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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K20
         (637 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary...   320   2e-86
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar...   295   4e-79
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom...   269   3e-71
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ...   233   3e-60
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos...   211   9e-54
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet...   188   1e-46
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ...   183   3e-45
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w...   179   5e-44
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An...   178   8e-44
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n...   169   5e-41
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia...   144   2e-33
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ...   134   1e-30
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl...   125   8e-28
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ...   119   7e-26
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ...   113   3e-24
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha...   111   1e-23
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar...   108   1e-22
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar...    91   3e-17
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar...    80   4e-14
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan...    79   1e-13
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro...    76   8e-13
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae...    74   3e-12
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa...    72   1e-11
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum...    71   2e-11
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba...    71   2e-11
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba...    66   5e-10
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan...    66   9e-10
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus...    62   1e-08
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor...    62   1e-08
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph...    62   1e-08
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n...    60   4e-08
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured...    56   5e-07
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo...    52   1e-05
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell...    52   2e-05
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo...    51   2e-05
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960...    48   1e-04
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot...    47   4e-04
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno...    44   0.002
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r...    41   0.022
UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2; Nanoar...    37   0.47 
UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides im...    33   4.4  
UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4; ...    33   5.8  
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65; Reov...    33   7.6  

>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
           Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
           gambiae (African malaria mosquito)
          Length = 269

 Score =  320 bits (786), Expect = 2e-86
 Identities = 148/193 (76%), Positives = 171/193 (88%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237
           +VDPFTRKDWYDVKAP+MF  RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417
           ERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRV
Sbjct: 81  ERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRV 140

Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597
           FCIGFT KD++SQRKTCYAQH+Q++ IR KM  II R++TS++L+ VV KL+PDSIAKDI
Sbjct: 141 FCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDI 200

Query: 598 EKACHGIYPLRDV 636
           EKAC  +YPL DV
Sbjct: 201 EKACQVVYPLHDV 213


>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
           Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
           (Human)
          Length = 264

 Score =  295 bits (725), Expect = 4e-79
 Identities = 140/193 (72%), Positives = 162/193 (83%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237
           +VDPF++KDWYDVKAP+MF  R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D   
Sbjct: 21  VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417
           E +FRKF+LI EDVQG+N L NFHGMDLT DK+  MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78  EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137

Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597
           FC+GFT K     RKT YAQH QVR IRKKM EI+TR+V +++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197

Query: 598 EKACHGIYPLRDV 636
           EKAC  IYPL DV
Sbjct: 198 EKACQSIYPLHDV 210


>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence; n=3; core eudicotyledons|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 656

 Score =  269 bits (660), Expect = 3e-71
 Identities = 128/191 (67%), Positives = 154/191 (80%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           DPF +KDWYD+KAPS+F  R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D  +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
           ++RK RL AEDVQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FC
Sbjct: 475 AYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFC 534

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           I FT K     +KTCYAQ +Q+R IR+KM EI+T   TS +L+E+V K IP+SI ++IEK
Sbjct: 535 IAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEK 594

Query: 604 ACHGIYPLRDV 636
           A   IYPL++V
Sbjct: 595 ATSSIYPLQNV 605


>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
           n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 256

 Score =  233 bits (569), Expect = 3e-60
 Identities = 109/191 (57%), Positives = 144/191 (75%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           DPF RKDWY +KAP+ F  R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D   
Sbjct: 22  DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
           +FRK +L  ++VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F 
Sbjct: 80  AFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFA 139

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           I  T +     +KT YA  +Q+RAIR+KM EII R+ ++  L+++ NKLIP+ I ++IEK
Sbjct: 140 IAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEK 199

Query: 604 ACHGIYPLRDV 636
           A  GIYPL++V
Sbjct: 200 ATQGIYPLQNV 210


>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
           Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
           - Dictyostelium discoideum AX4
          Length = 273

 Score =  211 bits (516), Expect = 9e-54
 Identities = 106/179 (59%), Positives = 138/179 (77%), Gaps = 4/179 (2%)
 Frame = +1

Query: 61  VDPFTRKDWYDVKAPSMFTK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 228
           VDPFTRK+WY V+AP+ F K     +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++  
Sbjct: 16  VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73

Query: 229 SDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 408
            D  + FRK +L AE+V+GRNVL NF+GMDLT+DKLR ++ KW TLIE  +DVKTTDGY 
Sbjct: 74  DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYF 133

