Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K24
(525 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868... 77 1e-14
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081... 76 2e-14
01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601... 64 9e-11
01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678... 63 1e-10
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051... 63 2e-10
03_02_0387 - 8016399-8016575,8016661-8016788,8017073-8017214,801... 56 1e-08
01_07_0050 - 40751994-40752086,40752193-40752300,40752501-407526... 55 3e-08
10_02_0148 - 5859664-5859828,5859916-5860043,5860310-5860451,586... 36 0.015
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335 33 0.19
02_05_1150 + 34481965-34482076,34482174-34482268,34482380-344824... 31 0.57
06_03_1058 + 27254195-27254382,27255041-27255116,27255254-272554... 29 1.7
04_04_0960 + 29704009-29705679 27 7.0
01_06_0584 - 30407012-30408531,30408625-30408955 27 7.0
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 27 9.2
05_06_0164 + 26085766-26085799,26086908-26087030,26087406-260875... 27 9.2
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 27 9.2
>10_08_0921 +
21586034-21586229,21586464-21586576,21586768-21586875,
21586967-21587205,21587301-21587399,21587448-21587535,
21587617-21587750,21588274-21588362,21588718-21588751,
21588830-21588898,21589216-21589339
Length = 430
Score = 76.6 bits (180), Expect = 1e-14
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 14/117 (11%)
Frame = +3
Query: 216 DGEFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFH 395
D + + F N+Y+GLS+HP + AA + ++YG G ICG T HK +E LA+
Sbjct: 77 DEKLILFSGNDYMGLSSHPAIRHAAVKAAEEYGMGPRGSALICGYTTYHKMVEESLAELK 136
Query: 396 GREDAILYGSCFDAN------AGLFESMLT-----PED---AVFSDALNQASIIDGI 524
+ED +L + F AN G S+L ED A+FSDALN ASIIDGI
Sbjct: 137 KKEDCLLCPTGFSANMAVMTALGNISSLLAAGRKPAEDERIAIFSDALNHASIIDGI 193
>01_06_0628 +
30707353-30707548,30707846-30707958,30708090-30708197,
30708305-30708543,30708774-30708861,30708942-30709075,
30709285-30709498,30709671-30709759,30710194-30710262,
30710560-30710683
Length = 457
Score = 76.2 bits (179), Expect = 2e-14
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 14/117 (11%)
Frame = +3
Query: 216 DGEFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFH 395
D + + F N+Y+GLS+HP + +AA + ++YG G ICG T HK +E LA+
Sbjct: 77 DEKLILFSGNDYMGLSSHPAIRKAAVKAAQEYGMGPRGSALICGYTTYHKLVEESLAELK 136
Query: 396 GREDAILYGSCFDAN------AGLFESMLT----PED----AVFSDALNQASIIDGI 524
+ED +L + F AN G S+L+ P + AVFSDALN ASIIDGI
Sbjct: 137 KKEDCLLCPTGFSANMAVMTALGSVSSILSVGRKPAEGERIAVFSDALNHASIIDGI 193
>01_07_0051 -
40759529-40759624,40759728-40759835,40759972-40760138,
40760670-40760796,40760885-40761046,40761235-40761398,
40761561-40761654,40761736-40761860,40762304-40762449,
40762796-40762884,40763453-40763518,40763824-40763973
Length = 497
Score = 63.7 bits (148), Expect = 9e-11
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +3
Query: 228 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGRE 404
LN + NYLG + E E LKKY A SVR G +H ELE +A+F G+
Sbjct: 111 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKP 170
Query: 405 DAILYGSCFDANAGLFESMLTPEDAVFSDALNQASIIDG 521
AIL+G + N+ + +++ + SD+LN SI++G
Sbjct: 171 AAILFGMGYVTNSAIIPALIGKGGLIISDSLNHNSIVNG 209
>01_07_0052 -
40767252-40767347,40767455-40767562,40767689-40767855,
40767930-40768056,40768138-40768299,40768467-40768630,
40768722-40768815,40768892-40769016,40769110-40769255,
40769361-40769449,40769564-40769608,40770165-40770230,
40770332-40770457
Length = 504
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +3
Query: 228 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGRE 404
LN + NYLG + E E LKKY A SVR G +H ELE +A+F G+
Sbjct: 118 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKP 177
Query: 405 DAILYGSCFDANAGLFESMLTPEDAVFSDALNQASIIDG 521
AIL+G + N+ + +++ + SD+LN SI++G
Sbjct: 178 AAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNG 216
>11_04_0455 +
17903921-17904046,17904149-17904214,17905028-17905116,
17905513-17905658,17905743-17905867,17905964-17906057,
17906144-17906307,17906449-17906610,17906683-17906809,
17906854-17906862,17906912-17907078,17907113-17907307,
17907398-17907490
Length = 520
Score = 62.9 bits (146), Expect = 2e-10
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +3
Query: 228 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGRE 404
LN + NYLG + E E LKKY SVR GT +H ELE +A+F G+
Sbjct: 103 LNLGSYNYLGFAAADEYCTPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKP 162
Query: 405 DAILYGSCFDANAGLFESMLTPEDAVFSDALNQASIIDG 521
