ++ R+ + KK+
Sbjct: 1100 KEKKKHEESKSRKKEEDKKD 1119
Score = 33.1 bits (72), Expect = 0.032
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPK--KEDCNRRRK 177
E KKE K+ EE + K ED N +KK E+ K Q K K++ +++ K
Sbjct: 1097 EDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEK 1156
Query: 178 K--TAIAEERRLQSPK--KEDCNRRRKKT 252
K +E + ++S K K + +++ KK+
Sbjct: 1157 KENEEKSETKEIESSKSQKNEVDKKEKKS 1185
Score = 32.3 bits (70), Expect = 0.056
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
+KK+ + + +S KKE +K E +S KNE +++ KK++ ++++ +
Sbjct: 1138 KKKSQHVKLVKKESDKKEK-KENEEKSETKEIESSKSQKNE-VDKKEKKSSKDQQKKKEK 1195
Query: 191 PKKEDCNRR-------RKKTAIAEERRLQSPKKEDLQSPK 289
KE ++ RKK EE + Q K++ PK
Sbjct: 1196 EMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPK 1235
Score = 31.9 bits (69), Expect = 0.074
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
++KKE R K EE + + E+ ++ +KK E +S KKE+ + +KK
Sbjct: 1047 KSKKEKEESRDLKAKKKEEETKEKKESEN-HKSKKKEDKKEHEDNKSMKKEEDKKEKKKH 1105
Query: 184 AIAEERRLQSPKK-----EDCNRRRKK 249
++ R+ + KK ED N +KK
Sbjct: 1106 EESKSRKKEEDKKDMEKLEDQNSNKKK 1132
Score = 31.9 bits (69), Expect = 0.074
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
KKE+ + +K++ + ++ + K+ + N+ KK EE K + K E+ R+K+
Sbjct: 1062 KKEEETKEKKESENHKSKKKEDKKEHEDNKSMKK----EEDKKEKKKHEESKSRKKEEDK 1117
Query: 190 AEERRLQ---SPKKEDCNRRRKKT 252
+ +L+ S KK++ +KK+
Sbjct: 1118 KDMEKLEDQNSNKKKEDKNEKKKS 1141
Score = 31.5 bits (68), Expect = 0.097
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
T + + + + EE + KKE + K E + +S E + +KK+ +++R
Sbjct: 981 TTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKS--QDKKR 1038
Query: 182 PQSPKKEDCNRRRKKTAIAEERRLQSPKKED 274
+++D R+ K E R L++ KKE+
Sbjct: 1039 ----EEKDSEERKSKKEKEESRDLKAKKKEE 1065
Score = 31.5 bits (68), Expect = 0.097
Identities = 19/80 (23%), Positives = 43/80 (53%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
+E +S KE + + +K + ++ + S ++ + MK + EE++L K++
Sbjct: 1157 KENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKES--EEKKL----KKNEE 1210
Query: 189 RRRKKTAIAEERRLQSPKKE 248
R+K+T++ E ++ + KKE
Sbjct: 1211 DRKKQTSVEENKKQKETKKE 1230
Score = 31.1 bits (67), Expect = 0.13
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKN-----ENCNRRRKKTAIA 169
+ +KK E +S KKE+ + +KK ++ RK + K E+ N +KK
Sbjct: 1077 KSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKN 1136
Query: 170 EERRPQSPK--KEDCNRRRKK--TAIAEERRLQSPKKE 271
E+++ Q K K++ +++ KK +E + ++S K +
Sbjct: 1137 EKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQ 1174
Score = 31.1 bits (67), Expect = 0.13
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
+ ++ + K+ + N+ KK +E++ K K E + + KKED+N
Sbjct: 1077 KSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKN 1136
Query: 189 RRRKKTAIAEERRLQSPKKE 248
++K + ++ +S KKE
Sbjct: 1137 EKKKSQHVKLVKK-ESDKKE 1155
Score = 30.7 bits (66), Expect = 0.17
Identities = 20/84 (23%), Positives = 41/84 (48%)
Frame = +1
Query: 1 HEAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKK 180
++ KKE + K E +S KE+ + +KK+ + + +++D R+ K
Sbjct: 996 NKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKS------QDKKREEKDSEERKSK 1049
Query: 181 TAIAEERRLQSPKKEDCNRRRKKT 252
E R L++ KKE+ + +K++
Sbjct: 1050 KEKEESRDLKAKKKEEETKEKKES 1073
Score = 30.7 bits (66), Expect = 0.17
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
E +S KE+ + +KK+ +++R + +E R+ K E R L++ KKE+
Sbjct: 1014 EYEEKKSKTKEEAKKEKKKS--QDKKREEKDSEE----RKSKKEKEESRDLKAKKKEEET 1067
Query: 189 RRRKKTAIAEERRLQSPKKED 251
+ +K E +S KKED
Sbjct: 1068 KEKK-----ESENHKSKKKED 1083
Score = 30.7 bits (66), Expect = 0.17
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
EE + + K +D R K + EER+ + K+E+ R +K EE + KKE N
Sbjct: 1024 EEAKKEKKKSQDKKREEKDS---EERKSKKEKEES---RDLKAKKKEEETKE--KKESEN 1075
Query: 189 RRRKKTAIAEERR-LQSPKKED 251
+ KK +E +S KKE+
Sbjct: 1076 HKSKKKEDKKEHEDNKSMKKEE 1097
Score = 29.9 bits (64), Expect = 0.30
Identities = 16/85 (18%), Positives = 35/85 (41%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNR 214
+++ Q+ + D + + +I + + + S + + K I + Q+ + +
Sbjct: 1262 QQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEE 1321
Query: 215 RRKKTAIAEERRLQSPKKEDLQSPK 289
RKK E + Q KE+ PK
Sbjct: 1322 DRKKQTSVAENKKQKETKEEKNKPK 1346
Score = 29.9 bits (64), Expect = 0.30
Identities = 16/85 (18%), Positives = 35/85 (41%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNR 214
+++ Q+ + D + + +I + + + S + + K I + Q+ + +
Sbjct: 1373 QQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEE 1432
Query: 215 RRKKTAIAEERRLQSPKKEDLQSPK 289
RKK E + Q KE+ PK
Sbjct: 1433 DRKKQTSVAENKKQKETKEEKNKPK 1457
Score = 29.1 bits (62), Expect = 0.52
Identities = 23/97 (23%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
++ R+K E++ S KE+ + +KK ++++K + +E R+ K E R
Sbjct: 1007 SKNREKKEYEEKK---SKTKEEAKKEKKK---SQDKKREEKDSE---ERKSKKEKEESRD 1057
Query: 182 PQSPKKEDCNRRRKKTAIAEERRLQSPKK-EDLQSPK 289
++ KKE+ + +K++ + ++ + K+ ED +S K
Sbjct: 1058 LKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMK 1094
Score = 29.1 bits (62), Expect = 0.52
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = +2
Query: 50 SPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKT 229
S + D + + +I + + + + +N N R+K+T++AE ++ + K+E + K
Sbjct: 1403 SDSQADSDESKNEILMQADSQATTQRN-NEEDRKKQTSVAENKKQKETKEEKNKPKDDKK 1461
Query: 230 AIAEERRLQSPKKEDLQS 283
E+ KKE ++S
Sbjct: 1462 NTTEQ---SGGKKESMES 1476
Score = 28.7 bits (61), Expect = 0.69
Identities = 21/93 (22%), Positives = 41/93 (44%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
+K+ E ++ + KKE K + EE K K E+ + K E +S
Sbjct: 963 KKEYVNNELKKQEDNKKETTKSENSK--LKEENKDNKEKKESEDSASKNREKKEYEEKKS 1020
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
KE+ + +KK +++++ + E+ +S K
Sbjct: 1021 KTKEEAKKEKKK---SQDKKREEKDSEERKSKK 1050
Score = 28.7 bits (61), Expect = 0.69
Identities = 18/84 (21%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +3
Query: 12 ERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKE---- 179
+++ + K+ ++ K+ +EE++L K+N R+ +T++ E ++ + KKE
Sbjct: 1179 DKKEKKSSKDQQKKKEKEMKESEEKKL----KKNEEDRKKQTSVEENKKQKETKKEKNKP 1234
Query: 180 -DRNRRRKKTAIAEERRLQSPKKE 248
D + K + ++ ++S KE
Sbjct: 1235 KDDKKNTTKQSGGKKESMESESKE 1258
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/81 (20%), Positives = 41/81 (50%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
E ++ + KKE T +E +L+ K+N ++ + + ++ R + + E++
Sbjct: 970 ELKKQEDNKKE--------TTKSENSKLKEENKDNKEKKESEDSASKNR--EKKEYEEKK 1019
Query: 189 RRRKKTAIAEERRLQSPKKED 251
+ K+ A E+++ Q K+E+
Sbjct: 1020 SKTKEEAKKEKKKSQDKKREE 1040
>At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
K ++AEE+R S K ++ KK+ +E ++ + KN CN K ++ E++ +
Sbjct: 174 KALSVAEEKRDGSEKPRSDSKVEKKLEESETQE-EIVKNHKCNSGSKDNSLISEQKQEEN 232
Query: 194 KKEDCNRRRKKTAIAEE 244
KE C KT + +E
Sbjct: 233 DKE-CPASMAKTFVVQE 248
>At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
K ++AEE+R S K ++ KK+ +E ++ + KN CN K ++ E++ +
Sbjct: 174 KALSVAEEKRDGSEKPRSDSKVEKKLEESETQE-EIVKNHKCNSGSKDNSLISEQKQEEN 232
Query: 194 KKEDCNRRRKKTAIAEE 244
KE C KT + +E
Sbjct: 233 DKE-CPASMAKTFVVQE 248
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 884
Score = 34.7 bits (76), Expect = 0.010
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R ER ++ KED +R++K EE R + + EN ++ + + + K++
Sbjct: 776 RDVERPHRTNSKEDRGKRKEKE--KEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKS 833
Query: 183 RNRRR--KKTAIAEERRLQSPKKED 251
R+RRR + + R+ SP ++
Sbjct: 834 RSRRRSVSPSPVRSRRKRSSPSSDE 858
Score = 32.7 bits (71), Expect = 0.042
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNR-RRKKTAIAEERRPQS 190
KK + ER ++ KED +R++K EE + + + EN ++ +R+++ + E S
Sbjct: 772 KKDSRDVERPHRTNSKEDRGKRKEK--EKEEERSRHRRAENSSKDKRRRSPTSNESSDDS 829
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKEDLQS 283
+K RR + RR +S D S
Sbjct: 830 KRKSRSRRRSVSPSPVRSRRKRSSPSSDESS 860
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
E+ K+ + KK + ER ++ KED +R++K EE + + + E+ ++ +++
Sbjct: 761 ESNKKSTDPHVKKDSRDVERPHRTNSKEDRGKRKEKE--KEEERSRHRRAENSSKDKRRR 818
Query: 184 AIAEERRLQSPKKEDCNRRR 243
+ K++ +RRR
Sbjct: 819 SPTSNESSDDSKRKSRSRRR 838
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAEERRLQSPKKEDCNR-RRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
KED +R++K EE R + + E+ ++ +R+++ + E S +K RR +
Sbjct: 787 KEDRGKRKEKE--KEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSP 844
Query: 190 AEERRLQSPKKED 228
RR +S D
Sbjct: 845 VRSRRKRSSPSSD 857
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/85 (21%), Positives = 33/85 (38%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQ 187
+RK+ EER + +R++ + E S + RR + RR +
Sbjct: 792 KRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKR 851
Query: 188 SPKKEDCNRRRKKTAIAEERRLQSP 262
S D + K + +R+ +SP
Sbjct: 852 SSPSSDESSDDSKRKSSSKRKNRSP 876
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 34.7 bits (76), Expect = 0.010
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R ER ++ KED +R++K EE R + + EN ++ + + + K++
Sbjct: 746 RDVERPHRTNSKEDRGKRKEKE--KEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKS 803
Query: 183 RNRRR--KKTAIAEERRLQSPKKED 251
R+RRR + + R+ SP ++
Sbjct: 804 RSRRRSVSPSPVRSRRKRSSPSSDE 828
Score = 32.7 bits (71), Expect = 0.042
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNR-RRKKTAIAEERRPQS 190
KK + ER ++ KED +R++K EE + + + EN ++ +R+++ + E S
Sbjct: 742 KKDSRDVERPHRTNSKEDRGKRKEK--EKEEERSRHRRAENSSKDKRRRSPTSNESSDDS 799
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKEDLQS 283
+K RR + RR +S D S
Sbjct: 800 KRKSRSRRRSVSPSPVRSRRKRSSPSSDESS 830
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
E+ K+ + KK + ER ++ KED +R++K EE + + + E+ ++ +++
Sbjct: 731 ESNKKSTDPHVKKDSRDVERPHRTNSKEDRGKRKEKE--KEEERSRHRRAENSSKDKRRR 788
Query: 184 AIAEERRLQSPKKEDCNRRR 243
+ K++ +RRR
Sbjct: 789 SPTSNESSDDSKRKSRSRRR 808
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAEERRLQSPKKEDCNR-RRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
KED +R++K EE R + + E+ ++ +R+++ + E S +K RR +
Sbjct: 757 KEDRGKRKEKE--KEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSP 814
Query: 190 AEERRLQSPKKED 228
RR +S D
Sbjct: 815 VRSRRKRSSPSSD 827
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/85 (21%), Positives = 33/85 (38%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQ 187
+RK+ EER + +R++ + E S + RR + RR +
Sbjct: 762 KRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKR 821
Query: 188 SPKKEDCNRRRKKTAIAEERRLQSP 262
S D + K + +R+ +SP
Sbjct: 822 SSPSSDESSDDSKRKSSSKRKNRSP 846
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 34.3 bits (75), Expect = 0.014
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKK---EDCNRRRKKIA----IAEERKLQSPKNENCNRRRKKTAIAE 172
+K+A +ER+ + KK ED ++K+ AE ++ + K+E+ ++K + +
Sbjct: 177 QKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKNKDEDVVDEKEKEKLED 236
Query: 173 ERRPQSPKKEDCNRRRK-KTAIAEERRLQSPKKED 274
E+R KKE +R+ + ++EER+ + +K D
Sbjct: 237 EQRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSD 271
Score = 32.7 bits (71), Expect = 0.042
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRM-KTAIAEERRLQSPKKEDR 185
E + + K ED ++K + +E+R KKE +R+ + ++EER+ + +K D
Sbjct: 213 EIKEKKKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSDE 272
Query: 186 NRRRKKTAIAEERRLQ 233
++ ++R+L+
Sbjct: 273 EMGSEERKSKKKRKLK 288
Score = 29.5 bits (63), Expect = 0.39
Identities = 17/77 (22%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 29 AEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRK-KTAIAEERRPQSPKKED 205
AE + + K ED ++K + +E++ K E +R+ + ++EER+ + +K D
Sbjct: 212 AEIKEKKKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSD 271
Query: 206 CNRRRKKTAIAEERRLQ 256
++ ++R+L+
Sbjct: 272 EEMGSEERKSKKKRKLK 288
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +3
Query: 18 RLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRR 197
+L++ ++ + R RKK E+++ ++ K E+ ++K + +E+ K DR R+
Sbjct: 136 KLEAEQRSEERRERKK----EKKKKKNNKDEDVVDEKVKEKLEDEQ-----KSADRKERK 186
Query: 198 KK 203
KK
Sbjct: 187 KK 188
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 33.9 bits (74), Expect = 0.018
Identities = 25/88 (28%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIA----EERRLQSPKK 176
E R +++ +K + R+ K+ E + ++ +KE NRR M+ A A +ERR++ ++
Sbjct: 687 ERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENRR-MREAFALEQEKERRIKEARE 745
Query: 177 EDRNRRRKKTAIAE---ERRLQSPKKED 251
++ N RR K A + E+RL++ +++
Sbjct: 746 KEENERRIKEAREKAELEQRLKATLEQE 773
Score = 32.3 bits (70), Expect = 0.056
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
E K+ R+K A E R +++ +K + R+ K+ E ++ +KE+ NRR ++
Sbjct: 671 EEKERKIKEAREK-AENERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENRRMREA 729
Query: 184 AIAE---ERRLQSPKKEDCNRRRKK 249
E ERR++ ++++ N RR K
Sbjct: 730 FALEQEKERRIKEAREKEENERRIK 754
Score = 31.5 bits (68), Expect = 0.097
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAE---ERRLQSPKKENCNRRRMK-TAIAEERRLQSPKK 176
+ER+++ ++ + N RR K + + ER+L+ ++ N RR+K T EE + + +
Sbjct: 775 KERQIKERQEREENERRAKEVLEQAENERKLKEALEQKENERRLKETREKEENKKKLREA 834
Query: 177 EDRNRRRKKTAIAEER-RLQSPKKED 251
+ + K+ A ER ++ KED
Sbjct: 835 IELEEKEKRLIEAFERAEIERRLKED 860
Score = 30.3 bits (65), Expect = 0.22
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Frame = +3
Query: 12 ERRLQSPKKEDCNRRRKKTA---IAEERRLQSPKKENCNRRRMKTAIAEERRLQSP-KKE 179
E+RL++ +++ R+ K A ERR +++ R+MK E +L+ +KE
Sbjct: 661 EKRLKAALEQEEKERKIKEAREKAENERRAVEAREKAEQERKMKEQQELELQLKEAFEKE 720
Query: 180 DRNRRRKKTAIAE---ERRLQSPKKED 251
+ NRR ++ E ERR++ ++++
Sbjct: 721 EENRRMREAFALEQEKERRIKEAREKE 747
Score = 28.3 bits (60), Expect = 0.91
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Frame = +3
Query: 12 ERRLQSP-KKEDCNRRRKKTAIAEE--RRLQSPKKENCNRRRMKTAIAE---ERRLQSPK 173
E +L P K+ + R K+ + EE RR + ++ N +R+K A+ + ER+++ +