Query: 409 LRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSI 585
           LRVF I FT K    ++KT YA+ ++V+AIRKKM +I+T  V+S++L+ VV+ LI  S+
Sbjct: 134 LRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSL 192


>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
           Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
           protein - Tetrahymena thermophila SB210
          Length = 265

 Score =  188 bits (457), Expect = 1e-46
 Identities = 87/195 (44%), Positives = 131/195 (67%), Gaps = 3/195 (1%)
 Frame = +1

Query: 61  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240
           +DP +RK+WYD +AP  F+ +  G TLV ++ G +IASE +KGRV E +LADL+ D+  +
Sbjct: 23  IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
           +++RK +L+ ++V GRN   +F+G+D+T D+L  M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82  KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141

Query: 421 CIGFTNKDTL---SQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAK 591
            + FT K +    S   TCYA+ +QVRAIR+K+   IT +     + E    LI +   K
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTK 201

Query: 592 DIEKACHGIYPLRDV 636
            IEK    I+PL+++
Sbjct: 202 KIEKETKNIFPLQNI 216


>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
           Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
           protein S3a - Entamoeba histolytica HM-1:IMSS
          Length = 257

 Score =  183 bits (446), Expect = 3e-45
 Identities = 89/180 (49%), Positives = 125/180 (69%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237
           I +PF++K+WY+VK P  F +R VG  +VN+T GT+IASE LKGRV EV+LADL  +   
Sbjct: 22  IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKF 81

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417
                KF+   EDV G++ L  FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+
Sbjct: 82  GAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRI 139

Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597
           FCIGFT++ +   +KT YA+  Q++ IRK M  +IT++  S EL + V+ L   +  K +
Sbjct: 140 FCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199


>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
           whole genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_168,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 291

 Score =  179 bits (436), Expect = 5e-44
 Identities = 82/192 (42%), Positives = 129/192 (67%)
 Frame = +1

Query: 61  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240
           +DP  RK+W+++ AP  F     G T +N++ GT +A+E +KGRV E SLADLQ  SD +
Sbjct: 19  IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
            ++RK +LI +DV+G     +F+G+D T DK+  M+KK QTLIE  ++ ++ DGY+LR+F
Sbjct: 78  MAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIF 137

Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600
            I FT      QRKT YAQ +Q++ IRKK+ EI+ ++V+   + +++     +S+AK+I 
Sbjct: 138 VIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIG 197

Query: 601 KACHGIYPLRDV 636
           KA   I+PL+++
Sbjct: 198 KATRTIFPLQNI 209


>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
           Antigen - Leishmania major
          Length = 264

 Score =  178 bits (434), Expect = 8e-44
 Identities = 77/191 (40%), Positives = 127/191 (66%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           +   RK+WYDV AP+ F KRQ   T+ N+TQGT+IA++ L+GRVFE +LADL   +  E 
Sbjct: 23  ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
           ++RK R   ++VQGRN+L  FH M++TTDK+  +++KW T +E  ++VKT DGY +R+F 
Sbjct: 83  AYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFV 142

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           + FT      Q + CYA+   V+ +R ++ ++I R ++  +++E V+ L  + ++  + +
Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202

Query: 604 ACHGIYPLRDV 636
            C+ I PLR++
Sbjct: 203 RCNPILPLREL 213


>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
           Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
           Rattus norvegicus
          Length = 237

 Score =  169 bits (411), Expect = 5e-41
 Identities = 95/188 (50%), Positives = 123/188 (65%), Gaps = 1/188 (0%)
 Frame = +1

Query: 76  RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 255
           +KD YDVKA +MF  R +G T V R Q TK+ S GL G VFE SLA LQ D       RK
Sbjct: 12  KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVV---VRK 68

Query: 256 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF- 432
           F+LI ED++G+N L N +GMDLT DK    V KWQ ++EA+ DVKT D Y+L +FC+G+ 
Sbjct: 69  FKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYT 127

Query: 433 TNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACH 612
           TN  T   R+   AQ+ QV  I     +I+  D   ++L+EV+NKL+PD++ KD+EKAC 
Sbjct: 128 TNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQ 185

Query: 613 GIYPLRDV 636
            IYPL DV
Sbjct: 186 FIYPLHDV 193


>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
           asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
           (Asian tapeworm)
          Length = 183

 Score =  144 bits (348), Expect = 2e-33
 Identities = 69/127 (54%), Positives = 88/127 (69%)
 Frame = +1

