Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K24
(525 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29250| Best HMM Match : Aminotran_1_2 (HMM E-Value=7.4e-07) 133 7e-32
SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26) 62 3e-10
SB_11194| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28) 44 8e-05
SB_28731| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_22866| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_35564| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43) 29 1.8
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 28 4.1
SB_39357| Best HMM Match : SASP_gamma (HMM E-Value=1.7) 28 5.4
SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17) 28 5.4
SB_9099| Best HMM Match : SASP_gamma (HMM E-Value=1.7) 28 5.4
SB_32655| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05) 28 5.4
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 27 9.5
SB_46267| Best HMM Match : zf-GRF (HMM E-Value=0.0093) 27 9.5
>SB_29250| Best HMM Match : Aminotran_1_2 (HMM E-Value=7.4e-07)
Length = 252
Score = 133 bits (322), Expect = 7e-32
Identities = 62/87 (71%), Positives = 72/87 (82%)
Frame = +3
Query: 264 NHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGREDAILYGSCFDANA 443
++ EVV AA+E L KYG GLSSVRFICGTQ IHK LE ++++FHG EDAILY C+DAN
Sbjct: 1 SNAEVVNAAKEALMKYGNGLSSVRFICGTQDIHKTLEAKISKFHGMEDAILYACCYDANT 60
Query: 444 GLFESMLTPEDAVFSDALNQASIIDGI 524
GLFES+LT EDAVFSD LN AS+IDGI
Sbjct: 61 GLFESLLTAEDAVFSDELNHASMIDGI 87
>SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26)
Length = 391
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +3
Query: 210 GSDGEFLNFCANNYLGLS-NHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLA 386
G+ + LN + NYLG + N + A + + K G + S R GT IH ELE +A
Sbjct: 98 GTKTKALNLGSYNYLGFAENEGLCADEAEKSVHKNGIAVCSARHEFGTLDIHIELEKMVA 157
Query: 387 QFHGREDAILYGSCFDANAGLFESMLTPEDAVFSDALNQASIIDG 521
+F G+E A+++G F N+ +++ D + SD LN +S++ G
Sbjct: 158 RFVGKESAMVFGMGFATNSTNIPVLVSKGDLIISDELNHSSLVLG 202
>SB_11194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 57.6 bits (133), Expect = 6e-09
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +3
Query: 294 EGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGREDAILYGSCFDANAGLFESM--LT 467
E + +G G R I GT + H++LE LAQ H +E A+L+ SC+ AN ++
Sbjct: 248 ETIDVHGVGAGGTRNISGTSSYHEQLEKVLAQLHQKEAALLFTSCYVANDTTLYTLGKHL 307
Query: 468 PEDAVFSDALNQASIIDGI 524
P +FSDA N AS+I GI
Sbjct: 308 PGCLIFSDAGNHASMIQGI 326
>SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28)
Length = 595
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 348 TQTIHKELEHRLAQFHGREDAILYGSCFDANAGLFESMLTPEDAVFSDALNQASIIDG 521
T IH ELE +A+F G+E A+++G F N+ +++ D + SD LN +S++ G
Sbjct: 2 TLDIHIELEKMVARFVGKESAMVFGMGFATNSTNIPVLVSKGDLIISDELNHSSLVLG 59
>SB_28731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 357 IHKELEHRLAQFHGREDAILYGSCFDANAGLFESMLTPEDAVFSD 491
+H LE RLA+F E+AILY F A + D +F D
Sbjct: 2 VHLHLEERLAKFMHTEEAILYSYGFSTVASAIPAYSKRGDVLFCD 46
>SB_22866| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 318 GLSSVRFICGT-QTIHKELEHRLAQFHGREDAILYGSCFDANAGLFESMLTPEDAVF 485
G +S + I GT + +H+E + R+ Q + D L+G+ N G + P +A++
Sbjct: 108 GSTSNKMIYGTNEMLHQENQRRVKQQQEKADGFLFGTDAATNVGKQQEKRKPNNALY 164
