Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K24
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoy... 57 9e-09
U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoy... 57 9e-09
U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoy... 40 8e-04
U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoy... 40 8e-04
Z30662-5|CAA83134.1| 363|Caenorhabditis elegans Hypothetical pr... 30 0.88
Z72515-1|CAA96681.1| 419|Caenorhabditis elegans Hypothetical pr... 28 3.6
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF068712-1|AAC17779.1| 500|Caenorhabditis elegans Hypothetical ... 27 6.2
AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p4... 27 8.2
AF039050-2|AAC47935.1| 499|Caenorhabditis elegans Cytochrome p4... 27 8.2
AF003150-5|AAB54213.1| 474|Caenorhabditis elegans Hypothetical ... 27 8.2
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 27 8.2
>Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical
protein T25B9.1 protein.
Length = 420
Score = 182 bits (442), Expect = 2e-46
Identities = 85/136 (62%), Positives = 103/136 (75%)
Frame = +3
Query: 117 LEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCANNYLGLSNHPEVVEAARE 296
L++ L IK A T+K ERV+ Q VKV GSD +NFCANNYLGLS+HPEV+ A ++
Sbjct: 33 LKNELAGIKNAGTFKTERVIQGRQGVLVKVTGSDKPVINFCANNYLGLSSHPEVIAAGQK 92
Query: 297 GLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGREDAILYGSCFDANAGLFESMLTPED 476
L+ +GAGLSSVRFICGTQ IHKELE ++AQFHG ED ILY +CFDAN G+FE M +D
Sbjct: 93 ALETHGAGLSSVRFICGTQDIHKELEQKIAQFHGTEDTILYAACFDANGGIFEVMTGEQD 152
Query: 477 AVFSDALNQASIIDGI 524
++ SD LN ASIIDGI
Sbjct: 153 SIISDELNHASIIDGI 168
>Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical
protein T22G5.5 protein.
Length = 512
Score = 65.7 bits (153), Expect = 2e-11
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 201 KVQGSDGEFLNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQTIHKELEH 377
K G++ E +N + NYLG S+ V EAA + KYG R G HK +E
Sbjct: 128 KYTGTESEVINLGSYNYLGFSHRSGVCAEAAAAHIDKYGINCGGSRQEIGNHVAHKSVES 187
Query: 378 RLAQFHGREDAILYGSCFDANAGLFESMLTPEDAVFSDALNQASIIDG 521
+AQ+ EDAI++ F N+ S++ + SD LN AS++ G
Sbjct: 188 TIAQYLNVEDAIVFPMGFATNSMNIPSLVDKGSLILSDRLNHASLVTG 235
>U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform b protein.
Length = 434
Score = 56.8 bits (131), Expect = 9e-09
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Frame = +3
Query: 72 LKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLT-SPQDTKV-----------KVQGS 215
++N+ + KL + L +R Q+ + W E ++ +PQD V K
Sbjct: 1 MRNRSKRQQEKLSKKLTER-QKDELIADWTPEPLVPETPQDHPVLNPKYADGKMTKDVSI 59
Query: 216 DGE-FLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQF 392
DGE +LN + N+L + + A++ + KYG G R GT +H +LE LA+F
Sbjct: 60 DGEKYLNMASTNFLSFIGVKRIEDRAKQTIFKYGVGSCGPRGFYGTVDVHLDLEKELAKF 119
Query: 393 HGREDAILYGSCFDANAGLFESMLTPEDAVFSD 491
G E+A+LY F + + D +F D
Sbjct: 120 MGCEEAVLYSYGFATVSSAIPAYAKKGDVIFVD 152
>U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform a protein.
Length = 458
Score = 56.8 bits (131), Expect = 9e-09
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Frame = +3
Query: 72 LKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLT-SPQDTKV-----------KVQGS 215
++N+ + KL + L +R Q+ + W E ++ +PQD V K
Sbjct: 25 MRNRSKRQQEKLSKKLTER-QKDELIADWTPEPLVPETPQDHPVLNPKYADGKMTKDVSI 83
Query: 216 DGE-FLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQF 392
DGE +LN + N+L + + A++ + KYG G R GT +H +LE LA+F
Sbjct: 84 DGEKYLNMASTNFLSFIGVKRIEDRAKQTIFKYGVGSCGPRGFYGTVDVHLDLEKELAKF 143
Query: 393 HGREDAILYGSCFDANAGLFESMLTPEDAVFSD 491
G E+A+LY F + + D +F D
Sbjct: 144 MGCEEAVLYSYGFATVSSAIPAYAKKGDVIFVD 176
>U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform a protein.