Query: 247 FRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
           FRKF+L  EDVQGR+ L NFHGMDLT DKL  MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7   FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66

Query: 427 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKA 606
            FT K    Q+   YAQ T+++ +R ++ E++ R+V   +L+ VV KLIPDSI +D    
Sbjct: 67  AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125

Query: 607 CHGIYPL 627
              I+PL
Sbjct: 126 ASSIFPL 132


>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
           protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
           similar to ribosomal protein S3a isoform 5 - Homo
           sapiens
          Length = 211

 Score =  134 bits (325), Expect = 1e-30
 Identities = 69/114 (60%), Positives = 85/114 (74%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237
           +VDPF++KDWYDV AP+MF  R +G TLV RTQGTKIAS+   GRVFEVSLADLQ D   
Sbjct: 21  VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQND--- 74

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 399
           E +FRKF+LI EDVQG+N L NFHG+DLT+DK+   ++K    I    +V+T D
Sbjct: 75  EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127



 Score = 76.6 bits (180), Expect = 5e-13
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = +1

Query: 496 IRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 636
           IRKKM EI+TR+V +++L+EVVNKLIPDSI KD+EKAC  IYPL DV
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDV 157


>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
           ATCC 50803
          Length = 248

 Score =  125 bits (302), Expect = 8e-28
 Identities = 65/191 (34%), Positives = 104/191 (54%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           DP+ +K+WY V AP+ F  R +G T V +T G ++A++ +  RV+EV+L DL   ++   
Sbjct: 20  DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
              KF L  + V     L NFHGMD+T  K   + +K    I+  +D+ TTDGY+LRVF 
Sbjct: 80  GNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFV 139

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           I FT++    +RK C+ +   +R +R  + E +  ++    +  +V KL    +   + +
Sbjct: 140 IAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTE 199

Query: 604 ACHGIYPLRDV 636
           A   I   RDV
Sbjct: 200 ALQKITMCRDV 210


>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
           protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
           to ribosomal protein S3a - Equus caballus
          Length = 153

 Score =  119 bits (286), Expect = 7e-26
 Identities = 58/90 (64%), Positives = 69/90 (76%)
 Frame = +1

Query: 61  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240
           VD  ++KDWYD+KAP+MF  R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D   E
Sbjct: 22  VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND---E 78

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTD 330
            +FRKF+LI EDVQG+  L NF  M L+ D
Sbjct: 79  VAFRKFKLITEDVQGKRCLINFRSMGLSCD 108


>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
           Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
           putative - Trichomonas vaginalis G3
          Length = 247

 Score =  113 bits (273), Expect = 3e-24
 Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 2/193 (1%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFT-KRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD-SDA 237
           D F +K+W  V  P+ FT KR +G T+ N+    ++  + +  RV+E+S AD+  D S A
Sbjct: 18  DSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYVNNRVWELSHADMVNDLSHA 77

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417
            R F  +R IA    G  V   F GM LT DKL  +++K++T+I+A++D KT DG++LR+
Sbjct: 78  YRLF-SWRSIAA---GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRL 133

Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597
           F IGFT K   S +   YA   + R +R  M + +T    ++ + ++    + + I  +I
Sbjct: 134 FTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEI 193

Query: 598 EKACHGIYPLRDV 636
            + C  I  +  V
Sbjct: 194 VEKCKQICQIESV 206


>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
           Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
           - Encephalitozoon cuniculi
          Length = 189

 Score =  111 bits (268), Expect = 1e-23
 Identities = 55/149 (36%), Positives = 92/149 (61%)
 Frame = +1

Query: 187 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 366
           GR ++V+ ADL  ++D     RKF     D++G   +  F GM+LT+DK + M+KKW TL
Sbjct: 15  GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72

Query: 367 IEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSE 546
           IEA  D+   DG V RVF +G T +     +KTCY +H+  + IRK M ++I  +++  +
Sbjct: 73  IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132

Query: 547 LREVVNKLIPDSIAKDIEKACHGIYPLRD 633
           +++++ KL  +++ K IE+    I+PL++
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQN 161


>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
           theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
           (Cryptomonas phi)
          Length = 219

 Score =  108 bits (260), Expect = 1e-22
 Identities = 56/191 (29%), Positives = 103/191 (53%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           D  +R++   V AP +F  + +G TL+ +       +  +  ++++VSLAD+      E 
Sbjct: 19  DVNSRQELIKVYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKE--EF 75

