Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L01
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.60 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 399 SLHHWKGNRRLGPRPHPQTR*PMHRPPGIPHL 494
           S HH  GN  +GP   P      H+   + HL
Sbjct: 333 SPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHL 364


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 244 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 339
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 145 PSRHFRSGLR 116
           P RH+RSGL+
Sbjct: 139 PLRHYRSGLK 148


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 143 QQAFPIWTPA 114
           +QAFP W P+
Sbjct: 237 RQAFPFWLPS 246


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 143 QQAFPIWTPA 114
           +QAFP W P+
Sbjct: 237 RQAFPFWLPS 246


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 275 ARGTCLPAPVSLKNVL 228
           A GTC   P  L+N++
Sbjct: 6   ATGTCQKKPTKLRNLI 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,271
Number of Sequences: 438
Number of extensions: 4187
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)