Sbjct: 622 ETKLNEPLKRMEEETRIKEARLREENDRRERVAVEKAENEKRLKAALEQEEKERKIKEAR 681
Query: 174 KEDRNRRRKKTA--IAEERRLQSPKKE 248
++ N RR A AE+ R ++E
Sbjct: 682 EKAENERRAVEAREKAEQERKMKEQQE 708
Score = 27.1 bits (57), Expect = 2.1
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Frame = +3
Query: 9 EERRLQSP--KKEDCNRRRKKTAIAEE--RRLQSPKKENCNRRRMKTAIAE---ERRLQS 167
E RR++ +++ RR K+ EE RR++ +++ +R+K + + ER+++
Sbjct: 722 ENRRMREAFALEQEKERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEKERQIKE 781
Query: 168 PKKEDRNRRRKKTAIAE---ERRLQ 233
++ + N RR K + + ER+L+
Sbjct: 782 RQEREENERRAKEVLEQAENERKLK 806
>At2g33435.1 68415.m04098 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 979
Score = 33.9 bits (74), Expect = 0.018
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +2
Query: 59 KEDCNRRRKKIAIAEERKLQSPKNENC--NRRRKKTAIAEERRPQSPKKEDCNRRRKK-- 226
K+ ++ + I+ + E L K + NR+RK +S ++ +RR KK
Sbjct: 519 KDSSRKKEEAISSSREENLDKQKKDESTSNRKRKAEGECSTAETESIEEHSKDRRGKKEE 578
Query: 227 --TAIAEERRLQSPKKEDLQS 283
+ EERR + KKEDL S
Sbjct: 579 TNSNCREERRDKKMKKEDLAS 599
Score = 33.5 bits (73), Expect = 0.024
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAE--E*KLQSPKKEDCNRRRK 177
E K+ ++ + + + E L KK++ RK+ A E + +S ++ +RR K
Sbjct: 516 ERVKDSSRKKEEAISSSREENLDKQKKDESTSNRKRKAEGECSTAETESIEEHSKDRRGK 575
Query: 178 K----TAIAEERRLQSPKKEDCNRRRK 246
K + EERR + KKED RK
Sbjct: 576 KEETNSNCREERRDKKMKKEDLASNRK 602
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 33.5 bits (73), Expect = 0.024
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAE--ERRLQSPKKENCNRR--RMKTAIAEERRLQSPKK 176
+E R + +KE RRR K + ERR S +++ R K + E+ R +
Sbjct: 68 DEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHE 127
Query: 177 EDRNRRRKKTAIAEERRLQSPKKE 248
DR + RK+ EER+ + ++E
Sbjct: 128 RDRGKDRKRDREREERKDKERERE 151
Score = 30.7 bits (66), Expect = 0.17
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRK-KIAIAEERKLQSPKNENCNRR--RKKTAIAEERRPQSPKKE 202
EER + K+ + RR K ++ ER+ S ++ R K + E+ R +
Sbjct: 69 EEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHER 128
Query: 203 DCNRRRKKTAIAEERRLQSPKKE 271
D + RK+ EER+ + ++E
Sbjct: 129 DRGKDRKRDREREERKDKERERE 151
Score = 30.7 bits (66), Expect = 0.17
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAE--ERRLQSPKKEDCNRR--RKKTAIAEE*KLQSPKKEDCNRRRK 177
+KE RRR K + ERR S ++D R K + E+ + + D + RK
Sbjct: 76 EKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGKDRK 135
Query: 178 KTAIAEERRLQSPKKEDCNRRRKK 249
+ EER+ + ++E RR++
Sbjct: 136 RDREREERKDKEREREKDRERRER 159
Score = 28.3 bits (60), Expect = 0.91
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
R K + E+ R + D + RK+ EERK + + E RR++ EER +
Sbjct: 111 RDKRRVNEKERGHREHERDRGKDRKRDREREERKDKEREREKDRERRERE--REEREKER 168
Query: 191 PKKEDCNRRRKKTAIAEER 247
K+ + R ER
Sbjct: 169 VKERERREREDGERDRRER 187
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/84 (20%), Positives = 39/84 (46%)
Frame = +1
Query: 1 HEAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKK 180
H + D + RK+ EER+ + ++E RR++ E + + + ++ RR ++
Sbjct: 123 HREHERDRGKDRKRDREREERKDKEREREKDRERRER----EREEREKERVKERERRERE 178
Query: 181 TAIAEERRLQSPKKEDCNRRRKKT 252
+ R + + NR R+++
Sbjct: 179 DGERDRREREKERGSRRNRERERS 202
Score = 27.5 bits (58), Expect = 1.6
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRR---RKKIAIAEERKLQSPKN----ENCNRRRKKTAIAEERRPQSP 193
+R L+ +KE R+ R+K R SPK +N ++ KKT E Q
Sbjct: 215 KRDLKRRRKEGGERKEKEREKSVGRSSRHEDSPKRKSVEDNGEKKEKKTREEELEDEQKK 274
Query: 194 KKEDCNRRRKKTAIAEERRLQSPKKEDLQS 283
E+ +RR++ + E + L+ KKE+ +S
Sbjct: 275 LDEEVEKRRRR--VQEWQELKR-KKEEAES 301
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
E+ R + D + RK+ EER+ + ++E RR + EER + K+ +R
Sbjct: 118 EKERGHREHERDRGKDRKRDREREERKDKEREREKDRERRERE--REEREKERVKERERR 175
Query: 189 RRRKKTAIAEER 224
R ER
Sbjct: 176 EREDGERDRRER 187
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQ--SPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
++ D + R+ + ER+ S K+ + +RR+K+ ++ + + +D R ++K
Sbjct: 18 EEADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDS-EDDYDRDDDEEREKRKE 76
Query: 184 AIAEERRLQSPKKEDCNRRRKKT 252
E RR + + + RRK +
Sbjct: 77 KERERRRRDKDRVKRRSERRKSS 99
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/76 (19%), Positives = 38/76 (50%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
+RR + + ++ S K+ + +RR+K++ ++ ++++ R ++K E RR
Sbjct: 25 SRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSED-DYDRDDDEEREKRKEKERERRR 83
Query: 182 PQSPKKEDCNRRRKKT 229
+ + + RRK +
Sbjct: 84 RDKDRVKRRSERRKSS 99
Score = 25.0 bits (52), Expect = 8.4
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQ-----SPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIA 169
RRRK+ +E+ + S + ED + +RK + E+K + + E +KK
Sbjct: 220 RRRKEGGERKEKEREKSVGRSSRHED-SPKRKSVEDNGEKKEKKTREEELEDEQKKLDEE 278
Query: 170 EERRPQSPKKEDCNRRRKKTAIAEER 247
E+R + ++ +R+K+ A +E +
Sbjct: 279 VEKRRRRVQEWQELKRKKEEAESESK 304
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 33.1 bits (72), Expect = 0.032
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +2
Query: 26 IAEERRLQSPKKEDCNRRRKKIAIAEE---RKLQSP---KNENCNRRRKKTAIAEERRPQ 187
+ EE R + ++E+ + +K++ +E RKLQ K E R+ ++ A A+E
Sbjct: 134 LLEESRRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAA 193
Query: 188 SPKKEDCNRRRK-KTAIAEERRLQSPKKEDLQ 280
+E+ + K + EERRL+ K ED++
Sbjct: 194 KKLQEEIEAKEKLEERKLEERRLEERKLEDMK 225
>At4g36860.2 68417.m05227 LIM domain-containing protein low
similarity to LIM-domain protein [Branchiostoma
floridae] GI:3360516, DRAL/Slim3/FHL2 [Homo sapiens]
GI:7209525; contains Pfam profile PF00412: LIM domain
Length = 547
Score = 33.1 bits (72), Expect = 0.032
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKK-EDCNRRRKK 180
E + E+ R + + A EERR+ + E+ +RR + + E KL + + E+ RR K
Sbjct: 86 EDEDEEYMRAQLEAAEEEERRVAQAQIEEEEKRRAEAQLEETEKLLAKARLEEEEMRRSK 145
Query: 181 TAIAEERRLQSPKKEDCN 234
+ E+ L +E N
Sbjct: 146 AQLEEDELLAKALQESMN 163
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 17 KTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAE-ERRPQSP 193
K+ E+ + E+ R + + A EER++ + E +RR + + E E+
Sbjct: 75 KSETEEDDDDDEDEDEEYMRAQLEAAEEEERRVAQAQIEEEEKRRAEAQLEETEKLLAKA 134
Query: 194 KKEDCNRRRKKTAIAEERRLQSPKKEDL 277
+ E+ RR K + E+ L +E +
Sbjct: 135 RLEEEEMRRSKAQLEEDELLAKALQESM 162
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 63 KTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRL 230
K+ E+ + E R +++ A EERR+ + E+ +RR + + E +L
Sbjct: 75 KSETEEDDDDDEDEDEEYMRAQLEAAEEEERRVAQAQIEEEEKRRAEAQLEETEKL 130
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 32.7 bits (71), Expect = 0.042
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQ--SPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKK-TAIAE 172
++++KK EE+ + S KKE ++ KK + EE + SPK+E +++ K T A
Sbjct: 476 SKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEE--VASPKSEKKKKKKSKDTEAAV 533
Query: 173 ERRPQSPKKEDCNRRRKK 226
+ +S ++ +++KK
Sbjct: 534 DAEDESAAEKSEKKKKKK 551
Score = 31.5 bits (68), Expect = 0.097
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
T ++ KT E + K +++K +E + S K E ++ KK + EE
Sbjct: 455 TTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEE-- 512
Query: 182 PQSPKKEDCNRRRKK---TAIAEERRLQSPKKEDLQSPK 289
SPK E +++ K A+ E + K E + K
Sbjct: 513 VASPKSEKKKKKKSKDTEAAVDAEDESAAEKSEKKKKKK 551
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 32.7 bits (71), Expect = 0.042
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEE---RRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRR 174
E ++ + + ++ IAEE R ++ +KE R+RK+ E + +KE+ RR+
Sbjct: 143 EKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEELQRQKEEAMRRK 202
Query: 175 KKTAIAEERRLQSPKKEDCNRRRKK 249
K A EE RL+ K N+ R K
Sbjct: 203 K--AEEEEERLKQMKLLGKNKSRPK 225
Score = 30.7 bits (66), Expect = 0.17
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 24 QSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKK 203
++ +KE R+RK+ E +KE RR K A EE RL+ K +N+ R K
Sbjct: 168 EAQRKEAMERQRKEEERYRELEELQRQKEEAMRR--KKAEEEEERLKQMKLLGKNKSRPK 225
Query: 204 TAIA 215
+ A
Sbjct: 226 LSFA 229
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +3
Query: 51 RRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRL 230
RR + ++ +RR +PK+ + R T +R + + +NR +K EE R
Sbjct: 12 RRHRSRSVTPKRRSPTPKRYKRQKSRSSTPSPAKRSPAATLESAKNRNGEKLKREEEERK 71
Query: 231 QSPKKED 251
+ ++ +
Sbjct: 72 RRQREAE 78
Score = 29.1 bits (62), Expect = 0.52
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRK--KIAIAEE---RKLQSPKNENCNRRRKKTAIAEERRPQSPK 196
E +++ +KE+ ++ K + IAEE R ++ + E R+RK+ E +
Sbjct: 135 EASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEELQRQ 194
Query: 197 KEDCNRRRKKTAIAEERRLQSPK 265
KE+ RR+K A EE RL+ K
Sbjct: 195 KEEAMRRKK--AEEEEERLKQMK 215
Score = 27.1 bits (57), Expect = 2.1
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
+KE R+RK+ E +KE+ RR+K A EE +L+ K N+ R K +
Sbjct: 171 RKEAMERQRKEEERYRELEELQRQKEEAMRRKK--AEEEEERLKQMKLLGKNKSRPKLSF 228
Query: 190 A 192
A
Sbjct: 229 A 229
Score = 26.2 bits (55), Expect = 3.7
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRK--KTAIAEE--RRLQSPKKENCNRRRMKTAIAEERRLQSPKK 176
E +++ +KE+ ++ K + IAEE +R++ +++ R+ K + ++
Sbjct: 135 EASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEELQRQ 194
Query: 177 EDRNRRRKKTAIAEERRLQ 233
++ RRKK EER Q
Sbjct: 195 KEEAMRRKKAEEEEERLKQ 213
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIA 169
R+RK+ E +KE+ RR+K A EE +L+ K N+ R K + A
Sbjct: 177 RQRKEEERYRELEELQRQKEEAMRRKK--AEEEEERLKQMKLLGKNKSRPKLSFA 229
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 32.3 bits (70), Expect = 0.056
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAE----ERRLQSPKKEDRNRR 194
S ED RRR+K + ++ Q +KE RRR ++ +E E S EDR+RR
Sbjct: 208 SSDSEDERRRRRKAK--KSKKKQKQRKER--RRRYSSSSSESSESESASDSDSDEDRSRR 263
Query: 195 RKKTAIAEERR 227
+KK+ +R
Sbjct: 264 KKKSKRHSNKR 274
Score = 26.6 bits (56), Expect = 2.8
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 16 EDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAE----E*KLQSPKKEDCNRRRKKT 183
ED RRR+K + ++ Q +KE RRR ++ +E E S ED +RR+KK+
Sbjct: 212 EDERRRRRKAK--KSKKKQKQRKE--RRRRYSSSSSESSESESASDSDSDEDRSRRKKKS 267
Query: 184 AIAEERR 204
+R
Sbjct: 268 KRHSNKR 274
Score = 25.8 bits (54), Expect = 4.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 73 SPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKK 249
S ED RRR+K ++ K Q +KE R ++ + E S D +R R+K
Sbjct: 208 SSDSEDERRRRRKAKKSK--KKQKQRKERRRRYSSSSSESSESESASDSDSDEDRSRRK 264
>At3g48120.1 68416.m05248 expressed protein
Length = 328
Score = 32.3 bits (70), Expect = 0.056
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 KEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNR--RRKKTA 209
+E RRR ++ +ER ++ + RR E RR +S E RNR R+
Sbjct: 92 RESSERRRYRSRERDERDKSHRRRSRSSERRSSYVDRERRRSRSRSAERRNRYGDRESRR 151
Query: 210 IAEERRLQSPKKE 248
+ R SP++E
Sbjct: 152 RSNRSRSLSPRRE 164
Score = 28.3 bits (60), Expect = 0.91
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +2
Query: 59 KEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNR--RRKKTA 232
+E RRR + +ER + + RR E RR +S E NR R+
Sbjct: 92 RESSERRRYRSRERDERDKSHRRRSRSSERRSSYVDRERRRSRSRSAERRNRYGDRESRR 151
Query: 233 IAEERRLQSPKKE 271
+ R SP++E
Sbjct: 152 RSNRSRSLSPRRE 164
Score = 27.9 bits (59), Expect = 1.2
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNR--RRKKTAIAEER 178
RRR ++ +ER ++ + RR E R+ +S E NR R+ +
Sbjct: 97 RRRYRSRERDERDKSHRRRSRSSERRSSYVDRERRRSRSRSAERRNRYGDRESRRRSNRS 156
Query: 179 RPQSPKKEDCNRRRKKTAIAEERRL 253
R SP++E +R K + RL
Sbjct: 157 RSLSPRRERRSREDVKEKKPDYSRL 181
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 32.3 bits (70), Expect = 0.056
Identities = 16/84 (19%), Positives = 39/84 (46%)
Frame = +1
Query: 1 HEAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKK 180
HE +E+ ++KK ++ K + ++ +K +++E + + N++++K
Sbjct: 123 HEELEEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEK 182
Query: 181 TAIAEERRLQSPKKEDCNRRRKKT 252
E + + PKKE + K+
Sbjct: 183 DESGTEEKKKKPKKEKKQKEESKS 206
Score = 32.3 bits (70), Expect = 0.056
Identities = 15/74 (20%), Positives = 36/74 (48%)
Frame = +2
Query: 59 KEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIA 238
+E+ ++KK ++ KN+ ++ +K +++E+ + N++++K
Sbjct: 127 EEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESG 186
Query: 239 EERRLQSPKKEDLQ 280
E + + PKKE Q
Sbjct: 187 TEEKKKKPKKEKKQ 200
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 26 IAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKED 205
+ E+++ ++P + + R K+ E K + E +++ K E + KK+D
Sbjct: 377 VKEDKKKENPLETEVMSRDIKLEEPEAEKKEEDDTEE--KKKSKVEGGESEEGKKKKKKD 434
Query: 206 CNRRRKK-TAIAEERRLQSPKKEDLQSPK 289
+ +KK T + + KK+D + K
Sbjct: 435 KKKNKKKDTKEPKMTEDEEEKKDDSKDVK 463
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
E K+ED +KK+ + + KK+ ++++ K +E K+ ++E + K
Sbjct: 404 EKKEEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEE--KKDDSKD 461
Query: 184 AIAEERRLQSPKKEDCNRRRK 246
E + + KK+ +++K
Sbjct: 462 VKIEGSKAKEEKKDKDVKKKK 482
Score = 26.6 bits (56), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEER-RPQSPKKEDCN 211
E+ + KKE ++ ++ + K+E+C +KK E++ + +S +KED
Sbjct: 225 EKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKK 284
Query: 212 RRRKKTAIAEERRLQSPKKED 274
+ KK + + P+KED
Sbjct: 285 LKGKK------GKGEKPEKED 299
Score = 25.4 bits (53), Expect = 6.4
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
T +KK E+++ + K + + + K E+ L+ E + +E+
Sbjct: 187 TEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKD 246
Query: 182 PQSPKK----EDCNRRRKKTAIAEERRL-QSPKKED 274
+ KK E C +KK E++ +S +KED
Sbjct: 247 SKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKED 282
Score = 25.4 bits (53), Expect = 6.4
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKT-----AIAEE*KLQSP----KKEDC 162
K +D ++K +E++ + +K+ ++K+ ++ + KL+ P K+ED