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
           S   F   +  +        FHG+ LT DK+  ++KKW TLIE  ++ KT DGY L++F 
Sbjct: 76  SSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFL 135

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           I  + K    + KT Y   +Q RA+R+++ +II ++  + ++++ ++++    I + IE 
Sbjct: 136 IAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEI 195

Query: 604 ACHGIYPLRDV 636
            C  I+P+  V
Sbjct: 196 NCSKIFPIHQV 206


>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
           Euryarchaeota|Rep: 30S ribosomal protein S3AE -
           Uncultured methanogenic archaeon RC-I
          Length = 225

 Score = 90.6 bits (215), Expect = 3e-17
 Identities = 62/192 (32%), Positives = 98/192 (51%)
 Frame = +1

Query: 61  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240
           VD F  K+WY V AP+ F +  +G TL +   G  I      GRV E +L D+  D   +
Sbjct: 9   VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWTKQ 61

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
                FR+  E++ G +   +F G +LT D +R +VK+  + I+AN+ V T DG+ +RV 
Sbjct: 62  NIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVK 119

Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600
            I  T K          A+ +Q+ +IR+ M  ++ +        E +N+++   +A +I 
Sbjct: 120 PIVLTVK---------RARTSQIESIRQIMINVVNKRGAELGFTEFINEVVTGKVASEIY 170

Query: 601 KACHGIYPLRDV 636
           K    IYPLR V
Sbjct: 171 KNTKNIYPLRRV 182


>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
           Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 204

 Score = 80.2 bits (189), Expect = 4e-14
 Identities = 57/192 (29%), Positives = 100/192 (52%)
 Frame = +1

Query: 61  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240
           +D +  K+WY+++AP+   +  VGTT+             L GR  E ++ +L   +D  
Sbjct: 10  LDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELT--NDMT 60

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
           ++  K  L   +V G     +  G +LTTD +R +VK+  + I+AN+DV+T DG+V+RV 
Sbjct: 61  KNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVK 120

Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600
              FT K          A+ +Q++AIR+ M +I+ +  + ++    + + I   ++  I 
Sbjct: 121 PTCFTIK---------RARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIY 171

Query: 601 KACHGIYPLRDV 636
           +    IYPLR V
Sbjct: 172 RQAKFIYPLRRV 183


>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
           Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
           Methanopyrus kandleri
          Length = 211

 Score = 78.6 bits (185), Expect = 1e-13
 Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 4/193 (2%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           D +  K WY + AP MF   +VG T  +         E + GRV E +L D+  D     
Sbjct: 4   DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
               FR+   DV+G      F G  L  D +R +V++  + I+  IDV T DGY +RV  
Sbjct: 57  IKVFFRIY--DVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAG 114

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLI----PDSIAK 591
           + FT         T  A+ +Q RAIRK+M ++I  +    +  E + + +     +SI +
Sbjct: 115 LAFT---------TRRAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPE 165

Query: 592 DIEKACHGIYPLR 630
            I++A   IYP+R
Sbjct: 166 QIKEAGRKIYPIR 178


>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
           environmental samples|Rep: SSU ribosomal protein S3AE -
           uncultured euryarchaeote Alv-FOS1
          Length = 227

 Score = 75.8 bits (178), Expect = 8e-13
 Identities = 55/191 (28%), Positives = 91/191 (47%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           D +  K WY +  P  F+ +++G T  +     K+      GRV E +L DL  +     
Sbjct: 15  DKWRSKVWYTIITPETFSSKEIGMTPADDPD--KVI-----GRVAESTLYDLSGNFKKMH 67

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
               F++    VQG N    F G D+TTD +R M+++ ++ I+   +V+T+DGY +RV  
Sbjct: 68  VKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKV 125

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           +   ++   S  KT          IRKK+ E +T    +    E V  +I D   +++ K
Sbjct: 126 LTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSK 176

Query: 604 ACHGIYPLRDV 636
               IYP+R +
Sbjct: 177 ELKVIYPVRRI 187


>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
           Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
           Archaeoglobus fulgidus
          Length = 211

 Score = 73.7 bits (173), Expect = 3e-12
 Identities = 55/193 (28%), Positives = 91/193 (47%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237
           + D +T K W+ + AP  F   ++G T  +    +K+      GR  E +LA+L  D   
Sbjct: 10  VKDKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVV-----GRTVETTLAELTNDYSN 62