>SB_35564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 105 LREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCANNYLGLSNHP-EVV 281
L +ED+ + ++ K+ R+ P+D + + +DG+ +N N LG++ P ++
Sbjct: 220 LMNEIEDKFGKSEQYSRQKNIRIGGIPEDDSEEREQTDGKVINLIKEN-LGITILPTDIC 278
Query: 282 EAAREGLKKYGAGLSSVRF 338
+ R G KK V+F
Sbjct: 279 RSHRTGKKKDSKPRQIVKF 297
>SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43)
Length = 1602
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 41 STMSNTSATRVEKQGTCRSCKASG 112
ST+S+TSA+ V+K+ TC+ CK G
Sbjct: 634 STLSSTSAS-VKKEATCQYCKKKG 656
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 447 DRH*HRNMTHTGSHLHGRETGPNDALIPYELFESH 343
D H H + H SH H E P L +E F+S+
Sbjct: 353 DNHGHSHENHGHSHGHSHEHEPKQDLYHHEDFDSY 387
>SB_39357| Best HMM Match : SASP_gamma (HMM E-Value=1.7)
Length = 244
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 66 HELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCAN 245
HE + + V+++R++L+D L E + E VL S + + +V+G+D N +
Sbjct: 85 HEQPSSQYKTVSQVRQILQDELDEFR-------ESVLESMETDRSEVRGNDDSRGNELNS 137
Query: 246 NYLGLSNHPEVVEAARE 296
L +H ++ A++
Sbjct: 138 GAEPLVDHEGDIQDAKD 154
>SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17)
Length = 473
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 66 HELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCAN 245
HE + + V+++R++L+D L E + E VL S + + +V+G+D N +
Sbjct: 177 HEQPSSQYKTVSQVRQILQDELDEFR-------ESVLESMETDRSEVRGNDDSRGNELNS 229
Query: 246 NYLGLSNHPEVVEAARE 296
L +H ++ A++
Sbjct: 230 GAEPLVDHEGDIQDAKD 246
>SB_9099| Best HMM Match : SASP_gamma (HMM E-Value=1.7)
Length = 200
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 66 HELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCAN 245
HE + + V+++R++L+D L E + E VL S + + +V+G+D N +
Sbjct: 41 HEQPSSQYKTVSQVRQILQDELDEFR-------ESVLESMETDRSEVRGNDDSRGNELNS 93
Query: 246 NYLGLSNHPEVVEAARE 296
L +H ++ A++
Sbjct: 94 GAEPLVDHEGDIQDAKD 110
>SB_32655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 351 QTIHKELEHRLAQFHGREDAILYGSCFDANAGLFESMLTPEDAV 482
Q + K+L+ + + + +Y SC N ES+L P+D V
Sbjct: 340 QAVTKQLKETVNEIQDKIGKRIYESCVKGNLPSGESLLEPDDIV 383
>SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05)
Length = 1188
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 129 LQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCANNYLGL 260
L E+K K W LT P DT + +D + F A+N + L
Sbjct: 905 LNELKN-KEWNDIAPLTDPNDTSLPRMYADDTIITFSASNLVEL 947
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/44 (27%), Positives = 27/44 (61%)
Frame = +3
Query: 75 KNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 206
+ ++RAG AK R + R++++KR + +H R + + K+++
Sbjct: 372 RERQRAG-AKRRAAIRIRMEQLKRKRELEHARKIEFLRRQKLRI 414
>SB_46267| Best HMM Match : zf-GRF (HMM E-Value=0.0093)
Length = 342
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 141 KRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCAN 245
K AK K + T P KVK +G +FL C N
Sbjct: 102 KEAKKTKAVPLWTPPSKKKVKGKGKGKKFLKTCVN 136
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,119,609
Number of Sequences: 59808
Number of extensions: 290804
Number of successful extensions: 749
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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