Sbjct: 351 KDDDEGETKQKKNKKKEKKSEKGEKDVKEDKKKENPLETEVMSRDIKLEEPEAEKKEEDD 410
Query: 163 NRRRKKTAI--AEERRLQSPKKEDCNRRRKK 249
+KK+ + E + KK+D + +KK
Sbjct: 411 TEEKKKSKVEGGESEEGKKKKKKDKKKNKKK 441
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/82 (18%), Positives = 36/82 (43%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
+ K+ D + A+ + + K +D ++K+T I E + ++ K+D K+
Sbjct: 303 KTKEHDATEQEMDDEAADHKEGKKKKNKD-KAKKKETVIDEVCEKETKDKDDDEGETKQK 361
Query: 184 AIAEERRLQSPKKEDCNRRRKK 249
++ + ++D +KK
Sbjct: 362 KNKKKEKKSEKGEKDVKEDKKK 383
>At5g36650.1 68418.m04383 hypothetical protein
Length = 158
Score = 31.9 bits (69), Expect = 0.074
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*K---LQSPKKEDCNRRRKKT 183
+ + R KKT ++R ++ C RRR TA EE L+ ++DC RRR T
Sbjct: 7 RSEAVRSEKKTLPWRQKR---SSRDCCWRRRVATAAGEEESRRLLEKKSRDDCRRRR--T 61
Query: 184 AIAEERRLQSPKKEDCNRR 240
A ++++L + RR
Sbjct: 62 ATEKKKKLDRTVEVGMERR 80
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 151 KEDCNRRRKKTAIAEE---RRLQSPKKEDCNRRRKKT 252
++ C RRR TA EE R L+ ++DC RRR T
Sbjct: 27 RDCCWRRRVATAAGEEESRRLLEKKSRDDCRRRRTAT 63
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 9 EERRLQSPK-KEDCNRRRKKTAIAEERRLQSPKKENCNRR 125
E RRL K ++DC RRR TA ++++L + RR
Sbjct: 43 ESRRLLEKKSRDDCRRRR--TATEKKKKLDRTVEVGMERR 80
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 31.9 bits (69), Expect = 0.074
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +2
Query: 5 RRRKKTAIAEERR-LQSPKKEDCNRRRKKIAIAEE-RKLQSPKNENCNRRRKKTAIAEER 178
R +K + E RR L P++ D +R + + + K S R+ ++
Sbjct: 185 RADEKNGVKERRRDLIPPRRGDASRSPLRGSRSRSISKTNSGSKSYSGERKSRSTSQSSD 244
Query: 179 RPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSP 286
SP+K + R+++ RR SP++ + SP
Sbjct: 245 ASISPRKRRLSNSRRRSRSRSVRRSLSPRRRRIHSP 280
Score = 31.9 bits (69), Expect = 0.074
Identities = 31/94 (32%), Positives = 39/94 (41%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R R ++ I RR P E RR+ A + R+ SP RRR + A RR
Sbjct: 282 RSRSRSPIRRHRR---PTHEG---RRQSPAPSRRRRSPSPP---ARRRRSPSPPARRRRS 332
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSP 286
SP R R T A +RR SP +SP
Sbjct: 333 PSPP---ARRHRSPTPPARQRRSPSPPARRHRSP 363
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNR----- 191
SP+K + R+++ RR SP++ + + + RR + P E R +
Sbjct: 248 SPRKRRLSNSRRRSRSRSVRRSLSPRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPS 307
Query: 192 RRKKTAIAEERRLQSP 239
RR+++ RR +SP
Sbjct: 308 RRRRSPSPPARRRRSP 323
Score = 27.9 bits (59), Expect = 1.2
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 62 EDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRR-KKTAIA 238
+D NRR+ K + EE + + + +K A + + +KE+ RRR ++
Sbjct: 759 KDKNRRKNKRSSREEVSSDDNGSSDSDVDDRKEAKRRRKEEKKTRKEEKKRRREERHRKR 818
Query: 239 EERR--LQSPKKEDL 277
EERR + KK++L
Sbjct: 819 EERRGGKEKHKKQEL 833
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
RG+ R SP + +R KT + K + ++ + +RRL + ++
Sbjct: 204 RGDASR--SPLRGSRSRSISKTNSGSKSYSGERKSRSTSQSSDASISPRKRRLSNSRRRS 261
Query: 183 RNRRRKKTAIAEERRLQSP 239
R+R +++ RR+ SP
Sbjct: 262 RSRSVRRSLSPRRRRIHSP 280
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 16 EDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAE 195
+D NRR+ K + EE D + +K A + + +KE+ RRR++
Sbjct: 759 KDKNRRKNKRSSREEVSSDDNGSSDSDVDDRKEAKRRRKEEKKTRKEEKKRRREERHRKR 818
Query: 196 ERRLQSPKK 222
E R +K
Sbjct: 819 EERRGGKEK 827
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 31.1 bits (67), Expect = 0.13
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR--P 184
+K+ EE + ++ + R+RKK E K QS E + ++ E +R P
Sbjct: 740 KKEGGEGEETQKEANESTKKERKRKK----SESKKQSDGEEETQKEPSESTKKERKRKNP 795
Query: 185 QSPKK-----EDCNRRRKKTAIAEERRLQSPKKEDLQSP 286
+S KK E+ R+ + +ER+ + PK ++ + P
Sbjct: 796 ESKKKAEAVEEEETRKESVESTKKERKRKKPKHDEEEVP 834
Score = 25.4 bits (53), Expect = 6.4
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R+RKK+ +E +++ N KK + +K +S K + +K E
Sbjct: 732 RKRKKSESKKEGGEGEETQKEANESTKKER--KRKKSESKKQSDGEEETQKEP--SESTK 787
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+ K+++ ++K A+ EE +KE ++S K
Sbjct: 788 KERKRKNPESKKKAEAVEEEET----RKESVESTK 818
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/75 (21%), Positives = 35/75 (46%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
T++ +K E ++ +E+ R+ + +ERK + PK++ ++ E +
Sbjct: 786 TKKERKRKNPESKKKAEAVEEEETRKESVESTKKERKRKKPKHD------EEEVPNETEK 839
Query: 182 PQSPKKEDCNRRRKK 226
P+ KK+ + KK
Sbjct: 840 PEKKKKKKREGKSKK 854
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 31.1 bits (67), Expect = 0.13
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRR--KKIAIAEERKLQSPKNEN--CNRRRKKTAIAEE 175
R+KK +++E S + RRR KK + + R L ++E ++RRK+ +
Sbjct: 179 RKKKKRVSDESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKERRGRKR 238
Query: 176 RRPQSPKKEDCNRRRKKTAIAEERRLQSPKK 268
S + ED + RR K +E+R + ++
Sbjct: 239 DEDDSDESEDEDDRRVKRKSRKEKRRRRSRR 269
Score = 29.5 bits (63), Expect = 0.39
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRR-MKTAIAEERRLQS---PKKEDRNRR 194
S K+ + R+KK +++E S + RRR MK + +RR S ++E R++R
Sbjct: 170 SSVKKTSSVRKKKKRVSDESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKR 229
Query: 195 RKKTAIAEERRLQSPKKED 251
RK+ + S + ED
Sbjct: 230 RKERRGRKRDEDDSDESED 248
Score = 28.7 bits (61), Expect = 0.69
Identities = 16/73 (21%), Positives = 38/73 (52%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R +ERR + ++D + + ++RR++ ++ RRR + +++ +S + +
Sbjct: 229 RRKERRGRKRDEDDSDESEDE----DDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDR 284
Query: 183 RNRRRKKTAIAEE 221
R +RR K A + +
Sbjct: 285 RQKRRNKVAASSD 297
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 29 AEERRLQSPKKEDCNRRRKKIAIAE 103
+EE RLQ+P CN R+K++A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 29.9 bits (64), Expect = 0.30
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 52 AEERRLQSPKKEDCNRRRKKTAIAE 126
+EE RLQ+P CN R+K+ A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 29.5 bits (63), Expect = 0.39
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAE 80
EE RLQ+P CN R+K+ A+A+
Sbjct: 63 EETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 28.7 bits (61), Expect = 0.69
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 98 AEERKLQSPKNENCNRRRKKTAIAE 172
+EE +LQ+P CN R+K+ A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 75 AEERRLQSPKKENCNRRRMKTAIAE 149
+EE RLQ+P CN R+ + A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 121 AEE*KLQSPKKEDCNRRRKKTAIAE 195
+EE +LQ+P CN R+K+ A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 167 AEERRPQSPKKEDCNRRRKKTAIAE 241
+EE R Q+P CN R+K+ A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 144 AEERRLQSPKKEDRNRRRKKTAIAE 218
+EE RLQ+P N R+K+ A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
>At1g79200.1 68414.m09234 expressed protein
Length = 159
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +3
Query: 39 EDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAE 218
E ++ +K++ E S +E R R E R +S KK+ ++ + K++ ++
Sbjct: 4 ERSSKEKKRSRARSEDSSSSDYEEKVKRHRGTEKDDERRSRRSDKKDKKSHKHHKSSTSK 63
Query: 219 ERRLQSPKKE 248
+ + PKK+
Sbjct: 64 KSKDDKPKKK 73
Score = 29.9 bits (64), Expect = 0.30
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +2
Query: 62 EDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAE 241
E ++ +K+ E S E R R E R +S KK+ + + K++ ++
Sbjct: 4 ERSSKEKKRSRARSEDSSSSDYEEKVKRHRGTEKDDERRSRRSDKKDKKSHKHHKSSTSK 63
Query: 242 ERRLQSPKKEDLQS 283
+ + PKK+ +S
Sbjct: 64 KSKDDKPKKKHTES 77
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/70 (21%), Positives = 32/70 (45%)
Frame = +1
Query: 16 EDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAE 195
E ++ +K++ E S +E R R E +S KK+ + + K++ ++
Sbjct: 4 ERSSKEKKRSRARSEDSSSSDYEEKVKRHRGTEKDDERRSRRSDKKDKKSHKHHKSSTSK 63
Query: 196 ERRLQSPKKE 225
+ + PKK+
Sbjct: 64 KSKDDKPKKK 73
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 31.1 bits (67), Expect = 0.13
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKT-----AIAEERRLQSPKKENCNRRRMKTAIAEERRLQS 167
+ EER + ++ + RR+++ I EE RLQ ++ RR K E R +
Sbjct: 392 KNEERMRKEMERNERERRKEEERLMRERIKEEERLQREQRREVERRE-KFLQRENERAEK 450
Query: 168 PKKEDRNRRRK 200
K++D RR K
Sbjct: 451 KKQKDEIRREK 461
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/83 (19%), Positives = 40/83 (48%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R RK+ E R + ++ R +++ + E++ + + E +R + A ++++
Sbjct: 396 RMRKEMERNERERRKEEERLMRERIKEEERLQREQRREVERREKFLQRENERAEKKKQKD 455
Query: 185 QSPKKEDCNRRRKKTAIAEERRL 253
+ +++D RR+ A RR+
Sbjct: 456 EIRREKDAIRRKLAIEKATARRI 478
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 30.7 bits (66), Expect = 0.17
Identities = 17/89 (19%), Positives = 37/89 (41%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
RR ++ +++ + +EDCN + +RK + KKT +
Sbjct: 94 RREREKEKGRKKQKKERSREDCNEESDDVKCGLKRKRTERSRHGDDDVEKKTRDEQVEDE 153
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKE 271
Q E+ +RR++ +E + Q+ + +
Sbjct: 154 QKQLAEEVEKRRRRVQEWQELKRQNEEAQ 182
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/79 (20%), Positives = 31/79 (39%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIA 192
K D RR ++ +++ + +EDCN + K + + KKT
Sbjct: 89 KRDRERREREKEKGRKKQKKERSREDCNEESDDVKCGLKRKRTERSRHGDDDVEKKTRDE 148
Query: 193 EERRLQSPKKEDCNRRRKK 249
+ Q E+ +RR++
Sbjct: 149 QVEDEQKQLAEEVEKRRRR 167
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/67 (19%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRK--KTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKK 176
+G +++ + +EDCN K + +R +S ++ ++ + E+ + Q ++
Sbjct: 101 KGRKKQKKERSREDCNEESDDVKCGLKRKRTERSRHGDDDVEKKTRDEQVEDEQKQLAEE 160
Query: 177 EDRNRRR 197
++ RRR
Sbjct: 161 VEKRRRR 167
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 30.3 bits (65), Expect = 0.22
Identities = 14/74 (18%), Positives = 36/74 (48%)
Frame = +3
Query: 30 PKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTA 209
PK ++ ++ K+ A +++ + KE ++ + E++ +K+D+ R+ K+
Sbjct: 58 PKDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERK 117
Query: 210 IAEERRLQSPKKED 251
E + + KE+
Sbjct: 118 EKERKAKEKKDKEE 131
Score = 29.1 bits (62), Expect = 0.52
Identities = 14/77 (18%), Positives = 38/77 (49%)
Frame = +2
Query: 53 PKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTA 232
PK ++ ++ K+ A ++++ + E ++ K+ E++ +K+D R+ K+
Sbjct: 58 PKDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERK 117
Query: 233 IAEERRLQSPKKEDLQS 283
E + + KE+ ++
Sbjct: 118 EKERKAKEKKDKEESEA 134
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/77 (16%), Positives = 35/77 (45%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
++ + KKE + +++ ++ R + KK+ + + E+ R + +K
Sbjct: 67 DKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAKEK 126
Query: 189 RRRKKTAIAEERRLQSP 239
+ ++++ A R+ SP
Sbjct: 127 KDKEESEAAARYRILSP 143
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/73 (19%), Positives = 35/73 (47%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
K ++ ++ K+ A +++ + KE+ ++ K+ E+ +K+D R+ K+
Sbjct: 59 KDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKE 118
Query: 190 AEERRLQSPKKED 228
E + + KE+
Sbjct: 119 KERKAKEKKDKEE 131
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/75 (24%), Positives = 39/75 (52%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
E +K+D + K E++ + +K+D R+ K+ ++ KL+ KK+ R++K
Sbjct: 62 EQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKE----KKDKLEKEKKD--KERKEKE 115
Query: 184 AIAEERRLQSPKKED 228
+ER+ + K ++
Sbjct: 116 RKEKERKAKEKKDKE 130
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/66 (18%), Positives = 34/66 (51%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQ 187
++ K A++++ + K ++ ++ K +E+K + K + R++K +ER+ +
Sbjct: 65 KKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAK 124
Query: 188 SPKKED 205
K ++
Sbjct: 125 EKKDKE 130
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/77 (19%), Positives = 37/77 (48%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCN 211
+E+ + K+++ + +K +ERK + K + + +K E+ R + +K
Sbjct: 68 KEKAAKDKKEKEKKDKEEKEKKDKERKEKE-KKDKLEKEKKDKERKEKERKEKERKAKEK 126
Query: 212 RRRKKTAIAEERRLQSP 262
+ ++++ A R+ SP
Sbjct: 127 KDKEESEAAARYRILSP 143
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 30.3 bits (65), Expect = 0.22
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 24 QSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKK 203
+ + ED RRRK+ + + + +KE RRR K +++R +S K D+ R+ KK
Sbjct: 122 EESESEDERRRRKR----KRKEREEEEKERKRRRREKD---KKKRNKSDKDGDKKRKEKK 174
Query: 204 TAIAEE 221
+E+
Sbjct: 175 KKKSEK 180
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/81 (22%), Positives = 37/81 (45%)
Frame = +3
Query: 6 GEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDR 185
G E L+S + + RR+ +R+ S +K + +RRR + + +S + +
Sbjct: 61 GSESGLESGSESEKEERRRSRKDRGKRK--SDRKSSRSRRRRRDYSSSSSDSESESESEY 118
Query: 186 NRRRKKTAIAEERRLQSPKKE 248
+ + + E RR + +KE
Sbjct: 119 SDSEESESEDERRRRKRKRKE 139
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 30.3 bits (65), Expect = 0.22
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
E+R + +K+D RR+++ I +E Q ++ R ++ EE R + +
Sbjct: 343 EKRIRRELEKQDMLRRKREEQIRKEMERQDRERRKEEERLLREKQREEERYLKEQMRELQ 402
Query: 189 RR----RKKTAIAEERRLQSPKKED 251
RR +K+T AE+ R + +++
Sbjct: 403 RREKFLKKETIRAEKMRQKEEMRKE 427
Score = 29.1 bits (62), Expect = 0.52
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 29 AEERRLQSP-KKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKED 205
A E+R++ +K+D RR+++ I +E + Q + R + EE R + +
Sbjct: 341 AHEKRIRRELEKQDMLRRKREEQIRKEMERQDRERRKEEERLLREKQREEERYLKEQMRE 400
Query: 206 CNRRRKKTAIAEERRLQSPKKEDLQSPK 289
RR K R + +KE+++ K
Sbjct: 401 LQRREKFLKKETIRAEKMRQKEEMRKEK 428
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
+K + R ++ E+R + +K+D RR+++ I +E + Q ++ R +
Sbjct: 328 RKNEEARIAREVEAHEKRIRRELEKQDMLRRKREEQIRKEMERQDRERRKEEERLLREKQ 387