Length = 558
Score = 40.3 bits (90), Expect = 8e-04
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Frame = +3
Query: 102 KLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCANNYLGLSNHP-EV 278
K+R+V E + + A +RV T + G+ +N + NYLG +
Sbjct: 135 KVRDVFERPICSVPGATVDLVDRVSHDGNWT-YEYPGTRTNVINVGSYNYLGFAQSAGPC 193
Query: 279 VEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGREDAILYGSCFDANAGLFES 458
E + + + G + G +LE +A+F G EDAI + F N+
Sbjct: 194 AEQSASSIDREGLSCCTTVHERGRSVSQAKLEKLVAEFLGVEDAICFSMGFATNSMNAPC 253
Query: 459 MLTPEDAVFSDALNQASIIDG 521
++ + SD N AS+I G
Sbjct: 254 LVDKHSLIISDKYNHASLILG 274
>U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform b protein.
Length = 586
Score = 40.3 bits (90), Expect = 8e-04
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Frame = +3
Query: 102 KLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCANNYLGLSNHP-EV 278
K+R+V E + + A +RV T + G+ +N + NYLG +
Sbjct: 163 KVRDVFERPICSVPGATVDLVDRVSHDGNWT-YEYPGTRTNVINVGSYNYLGFAQSAGPC 221
Query: 279 VEAAREGLKKYGAGLSSVRFICGTQTIHKELEHRLAQFHGREDAILYGSCFDANAGLFES 458
E + + + G + G +LE +A+F G EDAI + F N+
Sbjct: 222 AEQSASSIDREGLSCCTTVHERGRSVSQAKLEKLVAEFLGVEDAICFSMGFATNSMNAPC 281
Query: 459 MLTPEDAVFSDALNQASIIDG 521
++ + SD N AS+I G
Sbjct: 282 LVDKHSLIISDKYNHASLILG 302
>Z30662-5|CAA83134.1| 363|Caenorhabditis elegans Hypothetical
protein T16H12.8 protein.
Length = 363
Score = 30.3 bits (65), Expect = 0.88
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 433 MLMPVSSNLCLHLKTLCSRTLSTRRLSLMVS 525
ML+P+SS++C LKTL + + ++LM++
Sbjct: 11 MLIPISSSICFDLKTLQCWPMEIQEMALMLT 41
>Z72515-1|CAA96681.1| 419|Caenorhabditis elegans Hypothetical
protein T11A5.1 protein.
Length = 419
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +3
Query: 69 ELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCANN 248
++ NKE ++ + EV + R ++ +H L P +K + DG F+NF +
Sbjct: 121 QIANKEVPAISPIEEVSQKRRGRPRKTDAAQH---LFFPH-VSIKQEPDDG-FINFHESR 175
Query: 249 YLGLSNHPEV 278
+G++ PE+
Sbjct: 176 CVGIAQDPEM 185
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 72 LKNKERAGVAKL-REVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDGEFLNFCANN 248
++N+ + G K ED+L EIKR ++ + K ++ N AN
Sbjct: 217 MENRNKVGALKSGHRYFEDKLAEIKRLSLLDESILINEAGNIKSMADATESLVQNPSANT 276
Query: 249 YLGLSNHPEVVE 284
+ LS H VE
Sbjct: 277 PIPLSIHNVKVE 288
>AF068712-1|AAC17779.1| 500|Caenorhabditis elegans Hypothetical
protein T09H2.1 protein.
Length = 500
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 258 LSNHPEVVEAAREGLKKYGAGLSSVRFICGTQT 356
L NHPEVV+ ARE L G S+ T T
Sbjct: 324 LLNHPEVVKIAREELVHLTGGHRSISLTDKTST 356
>AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p450
family protein 34A6 protein.
Length = 498
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 249 YLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQTIH 362
++ L N+PEVVE R L + G+ SV + T++
Sbjct: 321 FVCLMNYPEVVEKLRNELTEVTGGMRSVSLADRSSTLY 358
>AF039050-2|AAC47935.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 34A5 protein.
Length = 499
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 258 LSNHPEVVEAAREGLKKYGAGLSSVRFICGTQT 356
L NHPEVVE R+ L + G SV QT
Sbjct: 324 LLNHPEVVEKLRKELIQITGGTRSVSLTDRAQT 356
>AF003150-5|AAB54213.1| 474|Caenorhabditis elegans Hypothetical
protein T05E7.1 protein.
Length = 474
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 111 EVLEDRLQEIKRAKTWKHERVLTSPQDTK 197
E + L ++KR WK E +T P TK
Sbjct: 437 EFFKKHLGDVKRIPEWKRESTVTLPVSTK 465
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 165 ERVLTSPQDTKVKVQGSDGEFLN-FCANNY 251
+R + SP++ + + ++GEF+N FC +Y
Sbjct: 859 DRAVLSPEEEQASMYNAEGEFVNPFCRLSY 888
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,086,333
Number of Sequences: 27780
Number of extensions: 216326
Number of successful extensions: 545
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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