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417
           + +++K       V G N    F   +LT + L  + ++  + IE  +DV T DGY LRV
Sbjct: 63  QNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRV 122

Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597
             + F    T+ + KT     +Q RAIR  M +I+    +S    + + + +   +  +I
Sbjct: 123 KSVVF----TVRRCKT-----SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEI 173

Query: 598 EKACHGIYPLRDV 636
            K    IYP+R V
Sbjct: 174 YKNAKKIYPIRRV 186


>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
           Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
           pernix
          Length = 214

 Score = 71.7 bits (168), Expect = 1e-11
 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 4/197 (2%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237
           I D +  K W+ V AP +F +  +GTT  +         + L GRV E +L D+  D   
Sbjct: 6   IRDTWRLKKWFKVVAPPLFGETVLGTTPADDP-------DKLIGRVMETTLFDITGDYSY 58

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417
                 F+++   V+G      F G +L  D +R + ++  + +    +V T DGY LRV
Sbjct: 59  VHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRV 116

Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLI----PDSI 585
             + FT       R+ C  + +Q  AIRK M EI+ +    S L E++  ++      S+
Sbjct: 117 TAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSL 167

Query: 586 AKDIEKACHGIYPLRDV 636
           A  I+++   IYPLR V
Sbjct: 168 AYLIDESARKIYPLRKV 184


>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
           Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
           lacusprofundi ATCC 49239
          Length = 215

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 53/187 (28%), Positives = 85/187 (45%)
 Frame = +1

Query: 76  RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 255
           +K WY V AP  F ++++G TL           + + GR    +L +L  DS A  +   
Sbjct: 12  QKRWYSVLAPEQFDRQELGETLAEEP-------DQVVGRTITTTLGELTGDSGANNTKLT 64

Query: 256 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 435
           F++   DV        F   +LT D LR +V++  + +EA+I V TTD Y +RV  +  T
Sbjct: 65  FKIT--DVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT 122

Query: 436 NKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHG 615
            K          A  +Q +AIR+ M + +            V+ ++  +++  I      
Sbjct: 123 TKK---------ADRSQEKAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKL 173

Query: 616 IYPLRDV 636
           IYPLR V
Sbjct: 174 IYPLRRV 180


>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
           Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
           Pyrobaculum aerophilum
          Length = 221

 Score = 70.9 bits (166), Expect = 2e-11
 Identities = 54/191 (28%), Positives = 88/191 (46%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           DP+  K W+ V APS      +     N  Q        L  R  EVSL D+  D     
Sbjct: 20  DPWALKKWFSVYAPSYLGGVFLAEVPANEAQK-------LLMRTLEVSLYDITKDISHLP 72

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
              KF++    V+G   L  F G++LT D +R +V+K  + + A  +VKT DG V+R+  
Sbjct: 73  IKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAV 130

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           +G T     + +K+         A+RKKM E + +     +  + + +++  ++A D+  
Sbjct: 131 LGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFI 181

Query: 604 ACHGIYPLRDV 636
               I P+R V
Sbjct: 182 VAKKIAPMRKV 192


>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
           Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
           Haloarcula marismortui (Halobacterium marismortui)
          Length = 213

 Score = 66.5 bits (155), Expect = 5e-10
 Identities = 47/187 (25%), Positives = 85/187 (45%)
 Frame = +1

Query: 76  RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 255
           +K WY V+AP  F +  +G T            + + GR  E +L +L  D+    +   
Sbjct: 12  QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64

Query: 256 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 435
           F++   +V   +    F   +LT D LR +V++  + +EA I V TTD Y +++  +  T
Sbjct: 65  FKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT 122

Query: 436 NKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHG 615
            K          A  +Q +AIR+ M +++          ++++ ++   ++  I      
Sbjct: 123 TKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKD 173

Query: 616 IYPLRDV 636
           IYPLR V
Sbjct: 174 IYPLRRV 180


>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
           Methanococcales|Rep: 30S ribosomal protein S3Ae -
           Methanococcus maripaludis
          Length = 225

 Score = 65.7 bits (153), Expect = 9e-10
 Identities = 51/191 (26%), Positives = 83/191 (43%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           D +  K WYD+  P  F    +G T  N           L GR+ E+SL DL  +     
Sbjct: 17  DTWKSKVWYDIYTPQSFGGDVIGQTPANDPAN-------LIGRISEISLRDLTNEHSKHM 69