Query: 190 AEERRLQSPKKEDCNRRRK 246
EE R + + RR K
Sbjct: 388 REEERYLKEQMRELQRREK 406
Score = 26.2 bits (55), Expect = 3.7
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRR---- 171
E +K+D RR+++ I +E Q ++ R + EE + + + RR
Sbjct: 349 ELEKQDMLRRKREEQIRKEMERQDRERRKEEERLLREKQREEERYLKEQMRELQRREKFL 408
Query: 172 RKKTAIAEERRLQSPKKEDCNRRRKK 249
+K+T AE+ R + +++ R K
Sbjct: 409 KKETIRAEKMRQKEEMRKEKEVARLK 434
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R EE RL K+ + R K+ +RR + KKE +M+ + + + +
Sbjct: 376 RKEEERLLREKQREEERYLKEQMRELQRREKFLKKETIRAEKMRQKEEMRKEKEVARLKA 435
Query: 183 RNRRRKKTAIAEE 221
N R IA+E
Sbjct: 436 ANERAIARKIAKE 448
Score = 25.4 bits (53), Expect = 6.4
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +2
Query: 41 RLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEE--RRPQSPKKEDCNR 214
+L+ +K + R +++ E+R + + ++ RR+++ I +E R+ + +KE+
Sbjct: 323 QLERHRKNEEARIAREVEAHEKRIRRELEKQDMLRRKREEQIRKEMERQDRERRKEEERL 382
Query: 215 RRKKTAIAEERRLQSPKKE 271
R+K EER L+ +E
Sbjct: 383 LREKQR-EEERYLKEQMRE 400
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 30.3 bits (65), Expect = 0.22
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKK-----TAIAEERRLQSPKKENCNRRRMKTAIAEERRLQS 167
R EE + + +K+D + KK AIA E + +KE +R ++A +++ +
Sbjct: 317 RKEEEKAEKQQKKDAKIQAKKKQEEDAAIAAEE--EKRRKEEEEKRAAESAQQQKKTKER 374
Query: 168 PKK---EDRNRRRKKTAIAEERRLQSPKKED 251
KK ++RNR R +A +RL +ED
Sbjct: 375 EKKLLRKERNRLRTLSAPLVAQRLLDISEED 405
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +3
Query: 54 RRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 233
+RK+ AE+++ + K + ++ AIA E + +KE+ +R ++A +++ +
Sbjct: 316 KRKEEEKAEKQQKKDAKIQAKKKQEEDAAIAAEE--EKRRKEEEEKRAAESAQQQKKTKE 373
Query: 234 SPKK 245
KK
Sbjct: 374 REKK 377
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 30.3 bits (65), Expect = 0.22
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCN 211
EER+ + KKE R+ +K AEE ++ K ++ + K EE +P+ KK
Sbjct: 6 EERKKE--KKEKKERKERKRREAEELAVREKKISKKHKSKSK----EEEKPEKSKK---- 55
Query: 212 RRRKKTAIAEERRLQSPKKEDLQS 283
+ +K + EE + SP +S
Sbjct: 56 KSKKYEEVEEEEKSPSPSPSPKKS 79
Score = 28.7 bits (61), Expect = 0.69
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +3
Query: 6 GEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDR 185
GEER+ + KKE R+ +K AEE ++ K ++ + K EE + + KK
Sbjct: 5 GEERKKE--KKEKKERKERKRREAEELAVREKKISKKHKSKSK----EEEKPEKSKK--- 55
Query: 186 NRRRKKTAIAEERRLQSP 239
+ +K + EE + SP
Sbjct: 56 -KSKKYEEVEEEEKSPSP 72
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERK-LQSPKNENCNRRRKK--TAIAEE 175
R+++K E + + + E+ R KKI+ + K + K E ++ KK EE
Sbjct: 8 RKKEKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEEE 67
Query: 176 RRPQ---SPKKEDCNRRRKKTAIAEERRLQSPK 265
+ P SPKK ++++ K + E + K
Sbjct: 68 KSPSPSPSPKKSKESKKKHKRSSDESEEIVDSK 100
Score = 26.2 bits (55), Expect = 3.7
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +2
Query: 59 KEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIA 238
KE R+++K E ++ + + E R KK I+++ + +S ++E + +KK+
Sbjct: 3 KEGEERKKEKKEKKERKERKRREAEELAVREKK--ISKKHKSKSKEEEKPEKSKKKSKKY 60
Query: 239 EERRLQSPKKEDLQSPK 289
EE + SPK
Sbjct: 61 EEVEEEEKSPSPSPSPK 77
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 78 EERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKK 245
EER+ + KKE R+ K AEE ++ K +++ + K E+ + KK
Sbjct: 6 EERKKE--KKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKK 59
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 30.3 bits (65), Expect = 0.22
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2
Query: 71 NRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERR 250
N RR+ A + P N RRR TA+A + +P SP+ NRRR+ + RR
Sbjct: 36 NHRRRLTTAAGQ---PPPPPANHLRRRTTTAVAGQPQPPSPE----NRRRRNHHHNDHRR 88
Query: 251 LQSPKKED 274
P E+
Sbjct: 89 QPPPLPEN 96
>At5g10800.1 68418.m01255 RNA recognition motif (RRM)-containing
protein KIAA0332 gene, Homo sapiens, EMBL:HSAB2330
Length = 947
Score = 29.9 bits (64), Expect = 0.30
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +3
Query: 12 ERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNR 191
E+R + D +R+R ++ + R QSP +++ R R++ + L + DR+R
Sbjct: 856 EKREKREDSRDSSRKRNRS--ESQNRSQSPPQKSLTRERVR-----DHDLDKDRHRDRDR 908
Query: 192 RRKKTAIAEERRLQSPKKE 248
++ +RR +S +E
Sbjct: 909 QQHDLDKDRKRRAKSSSRE 927
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 26 IAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEE--RRPQSPKK 199
+ E+R + D +R+R + + + QSP ++ R R + ++ R + ++
Sbjct: 853 VLPEKREKREDSRDSSRKRNRSE--SQNRSQSPPQKSLTRERVRDHDLDKDRHRDRDRQQ 910
Query: 200 EDCNRRRKKTAIAEER 247
D ++ RK+ A + R
Sbjct: 911 HDLDKDRKRRAKSSSR 926
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 29.9 bits (64), Expect = 0.30
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 6 GEERRLQSPKKEDCNRRRKKT--AIAEERRLQSPKKENCNRRRMKTAI--AEERRLQSPK 173
G R + K RRRK++ + +E +S +E RRR K++ + R +S +
Sbjct: 110 GLRSRKRKSKSSRSKRRRKRSYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSRSSRSFR 169
Query: 174 KEDRNRRRKKTAIAEERRLQSPKKE 248
K+ +RR+ K + ++E + K E
Sbjct: 170 KKRSHRRKTKYSDSDESSDEDSKAE 194
Score = 29.5 bits (63), Expect = 0.39
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKED----CNRRRKKI--AIAEERKLQSPKNENCNRRRKKTAI 166
R+ K + +E L+S K++ RRRK+ + +E +S E RRR+K++
Sbjct: 98 RKGKSDSESESDGLRSRKRKSKSSRSKRRRKRSYDSDSESEGSESDSEEEDRRRRRKSSS 157
Query: 167 AEE--RRPQSPKKEDCNRRRKKTAIAEERRLQSPKKE 271
+ R +S +K+ +RR+ K + ++E + K E
Sbjct: 158 KRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAE 194
Score = 26.6 bits (56), Expect = 2.8
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 28 RRRKKTAIAEERRLQSPKKED----CNRRRKKT--AIAEE*KLQSPKKEDCNRRRKKTAI 189
R+ K + +E L+S K++ RRRK++ + +E +S +E+ RRR+K++
Sbjct: 98 RKGKSDSESESDGLRSRKRKSKSSRSKRRRKRSYDSDSESEGSESDSEEEDRRRRRKSSS 157
Query: 190 --AEERRLQSPKKEDCNRRRKK 249
+ R +S +K+ +RR+ K
Sbjct: 158 KRKKSRSSRSFRKKRSHRRKTK 179
>At4g00238.1 68417.m00030 DNA-binding storekeeper protein-related
contains Pfam PF04504: Protein of unknown function,
DUF573; similar to storekeeper protein GI:14268476
[Solanum tuberosum]
Length = 345
Score = 29.9 bits (64), Expect = 0.30
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
TRR+KK AE ++S KKE + E +SP ++ +R + + +
Sbjct: 66 TRRKKKEGAAESPAVKSGKKEGAAESPAVKSGNNEGATESPAVKSGKKRASEGTTSRDMH 125
Query: 182 PQSPKKEDCNRR 217
+ KKE N++
Sbjct: 126 VKRIKKEGDNKK 137
Score = 28.3 bits (60), Expect = 0.91
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 51 RRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRL 230
RR+KK AE ++S KKE + E +SP + +R + + + +
Sbjct: 67 RRKKKEGAAESPAVKSGKKEGAAESPAVKSGNNEGATESPAVKSGKKRASEGTTSRDMHV 126
Query: 231 QSPKKE 248
+ KKE
Sbjct: 127 KRIKKE 132
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +2
Query: 74 RRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRL 253
RR+KK AE ++S K E + E +SP + +R + + + +
Sbjct: 67 RRKKKEGAAESPAVKSGKKEGAAESPAVKSGNNEGATESPAVKSGKKRASEGTTSRDMHV 126
Query: 254 QSPKKE 271
+ KKE
Sbjct: 127 KRIKKE 132
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 29.5 bits (63), Expect = 0.39
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENC------NRRRMKTAIAEERRLQSPKKEDRN 188
+P N R TAI E R+ ++ K +NC R + K AE + L++ K +
Sbjct: 379 TPSSLTSNSHRLLTAIVESRQKKAFKVKNCVTDIDPEREKEKREKAESQNLKASTKLSQA 438
Query: 189 R---RRKKTAIAEERRLQSPKKED 251
R +RK E R+L + ED
Sbjct: 439 REKIKRKYPLPVERRQLSTGYLED 462
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 29.5 bits (63), Expect = 0.39
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENC------NRRRMKTAIAEERRLQSPKKEDRN 188
+P N R TAI E R+ ++ K +NC R + K AE + L++ K +
Sbjct: 379 TPSSLTSNSHRLLTAIVESRQKKAFKVKNCVTDIDPEREKEKREKAESQNLKASTKLSQA 438
Query: 189 R---RRKKTAIAEERRLQSPKKED 251
R +RK E R+L + ED
Sbjct: 439 REKIKRKYPLPVERRQLSTGYLED 462
>At5g57710.1 68418.m07214 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 990
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 117 NRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 248
N +++ +E RL+ +E +RR ++E RL PKKE
Sbjct: 778 NEAKLRDLASESWRLRLCMREKFGKRRASWLCSDEERLTKPKKE 821
Score = 28.7 bits (61), Expect = 0.69
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 48 NRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKE 179
N + + +E RL+ +E +RR ++E RL PKKE
Sbjct: 778 NEAKLRDLASESWRLRLCMREKFGKRRASWLCSDEERLTKPKKE 821
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 94 NRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKE 225
N + + +E +L+ +E +RR ++E RL PKKE
Sbjct: 778 NEAKLRDLASESWRLRLCMREKFGKRRASWLCSDEERLTKPKKE 821
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEN 113
E RL+ +E +RR ++E RL PKKE+
Sbjct: 788 ESWRLRLCMREKFGKRRASWLCSDEERLTKPKKEH 822
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 25 NRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKE 156
N + + +E RL+ +E +RR ++E +L PKKE
Sbjct: 778 NEAKLRDLASESWRLRLCMREKFGKRRASWLCSDEERLTKPKKE 821
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 140 NRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKE 271
N + + +E R + +E +RR ++E RL PKKE
Sbjct: 778 NEAKLRDLASESWRLRLCMREKFGKRRASWLCSDEERLTKPKKE 821
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 29.5 bits (63), Expect = 0.39
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 18 RLQSPKKEDCNRRR-KKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRR 194
R S KKE + R KKTA+ + PKK R K +++ SPK + ++
Sbjct: 592 RTSSDKKESAGKSRSKKTAVPTKS--SPPKKATQKRSAGKRKKSDDDSDTSPKASSKRKK 649
Query: 195 RKKTAIAEERR-LQSPKKE 248
+K A + L+S KE
Sbjct: 650 TEKPAKEQAAAPLKSVSKE 668
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 44 LQSPKKEDCNRRRKKIAIAE-ERKLQSPKNENCNRRRKKTAIAEERRP-QSPKKEDCNRR 217
++ KED K+A E E K K+EN ++ +K EE + +KE+ N
Sbjct: 215 VKEANKEDDVEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDD 274
Query: 218 RKKTAIAEERRLQSPKKEDLQ 280
K+ E + KKED++
Sbjct: 275 DKEDEKEESNDDKEDKKEDIK 295
Score = 27.1 bits (57), Expect = 2.1
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAI--AEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRK 177
EA KED K A E+++ +S + + K+ E + +KE+ N K
Sbjct: 217 EANKEDDVEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDK 276
Query: 178 KTAIAEERRLQSPKKEDCNRRRKK 249
+ E + KKED + K+
Sbjct: 277 EDEKEESNDDKEDKKEDIKKSNKR 300
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 29.5 bits (63), Expect = 0.39
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 6 GEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDR 185
G+ERR + K+D R R + S K+ R + + E+R S KK +
Sbjct: 844 GDERRRKRYNKKD--RHRNDSESDSSSDYHSRDKQGSRSRSKRRESSREKR-SSHKKHSK 900
Query: 186 NRRRKKTA 209
+RR KK++
Sbjct: 901 HRRTKKSS 908
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 29.5 bits (63), Expect = 0.39
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
++ K+ A+ E RR + + + K + R +S + E +RK+ E
Sbjct: 141 KKEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELEL 200
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKK 268
+KE+ RR+K + EE +++ K
Sbjct: 201 LQRQKEEAARRKK---LEEEEEIRNSSK 225
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQ-SPKNENCNRRRKK 157
+RK+ E L +KE+ RR+K + EE +++ S K N NR R K
Sbjct: 188 QRKEEERYRELELLQRQKEEAARRKK---LEEEEEIRNSSKLSNGNRSRSK 235
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 29.5 bits (63), Expect = 0.39
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 48 NRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERR 227
NR+ + +R ++ KE N +K I + + KKE+R +R+K+ + +
Sbjct: 101 NRKPDLEEMKRQREIKKAYKERVNE--LKEEIRSNKVEKRKKKEEREKRKKENVLRTGTK 158
Query: 228 LQ 233
LQ
Sbjct: 159 LQ 160
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.5 bits (63), Expect = 0.39
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = +1
Query: 7 AKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTA 186
A++++ R+KK EE +L+ ++E+ R+ + A AEE K + +KE RKK
Sbjct: 421 ARRQEAEERKKKE---EEEKLRK-EEEERRRQEELEAQAEEAKRKRKEKEKEKLLRKK-- 474
Query: 187 IAEERRLQSPKKEDCNRR 240
E + L + +K + +R
Sbjct: 475 -LEGKLLTAKQKTEAQKR 491
Score = 28.7 bits (61), Expect = 0.69
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 30 PKKEDCNRRRKKTAIAEE-RRLQSP--KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRK 200
PKK+D + + I + R +Q +++ R+ K EE +L+ ++E+R R+ +
Sbjct: 395 PKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERKKKE---EEEKLRK-EEEERRRQEE 450
Query: 201 KTAIAEERRLQSPKKE 248
A AEE + + +KE
Sbjct: 451 LEAQAEEAKRKRKEKE 466
Score = 28.3 bits (60), Expect = 0.91
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEE-RRLQSP--KKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRR 174
+ KK+D + + I + R +Q ++++ R+KK EE KL+ ++E+ R+
Sbjct: 394 QPKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERKKKE---EEEKLRK-EEEERRRQE 449
Query: 175 KKTAIAEERRLQSPKKEDCNRRRKK 249
+ A AEE + + +KE RKK
Sbjct: 450 ELEAQAEEAKRKRKEKEKEKLLRKK 474
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.5 bits (63), Expect = 0.39
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = +1
Query: 7 AKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTA 186
A++++ R+KK EE +L+ ++E+ R+ + A AEE K + +KE RKK
Sbjct: 374 ARRQEAEERKKKE---EEEKLRK-EEEERRRQEELEAQAEEAKRKRKEKEKEKLLRKK-- 427
Query: 187 IAEERRLQSPKKEDCNRR 240
E + L + +K + +R
Sbjct: 428 -LEGKLLTAKQKTEAQKR 444
Score = 28.7 bits (61), Expect = 0.69
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 30 PKKEDCNRRRKKTAIAEE-RRLQSP--KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRK 200
PKK+D + + I + R +Q +++ R+ K EE +L+ ++E+R R+ +
Sbjct: 348 PKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERKKKE---EEEKLRK-EEEERRRQEE 403
Query: 201 KTAIAEERRLQSPKKE 248
A AEE + + +KE
Sbjct: 404 LEAQAEEAKRKRKEKE 419
Score = 28.3 bits (60), Expect = 0.91
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEE-RRLQSP--KKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRR 174
+ KK+D + + I + R +Q ++++ R+KK EE KL+ ++E+ R+
