Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K21
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   4.0  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   4.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.2  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 334 TGST*SSLTYKASTRCWA 281
           +G   S + YK++  CWA
Sbjct: 244 SGRAKSEILYKSTLHCWA 261


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 334 TGST*SSLTYKASTRCWA 281
           +G   S + YK++  CWA
Sbjct: 244 SGRAKSEILYKSTLHCWA 261


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 286 NI*YWLYKSNYSKW 327
           NI Y+L  +NY+ W
Sbjct: 194 NIDYYLLAANYTGW 207


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 286 NI*YWLYKSNYSKW 327
           NI Y+L  +NY+ W
Sbjct: 194 NIDYYLLAANYTGW 207


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,925
Number of Sequences: 438
Number of extensions: 2085
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)