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
           +   F++  + V G N    F G D T + L+  V++ ++ I A ++V+T DG+ +RV  
Sbjct: 70  TRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKA 127

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           +  T        KT          IR +M +II      +   E V+ ++   +   I  
Sbjct: 128 LVLTAVRARDHHKT---------EIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYG 178

Query: 604 ACHGIYPLRDV 636
            C  ++PL+ V
Sbjct: 179 DCKKMFPLKRV 189


>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
           Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
           Methanoregula boonei (strain 6A8)
          Length = 201

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 50/192 (26%), Positives = 86/192 (44%)
 Frame = +1

Query: 61  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240
           V+ +  K W+ V  P    K  +G T+ +         E +KGR+ + +L ++  D   +
Sbjct: 11  VEGWKAKSWFKVYTPDNLGKAYIGDTIASEV-------ETVKGRIMQATLGEITNDYAKQ 63

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
                F+ IAE V G      F G ++T D LR +VK+  + I+ ++ V T D   +R+ 
Sbjct: 64  HIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRL- 120

Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600
                   T+S      A   Q  A+R  +   +     + +L  +VN ++   I+KD+ 
Sbjct: 121 --------TISCYTFARANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLF 172

Query: 601 KACHGIYPLRDV 636
           K    +YP R V
Sbjct: 173 KLVKTLYPTRRV 184


>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
           Methanocorpusculum labreanum Z|Rep: Ribosomal protein
           S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
           DSM 4855 / Z)
          Length = 206

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
 Frame = +1

Query: 61  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240
           V+ +  K+WY V AP    K+ +G  + +         E + GRV  VSL +L  D   +
Sbjct: 12  VEGWKAKNWYKVHAPEFLGKQFIGEIISSNP-------ENVPGRVLTVSLGELIQDYSKQ 64

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDG-YVLRV 417
                F+++  +V G      F+G ++T + +R MVKK  + +++ I V        L+V
Sbjct: 65  NVRASFKIM--NVAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTRELQV 122

Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597
               FT           +A+ +QV+ +R KM +++      ++    V+ ++   ++K +
Sbjct: 123 TITAFTIN---------HARLSQVQELRAKMVKVVEDSAKEADFESFVSAMLKGELSKKM 173

Query: 598 EKACHGIYPLRDV 636
              C  I+P+R +
Sbjct: 174 FAECKPIFPVRRI 186


>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
           Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
           S3Ae - Metallosphaera sedula DSM 5348
          Length = 216

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
 Frame = +1

Query: 22  SARXXXXXXXXXIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFE 201
           SAR         + D +  K W+ + +P +F +  +G+T       T        GR  E
Sbjct: 2   SARSGAKGSAGALKDKWKMKKWFSIYSPKVFGEVSLGSTPAFDVSQTM-------GRKVE 54

Query: 202 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 381
            +L DL  D         F+++  +  G  +   F G +L+ D +R +V++  + I   +
Sbjct: 55  TTLYDLTGDFSTVYVHLYFKVVRNE--GERLFTEFAGHELSRDYVRSLVRRKSSKINKVV 112

Query: 382 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTSSELREV 558
           D+ T DG+ LRV         TL+   T Y  H  Q   IRK M +++ +        E 
Sbjct: 113 DITTKDGFTLRV--------KTLA--LTAYRVHREQATTIRKIMEDVVKKTAEGKTFDEF 162

Query: 559 VNKLIPDSIAKDIEKACHGIYPLR 630
           V ++I  ++A +I      I PLR
Sbjct: 163 VQEMIFGNLANNIFNEAKKIAPLR 186


>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
           Methanobacteriaceae|Rep: Small subunit ribosomal protein
           S3Ae - Methanobrevibacter smithii (strain PS / ATCC
           35061 / DSM 861)
          Length = 193

 Score = 60.1 bits (139), Expect = 4e-08
 Identities = 45/191 (23%), Positives = 86/191 (45%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           D +  K WY +K P  F  +++G T            + L GR  EV++ +L  D    +
Sbjct: 12  DTWKEKSWYTIKTPVNFEDKEIGETPARDP-------DYLIGRGVEVTMRELSGDFS--K 62

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
            + K R   ++V G      F G   TTD +R M+++  + I+A+  VKT D   +++  
Sbjct: 63  QYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHV 122

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           +  T         T  A+ +Q + +R+ + +++          E++  ++   +A ++  
Sbjct: 123 LAVT---------TRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYH 173