Sbjct: 347 QPKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERKKKE---EEEKLRK-EEEERRRQE 402
Query: 175 KKTAIAEERRLQSPKKEDCNRRRKK 249
+ A AEE + + +KE RKK
Sbjct: 403 ELEAQAEEAKRKRKEKEKEKLLRKK 427
>At1g55340.1 68414.m06322 expressed protein
Length = 205
Score = 29.5 bits (63), Expect = 0.39
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKT-AIAEERR 181
+R + + +++ L + K DC +RK I+ A + SP + + NR K T ++ RR
Sbjct: 25 KRVRCMKVKKDQSLANGKSTDCLTKRKLISRAVSSERGSP-SRHLNRPNKITDSLVNVRR 83
Query: 182 P--QSPKKED 205
SP+KED
Sbjct: 84 SFMASPEKED 93
Score = 29.5 bits (63), Expect = 0.39
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERR--LQSPKKED 182
+++ L + K DC +RK + A SP + ++ ++ RR + SP+KED
Sbjct: 34 KDQSLANGKSTDCLTKRKLISRAVSSERGSPSRHLNRPNKITDSLVNVRRSFMASPEKED 93
Query: 183 R-NRRRKKTAIAEERR-LQSPKKE 248
R R I E + ++ P KE
Sbjct: 94 RYYTTRGSMGIDESGKIIKEPVKE 117
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 29.1 bits (62), Expect = 0.52
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKK--EDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEER 178
++ K + EE +++ ED + +KK + E +++RK++ E +
Sbjct: 127 KKETKVKVTEEEKVKETDAVIEDGVKEKKKKKSKSKSVEADDDKEKVSKKRKRSEPEETK 186
Query: 179 RPQSPKKEDCNRRRKKTAIAE--ERRLQSPKKE 271
E+ RR+K+ + E E ++P KE
Sbjct: 187 EETEDDDEESKRRKKEENVVENDEGVQETPVKE 219
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 29.1 bits (62), Expect = 0.52
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
E +K+ +RK+ +E ++++ + D + +K +E K K+E N K
Sbjct: 409 ETEKKSSESQRKENTNSE-KKIEQVESTDSSNTQK----GDEQKTDESKRESGNDTSNKE 463
Query: 184 AIAEERRLQSPKKEDCNR 237
+ + +S KKE+ NR
Sbjct: 464 TEDDSSKTESEKKEENNR 481
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRK----------KTAIAEERRLQSPKKENCNRRRMKTAIAEERR 158
E++ +S +KE+ N +K T +E++ K+E+ N K + +
Sbjct: 411 EKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKETEDDSSK 470
Query: 159 LQSPKKEDRNR 191
+S KKE+ NR
Sbjct: 471 TESEKKEENNR 481
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNR 122
+G+E++ K+E N K + + +S KKE NR
Sbjct: 442 KGDEQKTDESKRESGNDTSNKETEDDSSKTESEKKEENNR 481
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Frame = +3
Query: 33 KKEDCNRRRKKTAIAEERRLQSPKKENCNRRRM----------KTAIAEERRLQSPKKED 182
K+E ++ + E++ +S +KEN N + T +E++ K+E
Sbjct: 396 KEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRES 455
Query: 183 RNRRRKKTAIAEERRLQSPKKED 251
N K + + +S KKE+
Sbjct: 456 GNDTSNKETEDDSSKTESEKKEE 478
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/90 (17%), Positives = 42/90 (46%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
+ +++++ E + +K+ +RK+ +E++ Q ++ N ++ +E++
Sbjct: 394 KEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQK-----GDEQKT 448
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKED 274
K+E N K + + +S KKE+
Sbjct: 449 DESKRESGNDTSNKETEDDSSKTESEKKEE 478
>At4g36980.1 68417.m05240 expressed protein
Length = 560
Score = 29.1 bits (62), Expect = 0.52
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = +2
Query: 26 IAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKED 205
I ++ ++ KK + R+R + +AE +L +N +R R + RR + +
Sbjct: 449 IKKDSATETAKKREQERQRLE-KLAETSRLS--RNRQRSRSRSISRSPPPRRHRRSRSRS 505
Query: 206 CNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+R R+ + R +SP + +SPK
Sbjct: 506 GSRSRRSRRHSSRSRSRSPSRSLSRSPK 533
>At4g35940.1 68417.m05113 expressed protein
Length = 451
Score = 29.1 bits (62), Expect = 0.52
Identities = 21/93 (22%), Positives = 43/93 (46%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
RR+ + + ++++ + +KE ++ KK E +++ S K + +RR+K A+
Sbjct: 39 RRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSH--KRRRKEDGAKVDLF 96
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQS 283
K+ + N K + E LQS + S
Sbjct: 97 HKLKESEVNCLEKSSLTVERELLQSTSQNSCDS 129
Score = 29.1 bits (62), Expect = 0.52
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAI 189
+KE ++ KK E + + S K+ ++RR+K A+ K+ + N K +
Sbjct: 56 RKEKKEKKEKKRKEREGKEVGSEKRS--HKRRRKEDGAKVDLFHKLKESEVNCLEKSSLT 113
Query: 190 AEERRLQSPKKEDCN 234
E LQS + C+
Sbjct: 114 VERELLQSTSQNSCD 128
Score = 27.9 bits (59), Expect = 1.2
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKE-----NCNRRRMKTAIAEERRLQS 167
R ++RR K+D R++K E++R + KE ++RR K A+
Sbjct: 39 RRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKEDGAKVDLFHK 98
Query: 168 PKKEDRNRRRKKTAIAEERRLQS 236
K+ + N K + E LQS
Sbjct: 99 LKESEVNCLEKSSLTVERELLQS 121
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/58 (20%), Positives = 28/58 (48%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
EE+ + +++D +K +ER+ + KKE + R + E+R ++++
Sbjct: 31 EEKAKKEQRRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKE 88
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/58 (20%), Positives = 28/58 (48%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKED 205
EE+ + +++D +K +ERK + K E + R+ + E+R ++++
Sbjct: 31 EEKAKKEQRRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKE 88
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = +3
Query: 24 QSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKK 203
+ KKE RR+ + + ++++ + +KE ++ K E + + S K+ + RR++
Sbjct: 32 EKAKKEQ--RRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKED 89
Query: 204 TA 209
A
Sbjct: 90 GA 91
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKT 183
+AKKE RR+ + + ++++ + +KE ++ KK E ++ S K+ RR++
Sbjct: 33 KAKKEQ--RRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKEDG 90
Query: 184 A 186
A
Sbjct: 91 A 91
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +2
Query: 107 RKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKED 274
+K Q K+ +++ KK +ER+ + KKE + R+ + E+R ++++
Sbjct: 35 KKEQRRKDRRSDKKDKKDK--KERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKE 88
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 288 FGDCKSSFFGDCSLLSSA-IAVFFLRRLQSSFFGDCGLLSSA 166
F K G C++L + + L+ L+S F DCG+LS A
Sbjct: 881 FSKLKYLIMGKCNMLEYVFLNISKLKHLKSVDFSDCGILSKA 922
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 81 ERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 248
E+ L++P+K + R K RR PK+E + R +K+ + + + ++PK++
Sbjct: 108 EQILKTPEKPKRKKHRPKV-----RREAKPKREPKPRAPRKSVVTDGQESKTPKRK 158
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 104 ERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKE 271
E+ L++P+ + R K RR PK+E R +K+ + + + ++PK++
Sbjct: 108 EQILKTPEKPKRKKHRPKV-----RREAKPKREPKPRAPRKSVVTDGQESKTPKRK 158
>At2g30960.1 68415.m03776 expressed protein
Length = 260
Score = 29.1 bits (62), Expect = 0.52
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 48 NRRRKKTAIAEERR--LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEE 221
N + KK EERR LQ+ +++ +K A EE+R+ ++ R+++ E
Sbjct: 35 NEKEKKRKEEEERRRKLQAEEEKKIEEEDLKKA-EEEKRMNRSNRKHFGRKKESIDGGEA 93
Query: 222 RRLQSPKKE 248
R ++ K E
Sbjct: 94 RFVEKEKPE 102
Score = 25.0 bits (52), Expect = 8.4
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 71 NRRRKKIAIAEE--RKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEE 244
N + KK EE RKLQ+ + + K A EE+R ++ R+++ E
Sbjct: 35 NEKEKKRKEEEERRRKLQAEEEKKIEEEDLKKA-EEEKRMNRSNRKHFGRKKESIDGGEA 93
Query: 245 RRLQSPKKE 271
R ++ K E
Sbjct: 94 RFVEKEKPE 102
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
+ KK EERR + +E+ + + AEE K + N R+K++ E R
Sbjct: 37 KEKKRKEEEERRRKLQAEEEKKIEEEDLKKAEEEKRMNRSNRKHFGRKKESIDGGEAR 94
>At2g01100.3 68415.m00018 expressed protein
Length = 247
Score = 29.1 bits (62), Expect = 0.52
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
+K A A + K + ++K A E +S + RR+ + + + RR
Sbjct: 29 QKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSSSEV-RRKSRRSHNKHRRHAH 87
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKE 271
+D +RR++K + ++RR SP +
Sbjct: 88 SDSDDSDRRKEKKSRRQKRRSLSPSDD 114
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNEN 136
RR+ + + + RR +D +RR++K + ++R+ SP +++
Sbjct: 72 RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDS 115
>At2g01100.2 68415.m00017 expressed protein
Length = 247
Score = 29.1 bits (62), Expect = 0.52
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
+K A A + K + ++K A E +S + RR+ + + + RR
Sbjct: 29 QKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSSSEV-RRKSRRSHNKHRRHAH 87
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKE 271
+D +RR++K + ++RR SP +
Sbjct: 88 SDSDDSDRRKEKKSRRQKRRSLSPSDD 114
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNEN 136
RR+ + + + RR +D +RR++K + ++R+ SP +++
Sbjct: 72 RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDS 115
>At2g01100.1 68415.m00016 expressed protein
Length = 247
Score = 29.1 bits (62), Expect = 0.52
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
+K A A + K + ++K A E +S + RR+ + + + RR
Sbjct: 29 QKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSSSEV-RRKSRRSHNKHRRHAH 87
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKE 271
+D +RR++K + ++RR SP +
Sbjct: 88 SDSDDSDRRKEKKSRRQKRRSLSPSDD 114
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNEN 136
RR+ + + + RR +D +RR++K + ++R+ SP +++
Sbjct: 72 RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDS 115
>At5g52230.1 68418.m06483 expressed protein
Length = 746
Score = 28.7 bits (61), Expect = 0.69
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 48 NRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERR 227
N + +K ++ R Q PKKE + + +E+R +S +E +N A +R
Sbjct: 213 NAKSEKDSVNSSVRSQKPKKEAVMKEEEEQDSSEKRITRSKVEEKKNELSNSVARRTSKR 272
Query: 228 L 230
L
Sbjct: 273 L 273
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 74 RRRKKIAIAEERKLQSPKN-ENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERR 250
R + K + EE + +N + N + +K ++ R Q PKKE + ++ +E+R
Sbjct: 190 RSQTKASTTEEVVVDLKRNLSSSNAKSEKDSVNSSVRSQKPKKEAVMKEEEEQDSSEKRI 249
Query: 251 LQSPKKE 271
+S +E
Sbjct: 250 TRSKVEE 256
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEER----KLQSPKNENCNRRRKKTA 163
+ +K ++ R Q PKKE + ++ +E+R K++ KNE N ++T+
Sbjct: 215 KSEKDSVNSSVRSQKPKKEAVMKEEEEQDSSEKRITRSKVEEKKNELSNSVARRTS 270
>At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-related
contains Pfam profile: PF05558 DREPP plasma membrane
polypeptide
Length = 168
Score = 28.7 bits (61), Expect = 0.69
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKED---CNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
K+ I EE++ ++ E KK A+ EE+K +P E KK A+ EE++P
Sbjct: 64 KEIEIVEEKKEEAKPVEVPVLAAAEEKKPAVEEEKK-TAPVEE------KKPAVEEEKKP 116
Query: 185 QSPKKEDCNRRRKKTA----IAEERRLQSPKKEDLQSP 286
+K+ +K+ +AE ++P+ +++P
Sbjct: 117 AVEEKKPVEEEKKEVVAAVPVAETPSTKAPETPVVETP 154
>At5g27140.1 68418.m03239 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 445
Score = 28.7 bits (61), Expect = 0.69
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+ PK E+C+++RKK AE ++ P K+ Q K
Sbjct: 393 EEPKTEECSKKRKKE--AELETVEDPAKKSKQEVK 425
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 4 EAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKE 156
E ++E ++ KK A EE PK E+C+++RKK A E ++ P K+
Sbjct: 375 EEEEEVNDKDTKKEADDEEE----PKTEECSKKRKKEAELE--TVEDPAKK 419
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 79 KKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKE 225
++E+ N + K +E + PK E+C+++RKK AE ++ P K+
Sbjct: 376 EEEEVNDKDTKKEADDE---EEPKTEECSKKRKKE--AELETVEDPAKK 419
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 24 QSPKKEDCNRRRKKTAIAEERRLQSPKKEN 113
+ PK E+C+++RKK AE ++ P K++
Sbjct: 393 EEPKTEECSKKRKKE--AELETVEDPAKKS 420
>At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18)
Length = 593
Score = 28.7 bits (61), Expect = 0.69
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
EE + + +E +R++ + +E+R Q KKE R+R+ + + + + S K +
Sbjct: 494 EEIKFKDKYRE--KQRQQNLQVRKEKR-QEEKKEKGKRKRVDASASNDPKKASRKLTGKQ 550
Query: 189 RRRKKTAIAEE 221
R+ +TA EE
Sbjct: 551 RQTIQTAEDEE 561
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEE 175
+R++ + +E+R Q KKE R+R + + + K S K R+ +TA EE
Sbjct: 506 QRQQNLQVRKEKR-QEEKKEKGKRKRVDASASNDPKKASRKLTGKQRQTIQTAEDEE 561
>At3g18990.1 68416.m02410 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 341
Score = 28.7 bits (61), Expect = 0.69
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 95 IAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRK--KTAIAEERRLQSPKK 268
+ E +PK R+KK A EE +P+ +D R K ++A A +R + + ++
Sbjct: 168 VKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEER 227
Query: 269 E 271
E
Sbjct: 228 E 228
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 49 IAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRK--KTAIAEERRLQSPKK 222
+ E +PK R+KK A EE +P+ +D R K ++A A +R + + ++
Sbjct: 168 VKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEER 227
Query: 223 E 225
E
Sbjct: 228 E 228
>At1g29570.1 68414.m03616 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 321
Score = 28.7 bits (61), Expect = 0.69
Identities = 15/70 (21%), Positives = 35/70 (50%)
Frame = +3
Query: 18 RLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRR 197
+++ P+ D R ++ + R + +EN +R + +I +RR +E+ +R
Sbjct: 155 QMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRR---EAEENLQEQR 211
Query: 198 KKTAIAEERR 227
++ +I +RR
Sbjct: 212 QRDSIERQRR 221
>At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contains
aminoacyl-transfer RNA synthetases class-II signature 1,
PROSITE:PS00179
Length = 766
Score = 28.7 bits (61), Expect = 0.69
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 120 RRRMKTAIAEERRLQSPKKEDR--NRRRKKTAIAEERRLQSPKKED 251
++R++ A ER+L+ PKKE + RR++ + E+ + +ED
Sbjct: 47 QQRLQELQAAERKLKPPKKEYKREQHRRREEVVEEDEDSEDDDQED 92
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 28.3 bits (60), Expect = 0.91
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDC--NRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
+ +++ RR +SP++ RR + + + R+ + E R+R ++ + R
Sbjct: 112 KSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRE 171