AIL+G + N+ + ++ + SD+LN SI++G
Sbjct: 163 AAILFGMGYVTNSAIIPCLVGKGGLIISDSLNHNSIVNG 201
>03_02_0387 -
8016399-8016575,8016661-8016788,8017073-8017214,
8017301-8017396,8017572-8017712,8017857-8018031,
8018443-8018575,8018661-8018733,8018807-8018900,
8019890-8019981,8020091-8020185,8020267-8020378
Length = 485
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 216 DG-EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQF 392
DG E +NF + NYLGL + +++++ L+KYG G R GT +H + E ++A+F
Sbjct: 109 DGKEVINFASANYLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIAKF 168
Query: 393 HGREDAILY 419
G D+ILY
Sbjct: 169 LGTPDSILY 177
>01_07_0050 -
40751994-40752086,40752193-40752300,40752501-40752667,
40752756-40752882,40752984-40753145,40753674-40753837,
40753931-40754024,40754160-40754284,40754387-40754532,
40754676-40754764,40755524-40755589,40755990-40756148
Length = 499
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 228 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGRE 404
LN + NYLG + E E LKKY A S R G +H ELE +A+F +
Sbjct: 114 LNLASFNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGNTQLHIELEELVARFVRKP 173
Query: 405 DAILYGSCFDANAGLFESMLTPEDAVFSDALNQASIIDG 521
AIL + N+ + +++ + SD+LN SI+ G
Sbjct: 174 SAILLAMGYATNSAIIPALIGKGGLIISDSLNHNSIVSG 212
>10_02_0148 -
5859664-5859828,5859916-5860043,5860310-5860451,
5860548-5860643,5860836-5860976,5861799-5861973,
5862416-5862702,5862777-5862870,5863244-5863335,
5863459-5863553,5863648-5863759
Length = 508
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 216 DG-EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGT 350
DG E +NF + NYLGL + +++++ ++KYG G R GT
Sbjct: 109 DGKEVVNFASANYLGLIGNEKIIDSCVGSVEKYGVGSCGPRSFYGT 154
>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
Length = 377
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 108 REVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCANNYLG--LSNHPEVV 281
+E E +E++R + + + S +V+ QG+DG N N + G L+ P+VV
Sbjct: 226 KEQYEGLQRELQRLQALHSQAIGASGSGDQVETQGADGNQPNLTENTHQGDTLAGDPQVV 285
Query: 282 EAARE 296
+ A E
Sbjct: 286 KLAEE 290
>02_05_1150 +
34481965-34482076,34482174-34482268,34482380-34482471,
34482878-34482971,34483191-34483354,34483755-34483929,
34484017-34484157,34484357-34484452,34484549-34484690,
34484953-34485080,34485179-34485343
Length = 467
Score = 31.1 bits (67), Expect = 0.57
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 216 DG-EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQF 392
DG E +NF + NYLGL + +++ G L+ + F +H + E ++A+F
Sbjct: 109 DGKEVVNFASANYLGLIGNEKIL----------GRNLAILLF----SDVHLDCETKIAKF 154
Query: 393 HGREDAILY 419
G +D+ILY
Sbjct: 155 LGTQDSILY 163
>06_03_1058 +
27254195-27254382,27255041-27255116,27255254-27255418,
27255580-27255671,27255713-27255754,27256342-27256387,
27258456-27258683
Length = 278
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +3
Query: 258 LSNHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGREDAILYGSCFDA 437
L N + +EA+ ++ G LSSV + + +LE L++ H R+D ++ D
Sbjct: 97 LRNEIDQLEASLR--RQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDM 154
Query: 438 NAGLFESMLTPEDAVFSD 491
+ S++ VF+D
Sbjct: 155 RRMVHYSLIVVAVVVFAD 172
>04_04_0960 + 29704009-29705679
Length = 556
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3
Query: 493 ASENTASSGVSIDSKRPALASKHDPYRIASS 401
AS+++ASS S D+KRPA A P RI SS
Sbjct: 525 ASDHSASSSSSRDAKRPAAA----PGRIGSS 551
>01_06_0584 - 30407012-30408531,30408625-30408955
Length = 616
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 243 NNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGT 350
++Y+GL EAA+ + GAG V CGT
Sbjct: 117 DSYVGLHTSKLASEAAKYVKRSLGAGAEDVLLFCGT 152
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 87 RAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQ 209
R +RE +E+ + ++ A+ W+ ERV D K ++
Sbjct: 248 RRECVSMREEMEEERRMLQMAEVWREERVQMKLSDAKAVLE 288
>05_06_0164 +
26085766-26085799,26086908-26087030,26087406-26087525,
26087632-26087696
Length = 113
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 93 GVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVK 203
G A +++ +++K+ K WKH + +T Q +K++
Sbjct: 2 GCAGSTPKVDENSKKLKKPKPWKHTQAITPTQLSKMR 38
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 102 KLREVLEDRLQEIKRAKTWKHERVLTSPQDTKV 200
KLRE +++ + ++ A+ W+ ERV D K+
Sbjct: 354 KLREEVDEERKMLQMAEVWREERVQMKLVDAKL 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,028,905
Number of Sequences: 37544
Number of extensions: 252523
Number of successful extensions: 718
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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