Query: 604 ACHGIYPLRDV 636
               IYPL+ V
Sbjct: 174 NAKKIYPLKRV 184


>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
           marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
           - uncultured marine bacterium HF10_29C11
          Length = 322

 Score = 56.4 bits (130), Expect = 5e-07
 Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSM-FTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240
           D +  K WY ++AP   +  + +G T+         + E + GR++E++  +   D    
Sbjct: 21  DKWKTKRWYTIRAPRHPWNYQNIGETIGE-------SDEHIIGRIYEMTQQEFNGDFTKM 73

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
               +FR ++E V G++ L  F G    T+ +R  +++++  I+  IDV T DGY++R+ 
Sbjct: 74  HVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIK 131

Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600
            +  T K   +  K         ++IR K  +++   V  +    +   ++  S+  +I+
Sbjct: 132 PLIITQKRVQTSVK---------QSIRAKTRDVLLGYVAKTTYDALQVAMLDGSLETEIQ 182

Query: 601 KACHGIYPLRDV 636
                IYP R V
Sbjct: 183 NQIKTIYPCRSV 194


>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
           Thermoplasma|Rep: 30S ribosomal protein S3Ae -
           Thermoplasma volcanium
          Length = 215

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 48/191 (25%), Positives = 80/191 (41%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243
           + +  K WY V+AP     ++V   L          S  +  RV EV +++L  +     
Sbjct: 12  EKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGNFKKSN 64

Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
               FR+   + +G      F G  +  D +R +V++ +  I+   DVKT+D  ++ V  
Sbjct: 65  EKALFRIT--NCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKI 122

Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603
           +  T+    + +K           IRK + + I     S    E V  LI D I  D+  
Sbjct: 123 VVVTDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMIS 173

Query: 604 ACHGIYPLRDV 636
           A   IYPL+ +
Sbjct: 174 ATKDIYPLKKI 184


>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
           natans|Rep: Ribosomal protein S3a - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 215

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 39/185 (21%), Positives = 82/185 (44%)
 Frame = +1

Query: 79  KDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKF 258
           K+W  V AP +F  + +G  + N+        + +  R  EVSL++L   +D    ++  
Sbjct: 25  KEWKIVIAPKIFEYKIIGYIINNKYTNNSGRLKEISKRNLEVSLSELI--NDYSSYYKII 82

Query: 259 RLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTN 438
           +L    +    +   F+G  L+ D +  MV K   L+E +I + T    V+ +F + +T 
Sbjct: 83  KLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTI 141

Query: 439 KDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHGI 618
              L      Y + +++R I ++    I + + +  +  +      D I   I++    +
Sbjct: 142 TKNLHSNSITYGKRSRIRKINRESILCIKKMLENKPIDFIYKICCSDVIGNSIKRRSKRV 201

Query: 619 YPLRD 633
            P+++
Sbjct: 202 IPIKN 206


>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
           Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
           Picrophilus torridus
          Length = 209

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 1/192 (0%)
 Frame = +1

Query: 64  DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLK-GRVFEVSLADLQADSDAE 240
           D +  K WY + APS   +R++          +  A   L  GR  EV ++D   +    
Sbjct: 11  DKWKEKTWYTIVAPSFLGEREIAL--------SPAADPSLMIGRKVEVPVSDFTGNFRKS 62

Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
            +   FR+  ++  G+     F G  ++ D +R MV++ +  I+  +  KT DGY L V 
Sbjct: 63  STMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VI 119

Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600
            I   +   L+  K           +R K+   I     S  L E+   +I D++  DI 
Sbjct: 120 KIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIV 171

Query: 601 KACHGIYPLRDV 636
                +YP++ +
Sbjct: 172 DTLKDVYPIKKI 183


>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
           n=40; Coelomata|Rep: Uncharacterized protein
           ENSP00000341960 - Homo sapiens (Human)
          Length = 79

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 21/25 (84%), Positives = 21/25 (84%)
 Frame = +1

Query: 562 NKLIPDSIAKDIEKACHGIYPLRDV 636
           NKLIPDSI KDIEKAC  IYPL DV
Sbjct: 1   NKLIPDSIGKDIEKACQSIYPLHDV 25


>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
           Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
           symbiosum
          Length = 203

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 34/135 (25%), Positives = 62/135 (45%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237
           + D +  K W  + AP  F    V    V  T       +  KGRV EV+L D+      
Sbjct: 8   VKDKWRDKRWITIHAPDSFNS--VPAARVPITD-----DKHAKGRVIEVTLFDILKGDPQ 60