Query: 182 PQSPKKEDCNRR-RKKTAIAEERR 250
K D RR R ++A +E+R
Sbjct: 172 RHEEKDRDHRRRTRSRSASPDEKR 195
Score = 26.2 bits (55), Expect = 3.7
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 15 RRLQSPKKEDCNRRRK--KTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
RR +SP++ RR+ + + + RR + +E R+R ++ + R K DR+
Sbjct: 122 RRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEK--DRD 179
Query: 189 RRRK---KTAIAEERR 227
RR+ ++A +E+R
Sbjct: 180 HRRRTRSRSASPDEKR 195
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 28.3 bits (60), Expect = 0.91
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDC--NRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
+ +++ RR +SP++ RR + + + R+ + E R+R ++ + R
Sbjct: 112 KSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRE 171
Query: 182 PQSPKKEDCNRR-RKKTAIAEERR 250
K D RR R ++A +E+R
Sbjct: 172 RHEEKDRDHRRRTRSRSASPDEKR 195
Score = 26.2 bits (55), Expect = 3.7
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 15 RRLQSPKKEDCNRRRK--KTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
RR +SP++ RR+ + + + RR + +E R+R ++ + R K DR+
Sbjct: 122 RRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEK--DRD 179
Query: 189 RRRK---KTAIAEERR 227
RR+ ++A +E+R
Sbjct: 180 HRRRTRSRSASPDEKR 195
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 28.3 bits (60), Expect = 0.91
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKI-----AIAEERKLQSPKNENCNRRRKKTAIAEE 175
R+KT E++RL++ K++ + K + E KL+ + E ++ + EE
Sbjct: 61 RRKTN--EQKRLENEKRKQALKDAKDLKDLTYKTKVENKLKKTQPEKDRAEEEEKDLTEE 118
Query: 176 RRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSP 286
++ ++E+ + +K E + + P +E + P
Sbjct: 119 KKKDPTEEEEKDPTEEKKKEPAEEKKKDPTEEKKKDP 155
Score = 28.3 bits (60), Expect = 0.91
Identities = 17/90 (18%), Positives = 42/90 (46%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQS 190
++K A+ + + L+ + + K E+ + + + + ++K EE+ P
Sbjct: 74 KRKQALKDAKDLKDLTYKTKVENKLKKTQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTE 133
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKEDLQ 280
KK++ +KK EE++ ++E+L+
Sbjct: 134 EKKKEPAEEKKKDP-TEEKKKDPAEEEELE 162
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 37 KKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQ 210
K A EE+ L KK+D +K E+ K + +K+ KK AEE L+
Sbjct: 105 KDRAEEEEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKKDPTEEKKKDPAEEEELE 162
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEE 175
T+ K A EE+ L KK+D +K E++K + + + KK AEE
Sbjct: 101 TQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKKDPTEEKKKDPAEE 158
Score = 25.4 bits (53), Expect = 6.4
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIA 192
K + KKT ++R + K D +KK EE K + +K+ KK
Sbjct: 91 KTKVENKLKKTQPEKDRAEEEEK--DLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKKDPT 148
Query: 193 EERRLQSPKKEDCNRRR 243
EE++ ++E+ +R
Sbjct: 149 EEKKKDPAEEEELEIKR 165
Score = 25.4 bits (53), Expect = 6.4
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQ 164
EE+ L KK+D +K E+++ + +K+ K AEE L+
Sbjct: 111 EEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKKDPTEEKKKDPAEEEELE 162
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 28.3 bits (60), Expect = 0.91
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNR 214
E + + K++D N + K E+ K + +NE + ++ E + +KE+ +
Sbjct: 282 EEKTEEMKEQD-NNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVK 340
Query: 215 RRKKTAIAEERRLQSPKKEDLQSPK 289
K + EE + + KED Q K
Sbjct: 341 EEGKERVEEEEKEKEKVKEDDQKEK 365
>At1g56110.1 68414.m06443 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 522
Score = 28.3 bits (60), Expect = 0.91
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
+ +KK A EE +ED + ++KK E+RK+++ + EN +KKT ++
Sbjct: 447 KSKKKKAKGEEEEEVVAMEEDKSEKKKK---KEKRKMETAE-ENEKSEKKKTKKSKAGGE 502
Query: 185 QSPKKEDCNRRRKKTAIAEE 244
+ +++KK + + E
Sbjct: 503 EETDDGHSTKKKKKKSKSAE 522
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/65 (21%), Positives = 34/65 (52%)
Frame = +2
Query: 95 IAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKED 274
+ +E + + P + + + +KK A EE +ED + ++KK E+R++++ ++ +
Sbjct: 431 LKQEEEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKK---KEKRKMETAEENE 487
Query: 275 LQSPK 289
K
Sbjct: 488 KSEKK 492
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/66 (21%), Positives = 35/66 (53%)
Frame = +1
Query: 49 IAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKED 228
+ +E + P + +KK A EE + +ED + ++KK E+R++++ ++ +
Sbjct: 431 LKQEEEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKK---KEKRKMETAEENE 487
Query: 229 CNRRRK 246
+ ++K
Sbjct: 488 KSEKKK 493
>At5g63950.1 68418.m08030 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|Q03468
Excision repair protein ERCC-6 (Cockayne syndrome
protein CSB) {Homo sapiens}; contains PFam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1090
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2
Query: 246 LSSAIAVFFLRRLQSSFFGDCGLLS 172
L I FFLRRL+S FGD G S
Sbjct: 603 LREHIQPFFLRRLKSEVFGDDGATS 627
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 200 LSSAIAVFFLRRLQSSFFGD 141
L I FFLRRL+S FGD
Sbjct: 603 LREHIQPFFLRRLKSEVFGD 622
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 85 LSSAIAVFFLRRLQSSFFGD 26
L I FFLRRL+S FGD
Sbjct: 603 LREHIQPFFLRRLKSEVFGD 622
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 108 LSSAIAIFFLRRLQSSFFGD 49
L I FFLRRL+S FGD
Sbjct: 603 LREHIQPFFLRRLKSEVFGD 622
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 119 IAVFFLRRLQSSFFGD 72
I FFLRRL+S FGD
Sbjct: 607 IQPFFLRRLKSEVFGD 622
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 248 FFLRRLQSSFFGD 210
FFLRRL+S FGD
Sbjct: 610 FFLRRLKSEVFGD 622
>At3g52220.1 68416.m05737 expressed protein
Length = 237
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +2
Query: 44 LQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRK 223
L S +KED + R + + ++ ++ R +KK EER+P +KE+ + RR+
Sbjct: 145 LASSQKEDADSARLPADTSGVKTVEDGPDD-VERDQKKDR-REERKPAKREKEERHDRRE 202
Query: 224 KTAIAEER 247
K E+R
Sbjct: 203 KRERHEKR 210
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQ 187
R +K EER+ +KE+ + RR+K E + +S ++ + ++ KK ++RR
Sbjct: 177 RDQKKDRREERKPAKREKEERHDRREK---RERHEKRSARDSDDRKKHKKEKKEKKRRHD 233
Query: 188 S 190
S
Sbjct: 234 S 234
>At2g39320.1 68415.m04827 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 189
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 1 HEAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKK 153
+EAKK++ + +K EE++ K+ +KK + +E K + KK
Sbjct: 129 NEAKKKEEEEKERKDMEKEEKKKDKEDKKKDKEDKKKAKVQKEKKEKKEKK 179
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = +2
Query: 26 IAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKK 199
+ ++ ++ KKE+ + RK + E++K + K ++ +KK + +E++ + KK
Sbjct: 123 LQRKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKD-KEDKKKAKVQKEKKEKKEKK 179
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +1
Query: 49 IAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKK 222
+ ++ ++ KKE+ + RK E+ K + KK+D +KK + +E++ + KK
Sbjct: 123 LQRKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKD-KEDKKKAKVQKEKKEKKEKK 179
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/58 (22%), Positives = 31/58 (53%)
Frame = +2
Query: 95 IAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKK 268
+ +++ ++ K E + RK E+++ + KK+D +KK + +E++ + KK
Sbjct: 123 LQRKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKD-KEDKKKAKVQKEKKEKKEKK 179
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/82 (18%), Positives = 41/82 (50%)
Frame = +1
Query: 1 HEAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKK 180
++ KE +R ++ A +LQ K+ + ++ ++ ++ + + KK+D ++K
Sbjct: 101 YKKNKEKGSRSSSSSSSAVWMKLQRKKENEAKKKEEEEKERKDMEKEE-KKKDKEDKKKD 159
Query: 181 TAIAEERRLQSPKKEDCNRRRK 246
++ ++Q KKE ++ +
Sbjct: 160 KEDKKKAKVQKEKKEKKEKKNR 181
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/58 (22%), Positives = 31/58 (53%)
Frame = +3
Query: 72 IAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKK 245
+ ++ ++ KKE + R E+++ + KK+D+ +KK + +E++ + KK
Sbjct: 123 LQRKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKDK-EDKKKAKVQKEKKEKKEKK 179
Score = 25.8 bits (54), Expect = 4.8
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 59 KEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP--QSPKKEDCNRRRKKTA 232
KE +R + A KLQ K N +KK +ER+ + KK+D ++K
Sbjct: 105 KEKGSRSSSSSSSAVWMKLQRKKE---NEAKKKEEEEKERKDMEKEEKKKDKEDKKKDKE 161
Query: 233 IAEERRLQSPKKE 271
++ ++Q KKE
Sbjct: 162 DKKKAKVQKEKKE 174
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 1 HEAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKK 180
H A+K + T I R S + + +RRR K AI + + + + + ++ KK
Sbjct: 796 HRARKNYTKLQASATVIQTGLRTMSARNKHRHRRRTKAAIIIQREWRRHQVHEAYKKHKK 855
Query: 181 TAIA 192
+A
Sbjct: 856 ATLA 859
>At2g20590.2 68415.m02408 reticulon family protein non-consensus AA
donor splice site at 46485 and non-consensus GG acceptor
splice site at 46563, confirmed by Ceres cDNA 1885;
contains Pfam profile PF02453: Reticulon
Length = 323
Score = 27.9 bits (59), Expect = 1.2
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTA-------I 166
R+ +T +++ + S R+R K ++ L SP+N +RRR + +
Sbjct: 59 RKSRTRLSDRLEMTSEDAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEEKEANLV 118
Query: 167 AEERRPQSPKKEDCNRRRKK 226
EE P+K N R KK
Sbjct: 119 IEEIVKLPPRKRKTNGRPKK 138
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 54 RRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRL 230
R+ +T +++ + S R+R K ++ L SP+ R+RRR + +E L
Sbjct: 59 RKSRTRLSDRLEMTSEDAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEEKEANL 117
>At2g20590.1 68415.m02407 reticulon family protein non-consensus AA
donor splice site at 46485 and non-consensus GG acceptor
splice site at 46563, confirmed by Ceres cDNA 1885;
contains Pfam profile PF02453: Reticulon
Length = 431
Score = 27.9 bits (59), Expect = 1.2
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Frame = +2
Query: 8 RRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTA-------I 166
R+ +T +++ + S R+R K ++ L SP+N +RRR + +
Sbjct: 59 RKSRTRLSDRLEMTSEDAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEEKEANLV 118
Query: 167 AEERRPQSPKKEDCNRRRKK 226
EE P+K N R KK
Sbjct: 119 IEEIVKLPPRKRKTNGRPKK 138
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 54 RRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRL 230
R+ +T +++ + S R+R K ++ L SP+ R+RRR + +E L
Sbjct: 59 RKSRTRLSDRLEMTSEDAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEEKEANL 117
>At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative similar
to p68 RNA helicase [Schizosaccharomyces pombe]
GI:173419
Length = 537
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +2
Query: 95 IAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKED 274
+ ++K +S KN++ + + +E ++E N+ +KK EE+ + KK+D
Sbjct: 21 MTNKKKKKSKKNKHTEENHEVEEVPQEVT-NGVEEELSNKEKKKKRKREEKESEKNKKKD 79
Query: 275 LQSPK 289
+ K
Sbjct: 80 VPEKK 84
>At1g13120.1 68414.m01521 expressed protein contains Prosite
PS00012: Phosphopantetheine attachment site; similar to
GLE1 (GI:3288817) {Homo sapiens}; EST gb|N37870 comes
from this gene
Length = 611
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 188
EER+++S + ++ RRK+ A EE+ Q +K + + AEE + + +K R
Sbjct: 217 EERKIRSEEAQE-EARRKERAHQEEKIRQ--EKARAEAQMLAKIRAEEEKKEVERKAARE 273
Query: 189 RRRKKTA--IAEERRLQSPK 242
K+ A A E++L K
Sbjct: 274 VAEKEVADRKAAEQKLAEQK 293
Score = 27.5 bits (58), Expect = 1.6
Identities = 21/79 (26%), Positives = 44/79 (55%)
Frame = +3
Query: 12 ERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNR 191
E R + +K D +RK A A + L + ++E+ ++K+ I EER+++S + ++ R
Sbjct: 178 ETRKEVERKLDLQYQRK-VAEALDTHLTAVQREH----KIKSQI-EERKIRSEEAQEEAR 231
Query: 192 RRKKTAIAEERRLQSPKKE 248
R+++ E+ R + + E
Sbjct: 232 RKERAHQEEKIRQEKARAE 250
Score = 25.0 bits (52), Expect = 8.4
Identities = 20/87 (22%), Positives = 36/87 (41%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP 184
R K + EER+++S + ++ RRK+ A EE+ Q K A E++
Sbjct: 208 REHKIKSQIEERKIRSEEAQE-EARRKERAHQEEKIRQEKARAEAQMLAKIRAEEEKKEV 266
Query: 185 QSPKKEDCNRRRKKTAIAEERRLQSPK 265
+ + + A E++L K
Sbjct: 267 ERKAAREVAEKEVADRKAAEQKLAEQK 293
>At5g46795.1 68418.m05765 expressed protein
Length = 192
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKT 160
E +++ K+E+ N + + ++ ++ NE C ++KKT
Sbjct: 137 EEKIEEEKEEEINVEKPLLEKKNKKTKKNDANETCKPKKKKT 178
>At2g16990.1 68415.m01959 expressed protein
Length = 456
Score = 27.5 bits (58), Expect = 1.6
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = -2
Query: 276 KSSFFGDCSLLSSAIAVFFLRRLQSSF--FGDCGLLSSAIAVFFLRRLQFSF--FGDCSF 109
K S D L +FF + + F F D G+ SA F R F F D
Sbjct: 238 KYSSLKDMISLMKTSTIFFQALVVTFFSSFSDSGM-ESAFLYFLKARFGFDKKQFADLLL 296
Query: 108 LSSAIA----IFFLRRLQSSFFGDCSLLSSAIAVFFLRL 4
L + + +F L R S+ G+C LLS+ + + F+ +
Sbjct: 297 LITIVGSISQLFVLPRFASAI-GECKLLSTGLFMEFINM 334
>At3g42690.1 68416.m04439 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At4g04130
Length = 1009
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 6 GEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSP 170
GEE + Q+P N + K AEE ++ E ++R + I +R SP
Sbjct: 637 GEENQTQNPASPIPNLPKTKEGEAEEEMVEETIIEGSPKQRPDSPIIPDRHGDSP 691
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
EE + Q+P N + K AEE ++ E ++R + I +R SP
Sbjct: 638 EENQTQNPASPIPNLPKTKEGEAEEEMVEETIIEGSPKQRPDSPIIPDRHGDSP 691
>At3g12860.1 68416.m01603 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 499
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +1
Query: 58 ERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNR 237
E++ + K D + ++KK E+ + K+E+ ++++KK + A E + ++
Sbjct: 432 EKKDEGEKTVDASEKKKKRKTEEK---EEEKEEEKSKKKKKKSKAVEGEELTATDNGHSK 488
Query: 238 RRKKT 252
++KKT
Sbjct: 489 KKKKT 493
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 96 SPKKENCNRRRMKTAIAEERRLQSPKK--EDRNRRRKKTAIAEERRLQSPK 242
