Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L02
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 87 6e-18
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 87 6e-18
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 87 6e-18
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 87 6e-18
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 87 6e-18
AL132863-8|CAB60576.2| 519|Caenorhabditis elegans Hypothetical ... 29 2.8
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 28 4.8
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 87.4 bits (207), Expect = 6e-18
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 14/144 (9%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
++R++++N+RL +E+ WWDAF+ EFF+DD L E +RY
Sbjct: 100 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 159
Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
I R IP++FRSI++ G+ EL Y +R P + N S + ++ +T + + +V
Sbjct: 160 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 219
Query: 464 CTEGRLILEFT-FDDLM--RIKSW 526
TEG+L +EF FD++M RIK+W
Sbjct: 220 NTEGKLYVEFAPFDEVMNYRIKAW 243
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 87.4 bits (207), Expect = 6e-18
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 14/144 (9%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
++R++++N+RL +E+ WWDAF+ EFF+DD L E +RY
Sbjct: 49 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 108
Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
I R IP++FRSI++ G+ EL Y +R P + N S + ++ +T + + +V
Sbjct: 109 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 168
Query: 464 CTEGRLILEFT-FDDLM--RIKSW 526
TEG+L +EF FD++M RIK+W
Sbjct: 169 NTEGKLYVEFAPFDEVMNYRIKAW 192
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 87.4 bits (207), Expect = 6e-18
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 14/144 (9%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
++R++++N+RL +E+ WWDAF+ EFF+DD L E +RY
Sbjct: 63 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 122
Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
I R IP++FRSI++ G+ EL Y +R P + N S + ++ +T + + +V
Sbjct: 123 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 182
Query: 464 CTEGRLILEFT-FDDLM--RIKSW 526
TEG+L +EF FD++M RIK+W
Sbjct: 183 NTEGKLYVEFAPFDEVMNYRIKAW 206
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 87.4 bits (207), Expect = 6e-18
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 14/144 (9%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
++R++++N+RL +E+ WWDAF+ EFF+DD L E +RY
Sbjct: 50 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 109
Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
I R IP++FRSI++ G+ EL Y +R P + N S + ++ +T + + +V
Sbjct: 110 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 169
Query: 464 CTEGRLILEFT-FDDLM--RIKSW 526
TEG+L +EF FD++M RIK+W
Sbjct: 170 NTEGKLYVEFAPFDEVMNYRIKAW 193
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 87.4 bits (207), Expect = 6e-18
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 14/144 (9%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATLTLTFCLED----GPKRYT 289
++R++++N+RL +E+ WWDAF+ EFF+DD L E +RY
Sbjct: 63 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRERYI 122
Query: 290 IGRTLIPRYFRSIYEGGVSELYYTMRQPKE--SFHNTSITLDCDHCTMVTHHGKPIFTKV 463
I R IP++FRSI++ G+ EL Y +R P + N S + ++ +T + + +V
Sbjct: 123 INRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFEV 182
Query: 464 CTEGRLILEFT-FDDLM--RIKSW 526
TEG+L +EF FD++M RIK+W
Sbjct: 183 NTEGKLYVEFAPFDEVMNYRIKAW 206
>AL132863-8|CAB60576.2| 519|Caenorhabditis elegans Hypothetical
protein Y37H2A.7 protein.
Length = 519
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 323 SIYEGGVSELYYTMRQPKESFHNTSITLDCDH 418
S+ E G+S+LY M+ PK S +T C++
Sbjct: 174 SVVEAGLSDLYRIMKNPKFSLETLDVTF-CEY 204
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 137 DYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTL 253
D YE+ + L+ +T ++ W F E +DD TL
Sbjct: 744 DVEAYEITEDLESQTYEASQSDWKEFCLEDVDDDVDETL 782
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 104 DRRHAPYFGQPDYRVYELNKRLQQ-RTEDSDNLW 202
D+ H YFG+ RV+ LNK T + + LW
Sbjct: 46 DKYHPGYFGKVGMRVFHLNKNQHYCPTVNVERLW 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,033,840
Number of Sequences: 27780
Number of extensions: 184177
Number of successful extensions: 410
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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