Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K21
         (485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   0.79 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   3.2  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   5.6  
EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle...    22   9.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   9.7  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 0.79
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 56  YTLSIFAAVLAAASGDVGLGYQYKVPHTSYGVPSYQF 166
           Y  S  AA  AAA+  V +     +PH+ YG  S  F
Sbjct: 24  YHQSAAAAAAAAANAPVYVPSSRALPHSQYGAHSANF 60


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 120 STRFLIHRTEYRRINSVKTQAFTDQASHRAATEVLRALTSKDSL 251
           S R+    T+YR++NS+ ++A  D +     T V  A+ S ++L
Sbjct: 274 SVRYNFRLTDYRKLNSILSRA--DWSFFYQCTSVDEAVQSFNAL 315


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 401 LNSDTKGHYYYPSSVNIGYGSS 466
           LN+D KGH +  + + I YG++
Sbjct: 157 LNNDMKGHDFIDNIMYIYYGTN 178


>EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle
           protein protein.
          Length = 178

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 113 GYQYKVPHTSYGVPSY 160
           GY Y  P   Y  P+Y
Sbjct: 77  GYAYAAPAVKYAAPAY 92


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +3

Query: 147 EYRRINSVKTQAFTDQASHRAATEVLRALTSKDSLHKVD 263
           E RR+N    +AFT + S       L  L + +   + D
Sbjct: 803 EIRRLNQENKEAFTSRMSLEVTKNKLENLLTNNLFRRKD 841


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,747
Number of Sequences: 2352
Number of extensions: 7935
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)