+P++ +R+M E RL++ +K E+ + K+ + EERR ++P+
Sbjct: 397 TPEQLKDKKRQMFLKTTAEGRLRARQKRNEEELEKEKRNQLEEERRRENPE 447
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 141 IAEERRLQSPKKEDRNRRRKKTAI 212
IAE RL S K+E R +++KK+ +
Sbjct: 116 IAERERLLSEKEEQRKKKKKKSNV 139
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 27.1 bits (57), Expect = 2.1
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 47 QSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKK 226
+SP + RRR+ + + R ++ + RRR+++ E R +SPK+ D
Sbjct: 110 RSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSV---EERSRSPKRMD------- 159
Query: 227 TAIAEERRLQSPKKEDLQSPK 289
+++ R +SP +D SPK
Sbjct: 160 DSLSPRARDRSPVLDDEGSPK 180
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 27.1 bits (57), Expect = 2.1
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 47 QSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKK 226
+SP + RRR+ + + R ++ + RRR+++ E R +SPK+ D
Sbjct: 121 RSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSV---EERSRSPKRMD------- 170
Query: 227 TAIAEERRLQSPKKEDLQSPK 289
+++ R +SP +D SPK
Sbjct: 171 DSLSPRARDRSPVLDDEGSPK 191
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 27.1 bits (57), Expect = 2.1
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 47 QSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKK 226
+SP + RRR+ + + R ++ + RRR+++ E R +SPK+ D
Sbjct: 151 RSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSV---EERSRSPKRMD------- 200
Query: 227 TAIAEERRLQSPKKEDLQSPK 289
+++ R +SP +D SPK
Sbjct: 201 DSLSPRARDRSPVLDDEGSPK 221
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRP----QSPKKE 202
E+ +P++E + +KI E + K + + K+ + + E + +S KKE
Sbjct: 586 EKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKE 645
Query: 203 DCNRRRKKT 229
KKT
Sbjct: 646 QVEENEKKT 654
>At5g63320.1 68418.m07946 expressed protein
Length = 569
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 99 PKKENCNRRRMKTAIAEER-RLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 248
P+K R + + EE+ RLQ+ K RRK A A E+ + ++E
Sbjct: 96 PEKLRIEREEFEKRLREEKERLQAEAKAAEEARRKAKAEAAEKARREREQE 146
>At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1004
Score = 26.6 bits (56), Expect = 2.8
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
++T + E++ QSPKKE+ + + ++E+ P+ E C + E + +
Sbjct: 564 QETEQSVEKQKQSPKKEEMEQYLSR-DMSEQVTKSLPEEEQCVQEYGAYDKLEAQDVLTI 622
Query: 194 KK-EDCNRRRKKTAIAEERRLQSPKKEDLQ 280
K E+ + + + ++ S KKEDL+
Sbjct: 623 NKLEESQQTEQSVEKEDTKKNLSSKKEDLK 652
>At1g52450.1 68414.m05921 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1136
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 161 AIAEERRPQSPKKED-CNRRRKKTA 232
A+ EE++PQS KK D N+ R T+
Sbjct: 708 ALEEEKKPQSKKKNDKINKHRASTS 732
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
+R S E C R+RKK + + + N+NC + + R SP
Sbjct: 252 KRGKDSSSDEPCERQRKKRSATQPSSSNANNNDNCAGNGTEQTHQRDSRVISP 304
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/87 (21%), Positives = 36/87 (41%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
+RRR+ E+ ++ +D N+R K S +E C R+RKK + +
Sbjct: 228 SRRRRNCRNIEQDTSEANDDDDQNKRGK----------DSSSDEPCERQRKKRSATQPSS 277
Query: 182 PQSPKKEDCNRRRKKTAIAEERRLQSP 262
+ ++C + + R+ SP
Sbjct: 278 SNANNNDNCAGNGTEQTHQRDSRVISP 304
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +3
Query: 12 ERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSP 170
+R S E C R+RKK + + + +NC + + R+ SP
Sbjct: 252 KRGKDSSSDEPCERQRKKRSATQPSSSNANNNDNCAGNGTEQTHQRDSRVISP 304
>At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 357
Score = 26.2 bits (55), Expect = 3.7
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKL--QSPKNENCNRRRKKTAIAEER 178
R R+ + + RL K D +RRR+++A E + +SP+ + R + R
Sbjct: 225 RGRRSPSPYKRARLSPDYKRD-DRRRERVASPENGAVRNRSPR-KGRGESRSPPPYEKRR 282
Query: 179 RPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+SP + RR ++ E+R + + SP+
Sbjct: 283 ESRSPPPYE-KRRESRSPPPYEKRRERSRSRSKSSPE 318
>At5g52040.1 68418.m06458 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 356
Score = 26.2 bits (55), Expect = 3.7
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKL--QSPKNENCNRRRKKTAIAEER 178
R R+ + + RL K D +RRR+++A E + +SP+ + R + R
Sbjct: 225 RGRRSPSPYKRARLSPDYKRD-DRRRERVASPENGAVRNRSPR-KGRGESRSPPPYEKRR 282
Query: 179 RPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSPK 289
+SP + RR ++ E+R + + SP+
Sbjct: 283 ESRSPPPYE-KRRESRSPPPYEKRRERSRSRSKSSPE 318
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/73 (19%), Positives = 33/73 (45%)
Frame = +2
Query: 56 KKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAI 235
K+E N R+K +L+ + + + ++ R +K++ +RK+ +
Sbjct: 150 KEETDNNRQKDDRSVTYEELRERLHRKIDELKGGRGGSDRPRSNERRKKNLPNKRKRDTV 209
Query: 236 AEERRLQSPKKED 274
+EE+ ++ K D
Sbjct: 210 SEEKTVEEIKSAD 222
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +1
Query: 1 HEAKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*K------LQSPKKEDC 162
+E +K++ +RK+ ++EE+ ++ K D + + K + E K ++ E+
Sbjct: 193 NERRKKNLPNKRKRDTVSEEKTVEEIKSAD--KGKGKLDVEEAAKDLTFGYVKIDDDEEH 250
Query: 163 NRRRKKTAIAEERRLQSPKKEDCNRR 240
+ +KK +++ R L+ K + ++
Sbjct: 251 GKEKKKRRLSKARELERAMKLEAAKK 276
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/85 (18%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +3
Query: 6 GEER-RLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEE----RRLQSP 170
G +R R +K++ +RK+ ++EE+ ++ K + + ++ A + ++
Sbjct: 186 GSDRPRSNERRKKNLPNKRKRDTVSEEKTVEEIKSADKGKGKLDVEEAAKDLTFGYVKID 245
Query: 171 KKEDRNRRRKKTAIAEERRLQSPKK 245
E+ + +KK +++ R L+ K
Sbjct: 246 DDEEHGKEKKKRRLSKARELERAMK 270
>At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (DPB)
similar to Swiss-Prot:Q14186 transcription factor DP-1
[Homo sapiens]; contains Pfam profile PF02319:
Transcription factor E2F/dimerisation partner (TDP)
Length = 385
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 90 LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEE 221
+ KKE R +T++++ L++ + RNR KKTA ++E
Sbjct: 171 ISKDKKEIQWRGLPRTSLSDIEELKNERLSLRNRIEKKTAYSQE 214
>At4g10640.1 68417.m01738 calmodulin-binding family protein contains
IQ calmodulin-binding motif, Pfam:PF00612
Length = 423
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 17 KTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENC 139
++A A+ R +P++ + K++ AEE L+SP ++C
Sbjct: 351 ESAKAKARTQSTPRRRPMTAK-KRLCYAEEESLRSPSFKSC 390
>At3g58050.1 68416.m06471 expressed protein
Length = 1209
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +2
Query: 17 KTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPK 196
K I E++++ ++E+ +R + EERK + E + RKK + E+ + + K
Sbjct: 520 KEIITLEKQVKLLEEEEKEKREE-----EERKEKKRSKEREKKLRKKERLKEKDKGKEKK 574
Query: 197 KEDCN 211
+C+
Sbjct: 575 NPECS 579
>At3g51640.1 68416.m05663 expressed protein
Length = 826
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRR-RKKIA-IAEERKLQSPKNENCNRRRKKTAIAEER 178
+ R+K + RL+ E+ R+ R+++A + EER+ + + K + A+E+
Sbjct: 254 KARRKAEEKRQARLEKEHSEEEERKQREEVARLVEERRRLRDEILEAEKCSKLSVAAKEK 313
Query: 179 RPQSPKKEDCNRRRKK 226
+ +K+ RR+++
Sbjct: 314 DTKEAEKKRQERRKER 329
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/82 (21%), Positives = 40/82 (48%)
Frame = +1
Query: 7 AKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTA 186
+++E+ +R + + EERR + + + K + A+E + +K+ RR+++
Sbjct: 272 SEEEERKQREEVARLVEERRRLRDEILEAEKCSKLSVAAKEKDTKEAEKKRQERRKERDR 331
Query: 187 IAEERRLQSPKKEDCNRRRKKT 252
+ + S +E R RK+T
Sbjct: 332 ASS--KSNSDGEEVDKRTRKET 351
>At2g44430.1 68415.m05525 DNA-binding bromodomain-containing protein
contains Pfam domains, Pfam PF00439: Bromodomain and
PF00249: Myb-like DNA-binding domain
Length = 646
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 71 NRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERR 250
+RR K+A ++ K N ++K+T + K+D + KKT A++++
Sbjct: 492 SRRANKVAAVVANNTKTGKGRN---KQKQTESKTNSSNDNSSKQDTGKTEKKTVSADKKK 548
>At2g24440.1 68415.m02921 expressed protein
Length = 183
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +3
Query: 60 KKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSP 239
K AIA R L+S ++ + + + ++ +++SP+K+ R + K A ++++
Sbjct: 11 KGKAIANTRMLRSMDRKTRSDTKRDGSSSKLMKIESPEKKKRKTTKAKNVGAAKKKV--- 67
Query: 240 KKED 251
KKE+
Sbjct: 68 KKEE 71
>At2g14240.1 68415.m01587 hypothetical protein and genefinder
Length = 128
Score = 26.2 bits (55), Expect = 3.7
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNR---RRKKTAIAE 172
TRR + + + + KK+ RRR + +R E R +++ E
Sbjct: 51 TRRDGEEEVRSDGGSWNGKKKLYRRRRHYLGEETDRLAAEAGEEELRRLLENKRRGGEEE 110
Query: 173 ERRPQSPKKEDCNRRRKK 226
ERR ++ +E+ RRR+K
Sbjct: 111 ERRRRNQIEEEERRRRRK 128
Score = 25.4 bits (53), Expect = 6.4
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Frame = +1
Query: 7 AKKEDCNRRRKKTAIAEERRLQSPK-----KEDCNRRRKKTAIAEE*KLQSPKKEDCNRR 171
A++E+ R +KT E ++S K+ RRR+ E +L + E+ RR
Sbjct: 39 AREEESRRLLEKTRRDGEEEVRSDGGSWNGKKKLYRRRRHYLGEETDRLAAEAGEEELRR 98
Query: 172 ----RKKTAIAEERRLQSPKKEDCNRRRKK 249
+++ EERR ++ +E+ RRR+K
Sbjct: 99 LLENKRRGGEEEERRRRNQIEEEERRRRRK 128
>At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -3
Query: 206 SLLSSAIAVFFLRRLQSSFFGDCSFHSSAIAVFFLRRLQSSFFGDCSLLSSAIAVF 39
+++ ++ +++LQS F F SS + L R S FGD LS A+ +F
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGD---LSFAVQIF 60
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 252 SLLSSAIAVFFLRRLQSSFFGDCGLLSSAIAVFFLRRLQFSFFGDCSFLSSAIAIF 85
+++ ++ +++LQS F SS + L R S FGD SF A+ IF
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSF---AVQIF 60
>At1g33500.1 68414.m04146 hypothetical protein
Length = 254
Score = 26.2 bits (55), Expect = 3.7
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 23 AIAEERRLQSPKKEDCNRRRKKIA---IAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
A++E +RL+ + + R R +I + ++RK+ S ++++ N + I +ER S
Sbjct: 46 ALSETKRLKE-ETDQKTRTRGEICSHILEKQRKISSMESDSVNIAQSLELILQERDSLSA 104
Query: 194 KKEDCNRRRKKTAIAEERRLQSPK 265
K KTA +L+ K
Sbjct: 105 KLVSKRSNYLKTAEEARTKLEEQK 128
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +2
Query: 101 EERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKK 268
EE+K + + KK E+++ + KKE+ N++++ EE +++ K
Sbjct: 184 EEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEGEKKKEEVKVEVTTK 239
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/56 (21%), Positives = 28/56 (50%)
Frame = +3
Query: 78 EERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKK 245
EE++ + K+ K E+++ + KKE+ N++++ EE +++ K
Sbjct: 184 EEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEGEKKKEEVKVEVTTK 239
>At1g23930.1 68414.m03019 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 649
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 36 KEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRK 200
+ED +++KK ++R+ P E+ +R K + + + K+ R R++K
Sbjct: 595 EEDKKKKKKKQISKKKRKHVGPTLESGEKRGRKPSKYKGEEFTTEGKQTRKRQKK 649
>At5g61850.1 68418.m07760 floral meristem identity control protein
LEAFY (LFY) identical to PIR|B38104 LFY floral meristem
identity control protein, splice form 2 - Arabidopsis
thaliana; contains Pfam profile PF01698: Floricaula /
Leafy protein
Length = 420
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 120 RRRMKTAI-AEERRLQSPKKEDRNRRR 197
R +K A+ AE RRLQ ++E+ +RRR
Sbjct: 104 RYGIKAAVRAERRRLQEEEEEESSRRR 130
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +2
Query: 17 KTAI-AEERRLQSPKKEDCNRRR 82
K A+ AE RRLQ ++E+ +RRR
Sbjct: 108 KAAVRAERRRLQEEEEEESSRRR 130
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +1
Query: 40 KTAI-AEERRLQSPKKEDCNRRR 105
K A+ AE RRLQ ++E+ +RRR
Sbjct: 108 KAAVRAERRRLQEEEEEESSRRR 130
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +1
Query: 178 KTAI-AEERRLQSPKKEDCNRRR 243
K A+ AE RRLQ ++E+ +RRR
Sbjct: 108 KAAVRAERRRLQEEEEEESSRRR 130
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRR 59
R E RRLQ ++E+ +RRR
Sbjct: 112 RAERRRLQEEEEEESSRRR 130
>At5g51840.1 68418.m06427 expressed protein
Length = 245
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +3
Query: 30 PKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTA---IAEERRLQSPKKEDRNRRRK 200
PKK RKK ++ ER + KE R+ + A + +E + ED N +
Sbjct: 69 PKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQSLCEDLNSLVQ 128
Query: 201 KTAIAEERRLQSPKK 245
+++ + RL+ K+
Sbjct: 129 QSSNTQYARLEELKR 143
Score = 25.4 bits (53), Expect = 6.4
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +2
Query: 53 PKKEDCNRRRKKIAIAEER----KLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRR 220
PKK RKKI ++ ER KL+ + K EE QS ED N
Sbjct: 69 PKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQS-LCEDLNSLV 127
Query: 221 KKTAIAEERRLQSPKK 268
++++ + RL+ K+
Sbjct: 128 QQSSNTQYARLEELKR 143
>At5g25380.1 68418.m03010 cyclin 3a (CYC3a) nearly identical to
cyclin 3a [Arabidopsis thaliana] GI:509425; contains
Pfam profiles PF00134: Cyclin, N-terminal domain,
PF02984: Cyclin, C-terminal domain
Length = 437
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/74 (22%), Positives = 30/74 (40%)
Frame = +1
Query: 25 NRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE*KLQSPKKEDCNRRRKKTAIAEERR 204
+R K A++ + + K D N R ++ SP K K+ A +R
Sbjct: 2 HRASSKHTNAKKEAISTSKIRDNNVRVTRSRAKALGVSNSPSKPAFKHETKRVARPSNKR 61
Query: 205 LQSPKKEDCNRRRK 246
+ S CN++R+
Sbjct: 62 MASDNITVCNQKRR 75
>At5g06110.1 68418.m00679 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 25.8 bits (54), Expect = 4.8
Identities = 20/89 (22%), Positives = 41/89 (46%)
Frame = +2
Query: 2 TRRRKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR 181
T++ +K A R L + R +K+ + +KLQ + + +R+++ A A
Sbjct: 273 TQKARKEEYARIRTLVDNAYKKDIRIQKRKDDEKAKKLQKKEAKVMAKRQQEEAAAAAIE 332
Query: 182 PQSPKKEDCNRRRKKTAIAEERRLQSPKK 268
+ +KE+ +R + A +R + KK
Sbjct: 333 EEKRRKEEEAKRAAEAAQLHKRAKEREKK 361
>At3g51650.1 68416.m05664 expressed protein
Length = 826
