Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K23
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   5.6  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   9.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   9.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.9  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 369 SPRTNATRVSSTPSSAFPRSRVCSHSGVVTSP 464
           S  T   + + TP S      VC+  G+V  P
Sbjct: 421 SSTTQKPQTTKTPESGNESDGVCTKEGIVRDP 452


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 280 ASQKVFGERDWIGEIRHFVRLC 215
           AS+KV  E+ WI     + RLC
Sbjct: 254 ASEKVTSEKSWIALNDDYNRLC 275


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 215 WSSLGGYLRTRKDFGTHGMEKPRKTNP 135
           W S  G+ R+   FG   +  P + NP
Sbjct: 177 WHSHSGFQRSDGTFGPFIVRVPEEDNP 203


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 467 HWRSYHARMRADPAPWECGR 408
           H   YH R  A   P++C +
Sbjct: 244 HHLEYHLRNHAGSKPFQCNK 263


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 467 HWRSYHARMRADPAPWECGR 408
           H   YH R  A   P++C +
Sbjct: 2   HHLEYHLRNHAGSKPFQCNK 21


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = -3

Query: 158 EKPRKTNPRFLIRRFGVIS*SQEHRGRCVPFLKFDRSRSLAVLHGGAAL 12
           + P  + P F  +R GVIS       + V   +   + +   +HGG  +
Sbjct: 8   DTPTSSAPAFSEQRGGVISEGVASSLQVVALFQLSETTAPRSIHGGTTV 56


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 118 TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 118 TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 118 TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 118 TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 118 TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 74  TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 103


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 118 TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 118 TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 TNATRVSSTPSSAFPRSRVCSHSGVVTSPM 467
           TN     STP  + P +   + S  +TSP+
Sbjct: 118 TNGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,015
Number of Sequences: 336
Number of extensions: 3069
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)