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 5 RRRKKTAIAEERRLQSPKKEDCNRR-RKKIA-IAEERKLQSPKNENCNRRRKKTAIAEER 178
+ R+K + RL+ E+ R+ R+++A + EER+ + + K + A+E+
Sbjct: 254 KARRKAEEKRQARLEKEHSEEEERKQREEVARLVEERRRLRDEILEAEKCSKFSVAAKEK 313
Query: 179 RPQSPKKEDCNRRRKK 226
+ +K+ RR+++
Sbjct: 314 DTKEAEKKRQERRKER 329
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERR--LQSPKKENCNRRRMKTAIAEERRLQSPKK 176
RGE+ +S ++ED R R+K E R + +E + ++RR +S ++
Sbjct: 19 RGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGEGERDREVGDKRR-RSGRE 77
Query: 177 EDRNRRRKKT 206
+ RRR +T
Sbjct: 78 DTEKRRRTRT 87
>At2g13320.1 68415.m01468 expressed protein anf genefinder
Length = 129
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +3
Query: 57 RKKTAIAEERRLQSPKKEN----CNRRRMKTAIAEE--RRLQSPKKED 182
R++ +E++ L KK + C RRR+ TA+ EE RRL + D
Sbjct: 7 RREAVRSEKKTLPWRKKRSSRGCCWRRRVATAVGEEESRRLMEKTRRD 54
Score = 25.4 bits (53), Expect = 6.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 36 KEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIA----EERRLQSPKKEDRNRRRKK 203
K+ RRR++ E RL + E RR ++ EERR ++ +E+ RRR+K
Sbjct: 70 KKKLYRRRRRYLGEETDRLAAEAGEEELRRLLENKRRGREEEERRRRNQIEEEERRRRRK 129
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 59 KEDCNRRRKKIAIAEERKLQSPKNENCNRR----RKKTAIAEERRPQSPKKEDCNRRRKK 226
K+ RRR++ E +L + E RR +++ EERR ++ +E+ RRR+K
Sbjct: 70 KKKLYRRRRRYLGEETDRLAAEAGEEELRRLLENKRRGREEEERRRRNQIEEEERRRRRK 129
>At1g37020.1 68414.m04616 Ulp1 protease family protein
Length = 611
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTA 140
+E LQ K+ ++KK AI ++ + PKK+ + MK +
Sbjct: 259 KELELQLKIKDATKGKKKKVAIMPKKASKIPKKKMAKVKEMKVS 302
>At1g30060.1 68414.m03675 COP1-interacting protein-related similar
to COP1-interacting protein 4.1 (CIP4.1) [Arabidopsis
thaliana] GI:13160650, COP1-interacting protein 4 (CIP4)
[Arabidopsis thaliana] GI:13160646
Length = 176
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQS 98
R EE+ ++ K E N+ RKK + ++ + L+S
Sbjct: 93 RVEEKEMRKSKSESDNKSRKKPSSSKAKGLES 124
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 147 EERRLQSPKKEDRNRRRKKTAIAEERRLQS 236
EE+ ++ K E N+ RKK + ++ + L+S
Sbjct: 95 EEKEMRKSKSESDNKSRKKPSSSKAKGLES 124
>At5g62750.1 68418.m07877 expressed protein predicted proteins,
Caenorhabditis elegans
Length = 124
Score = 25.4 bits (53), Expect = 6.4
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +2
Query: 32 EERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCN 211
EE+ KE+ + + +K E++K + K++N + + E++ +S KK+
Sbjct: 5 EEKVKNHDNKEEEHNKAEKAEKKEKKKDKDKKDKNEDDKNGGGEEGEDQEKKSKKKD--- 61
Query: 212 RRRKKTAIAEERRLQSPKKEDLQ 280
++ KK E+++ K LQ
Sbjct: 62 KKAKKEKNPEDKKDPEKLKMKLQ 84
>At5g54920.1 68418.m06840 expressed protein
Length = 517
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 84 RRLQSPKKENCNRRRMKTAIAEER--RLQSPKKEDRNR 191
RR S K+ENC + +T + E ++ P + D N+
Sbjct: 140 RRRNSAKRENCLESKARTLTSGETAGAMKEPGRRDENK 177
>At5g48690.1 68418.m06025 hypothetical protein
Length = 301
Score = 25.4 bits (53), Expect = 6.4
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKN-ENCNRRRKKTAIAEERRPQ 187
R K + R+L+ ++ R R+K I ++L K N R++ A+ + + +
Sbjct: 64 RAKELSEQARKLREEQETKREREREKERIRAGKELMETKRIAEENERKRNIALRKAEKDE 123
Query: 188 SPK-KEDCNRRRKKTAIAEERRLQSPKKEDLQS 283
K +E + + +RRL P + + S
Sbjct: 124 EKKAREKIMLKVNADKLERKRRLGLPTETESAS 156
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 25.4 bits (53), Expect = 6.4
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 11 RKKTAIAEERRLQSPKKEDCN-RRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQ 187
R++ +++ + KED + R +K+ KLQ N+ RR+ ER P
Sbjct: 1088 RRRLSLSSTDSEDAVIKEDYDVRNEEKLPCHTSDKLQKGPNKLIRRRKPLAKHTTERSPI 1147
Query: 188 SPKKEDCNRRRKKTAIAEERRLQS-PKKEDL 277
D + R K A+ +L S P K+ L
Sbjct: 1148 KDLSVD-DGRPKPIALKPLEKLSSKPSKKKL 1177
>At4g36700.1 68417.m05208 cupin family protein low similarity to
preproMP27-MP32 from Cucurbita cv. Kurokawa Amakuri
[GI:691752]; contains Pfam profile PF00190: Cupin
Length = 522
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 56 KKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERR---PQSPKKEDCNRRRK 223
KK D R+R+ +ERK + + + R+K EE++ PQ P +E+ R R+
Sbjct: 453 KKIDDERKRRH----DERKKEEEEAKREEEERRKREEEEEKKRWPPQQPPQEEELRERQ 507
>At4g19150.1 68417.m02825 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 243
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 62 EDCNRRRKKIAIAEERKLQSPKNENCNRRR--KKTAIAEERRPQSPKKEDCNRRRKKTAI 235
E+C + +K + E+K + K E+C+ K + ++E+ + + KK +
Sbjct: 166 EECEEQARKAKVNNEKKTEIVKPESCSNEGDVKDLKRKDSEDGNEGEEEEASSKPKKPKV 225
Query: 236 A 238
A
Sbjct: 226 A 226
>At4g00820.1 68417.m00113 calmodulin-binding protein-related
contains Pfam profile PF00612: IQ calmodulin-binding
motif
Length = 534
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +2
Query: 143 RRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDLQSP 286
+ R ++ A +RP +P+KE + RK+ + Q + L+SP
Sbjct: 441 KARIRSQSAPRQRPSTPEKERISSARKRLSFPVPPLPQQMDGQSLRSP 488
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 25.4 bits (53), Expect = 6.4
Identities = 14/76 (18%), Positives = 36/76 (47%)
Frame = +3
Query: 21 LQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRK 200
L+ KK + ++ T+ +++ + KKEN ++++ + +E P++ + +K
Sbjct: 333 LKRIKKNSPQKGKETTSKNQKKNDGNVKKENDHQKKSDGNVKKENSKVKPRELRSSTGKK 392
Query: 201 KTAIAEERRLQSPKKE 248
K + S K++
Sbjct: 393 KVEVENNNSKSSSKRK 408
>At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00575: S1 RNA binding domain
Length = 1168
Score = 25.4 bits (53), Expect = 6.4
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 75 AEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEE 221
AEERR + + + +RR +R + DR+R R++ EE
Sbjct: 118 AEERRREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDRERNRGDEE 166
>At3g22260.2 68416.m02814 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 245
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 212 DCSLLSSAIAVFFLRRLQSSFFGDCSFHSSAIAVF 108
D LLS +A + L LQ G+C F + A +F
Sbjct: 88 DHELLSGRLATYGLAELQMEGDGNCQFRALADQLF 122
>At3g22260.1 68416.m02813 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 240
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 212 DCSLLSSAIAVFFLRRLQSSFFGDCSFHSSAIAVF 108
D LLS +A + L LQ G+C F + A +F
Sbjct: 88 DHELLSGRLATYGLAELQMEGDGNCQFRALADQLF 122
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 25.4 bits (53), Expect = 6.4
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEE-RRPQS 190
K+ AE + S K+E+ +K+ + ++Q E ++ E P +
Sbjct: 59 KEAPAAEAEKSVSVKEEETVVVAEKVVVLTAEEVQKKALEEFKELVREALNKREFTAPVT 118
Query: 191 PKKEDCNRRRKKTAIAEERRLQSPKKED 274
P KE+ +K +E KKE+
Sbjct: 119 PVKEEKTEEKKTEEETKEEEKTEEKKEE 146
>At1g65130.1 68414.m07384 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1086
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/78 (23%), Positives = 29/78 (37%)
Frame = +2
Query: 14 KKTAIAEERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSP 193
++ A + +QS +ED K A L CN + K + R+P S
Sbjct: 758 QEEATKGDSNMQSMPREDLETVNGKAATRYNSALDMMLKSLCNIKVLKEDLVNNRKPFSE 817
Query: 194 KKEDCNRRRKKTAIAEER 247
+ C R +A E+
Sbjct: 818 NQVPCALRDFFSAFVSEK 835
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 25.4 bits (53), Expect = 6.4
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
R E+ + +SP +R+ + + RR + + + R ++ E + +S + ED
Sbjct: 399 RSEKIQRRSPHGNGEGKRQHRDERDDGRR----QHDREDARELERKHRERKERESREDED 454
Query: 183 RNRRRKKTAIAEERRLQSPKKED 251
R RRR++ E R +S ++ D
Sbjct: 455 RRRRRRR---EESRDKESRRERD 474
>At1g53110.1 68414.m06014 expressed protein
Length = 439
Score = 25.4 bits (53), Expect = 6.4
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 39 EDCNRRRKKTAIAEERRLQSPKKENCNRRRM-KTAIAEERRLQSPKKEDRNRRRKKTAIA 215
E+ + +K+ E+ RL +K + + K I ++ + +KE R +KK A+
Sbjct: 293 EETLKEKKREEQLEKARLAMERKRKLHEKAAAKAVIRVKKEAEKKRKELDKRAKKKKAVC 352
Query: 216 E 218
+
Sbjct: 353 K 353
>At1g49480.1 68414.m05546 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 226
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 101 EERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRK--KTAIAEERRLQSPKKE 271
E + ++PK R+KK EE +P +D R K ++A A +R + + ++E
Sbjct: 55 ESKAEETPKVLKKRGRKKKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERE 113
>At1g24220.1 68414.m03054 paired amphipathic helix repeat-containing
protein weak similarity to transcription co-repressor
Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 744
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +3
Query: 60 KKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNR----RRKKTAIAEERR 227
K T + R SPK + K E + P++ +RNR KKT E++R
Sbjct: 587 KATIPPKSSRTISPKANRTIPPKSKKTFPREAKRTIPREANRNRIMPSEAKKTIHPEDKR 646
Query: 228 LQSP 239
P
Sbjct: 647 TTRP 650
>At4g31520.1 68417.m04476 SDA1 family protein contains Pfam profile
PF05285: SDA1
Length = 698
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 84 RRLQSPKKENCNRRRMKTAIAEER-RLQSPKKEDRNRRRKKTAIAEER 224
++L +P K + R+ I EER L +EDR + + KTAI +++
Sbjct: 604 KKLVNPAKLEAHIRQK--LIKEERLELVKAGREDRGKYKSKTAIKQKK 649
>At4g21500.1 68417.m03108 expressed protein ; expression supported
by MPSS
Length = 215
Score = 25.0 bits (52), Expect = 8.4
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 165 IAVFFLRRLQFSFFGDCSFLSSAIAIFFLRRLQSSFFGDCSLLSSAIAVFFLRL 4
+ VFF FS F L S I I+F L F L+S A+ + LRL
Sbjct: 6 LQVFFFSHPLFSIF---ITLYSLILIYFPNDLLRIFLSPVLLISGALLLSLLRL 56
>At4g15030.1 68417.m02309 expressed protein
Length = 179
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/83 (19%), Positives = 33/83 (39%)
Frame = +2
Query: 35 ERRLQSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNR 214
E+ + + K + + K+ E K S + + +RK+ +E + K+
Sbjct: 74 EKEVMTGKAGEDKQALVKLVACERSKSHSEDDTDEEEKRKEGERSESNEKKKQKRNRSQS 133
Query: 215 RRKKTAIAEERRLQSPKKEDLQS 283
+ E+RR +K L+S
Sbjct: 134 HSEYDTDEEDRRKGKTRKSKLES 156
>At4g00250.1 68417.m00032 DNA-binding storekeeper protein-related
contains Pfam profile: PF04504 protein of unknown
function, DUF573; similar to storekeeper protein
GI:14268476 [Solanum tuberosum]
Length = 319
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 51 RRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEE 221
RR+KK AE ++S KK R + + + + ++ KKED N++ + E
Sbjct: 70 RRKKKEGAAESPAVKSGKK-----RAGEGSTSRDMHVKRVKKEDDNKKANPQRVWSE 121
>At3g43680.1 68416.m04657 hypothetical protein
Length = 539
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 153 RRLQSPKKEDRNRRRKKTAIAEERRLQSPK 242
R + + KKED+ RR + E RL SP+
Sbjct: 169 REVYAKKKEDKERRLAEDKRLAEARLISPR 198
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 25.0 bits (52), Expect = 8.4
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 71 NRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQ-SPKKEDCNRRRKKTAIAEER 247
++ RKK E ++ +++KK +E +PQ SP+K R+ + I EE
Sbjct: 389 HKSRKKNKENSEHDSTPHESNGKTKKKKKKKTHKEEQPQTSPRK----RKHRGGWITEEP 444
Query: 248 RLQSPKKEDLQSPK 289
+S ++ ++ PK
Sbjct: 445 EEESFQRGKMRRPK 458
>At3g12670.1 68416.m01579 CTP synthase, putative / UTP--ammonia
ligase, putative similar to SP|P17812 CTP synthase (EC
6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains
Pfam profile PF00117: glutamine amidotransferase class-I
Length = 591
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 195 FGDCGLLSSAIAVFFLRRLQFSFFGDCSFLSSAIAIF 85
FGD G+ +A + R Q F G C + A+ F
Sbjct: 371 FGDRGVQGKILATKYARENQVPFLGICLGMQLAVVEF 407
>At2g41460.1 68415.m05122 apurinic endonuclease-redox protein /
DNA-(apurinic or apyrimidinic site) lyase identical to
apurinic endonuclease-redox protein SP: P45951 from
[Arabidopsis thaliana]
Length = 536
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/68 (17%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 24 QSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERR--LQSPKKEDRNRRR 197
+ P +++C E+R++ ++N + AIA+E++ +++ K++ +++
Sbjct: 160 EEPTEDECTNSEAYDIEHGEKRVKQSTEKNLKAKVSAKAIAKEQKSLMRTGKQQIQSKEE 219
Query: 198 KKTAIAEE 221
+ I+ E
Sbjct: 220 TSSTISSE 227
>At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase family
protein contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 1307
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 47 QSPKKEDCNRRRKKIAIAEERKLQSPKN-ENCNRRRKKTAIAEERR 181
Q KK + RRK+I E+ KL + E+C RR+K + + E R
Sbjct: 193 QRVKKPEGFGRRKEIK--EDVKLNERYDCEHCGRRKKSSELESESR 236
>At1g67590.1 68414.m07700 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 347
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 47 QSPKKEDCNRRRKKIAIAEERKLQSPKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKK 226
++ +K KK+ + ER + + N+ IAEERR + K N + K
Sbjct: 259 ENHEKRKAEMEMKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAK--LNEKAVK 316
Query: 227 TA 232
T+
Sbjct: 317 TS 318
>At1g65090.1 68414.m07379 expressed protein
Length = 284
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/75 (21%), Positives = 36/75 (48%)
Frame = +3
Query: 3 RGEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEERRLQSPKKED 182
RG+E + KED ++ T++ E+ R + + + R ++ ++++ + K E+
Sbjct: 117 RGKEEPIPIQVKEDEEMAKESTSLLEKIRDEGRTDKETSERTLQ----DDKKSGNAKSEE 172
Query: 183 RNRRRKKTAIAEERR 227
+ +K E RR
Sbjct: 173 VQEQPEKREAPETRR 187
>At1g15660.1 68414.m01880 expressed protein similar to CENPCA
protein (GI:11863170) {Zea mays}
Length = 705
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 27 SPKKEDCNRRRKKTAIAEERRLQSPKKENCNRRRMKTAIAEER--RLQSPKKEDRNRRRK 200
S K+ + R+R + ++R ++ E ++MKT E R + K +R ++
Sbjct: 549 SHKQTNKRRKRGSSDSNVKKRSKTVHGETGGDKQMKTLPHESRAKKQTKGKSNEREEKKP 608
Query: 201 KTAIAEERRLQSPKK 245
K + E +L S +K
Sbjct: 609 KKTLTHEGKLFSCRK 623
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,336,592
Number of Sequences: 28952
Number of extensions: 133210
Number of successful extensions: 2032
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 261894672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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