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417
           + +++ +  I + V   +    F   + + + LR +V++  + +   +DVKT+DGYV R+
Sbjct: 61  QNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRL 119

Query: 418 FCIGFTNKDTLSQRK 462
             +  T +   + +K
Sbjct: 120 KVLALTYRHLNTSKK 134


>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr5 scaffold_72, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 168

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 27/74 (36%), Positives = 43/74 (58%)
 Frame = -2

Query: 285 SLDILSDKSELAERPFRITISLEISKGDLKNTPL*TLRCNFCSLGAIDKGGAHLSLGEHG 106
           SL +L  +S+L      I I L IS+G+LK++ L   R +  S  + +KG A++S  E  
Sbjct: 61  SLHVLGSQSDLPVG--MILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDR 118

Query: 105 RRFNIVPVFTGERI 64
           RR N++PV   +R+
Sbjct: 119 RRLNVIPVLLSKRV 132


>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
           ribosomal protein S3a; v-fos transformation effector
           protein 1; n=2; Eutheria|Rep: Similar to ribosomal
           protein S3a; 40S ribosomal protein S3a; v-fos
           transformation effector protein 1 - Homo sapiens (Human)
          Length = 119

 Score = 41.1 bits (92), Expect = 0.022
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTT 138
           ++D F++KDWYDVKA +MF  R +G T
Sbjct: 21  VIDQFSKKDWYDVKALAMFNIRNIGKT 47


>UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2;
           Nanoarchaeum equitans|Rep: 30S ribosomal protein S3Ae -
           Nanoarchaeum equitans
          Length = 198

 Score = 36.7 bits (81), Expect = 0.47
 Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
 Frame = +1

Query: 76  RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 255
           RK W+ +KAP++F + ++G T   +        E + GR  E+++A L  ++   ++++ 
Sbjct: 12  RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMA-LVTNNYQLQNYKG 63

Query: 256 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 435
              I + V+G        G+ +    ++  V+  +  I  +  +K  D  ++RV  +  T
Sbjct: 64  IFKITK-VEGTTAKTELEGIKMYESIIQKWVEPGRDKITDSFVIKDKDNRLVRVKPVLIT 122

Query: 436 NKDTLSQRKTCYAQHTQVRAI-RKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACH 612
           N      R+    Q T +R I R    E+  +      + +++NK IP+ +   I+K   
Sbjct: 123 N------RRLHRKQGTAIRNIWRNYFVELGKKLSFEDMVMKILNKEIPEQLKIQIKK--- 173

Query: 613 GIYP 624
            IYP
Sbjct: 174 -IYP 176


>UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 628

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -3

Query: 422 QKTRRTYPSVVL--TSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRP 282
           QK RRTYP  +   T  + +IS  H  +     +  R +PW+L  TLRP
Sbjct: 505 QKERRTYPVQISLDTRQIPNISTRHIVSFVHWDAENRRVPWRLAETLRP 553


>UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4;
           Bacillus cereus group|Rep: Putative uncharacterized
           protein - Bacillus cereus (strain ATCC 14579 / DSM 31)
          Length = 151

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
 Frame = +1

Query: 226 DSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTD-KLRWMVKKWQ-------TLIEANI 381
           D   ER F+  ++I+ED++   +LC  +  D+ T+ KL +  K  +        LI  N 
Sbjct: 71  DVSPERMFQVLQIISEDIERIEMLCKEYEKDMPTEMKLIYDTKSGKFKAEYEYDLIHTND 130

Query: 382 DVKTTDGY 405
           D+KT D +
Sbjct: 131 DIKTADDF 138


>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 3702

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 27/106 (25%), Positives = 51/106 (48%)
 Frame = +1

Query: 280 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQR 459
           Q  ++ CN  G+D+  D+++  V +       +ID    D     VF  G    D L  R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567

Query: 460 KTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597
            + + + + +R++ K + +++    T   LR +VN  +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612


>UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65;
            Reoviridae|Rep: Minor core protein lambda-3 - Reovirus
            type 2 (strain D5/Jones) (T2J) (Mammalian orthoreovirus
            2)
          Length = 1267

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = +1

Query: 373  ANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELR 552
            + +DV   D  +LR+  +G   K   +Q      Q ++  A+  K   I+ +DV + +L 
Sbjct: 1117 SGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADALAGK---IMLQDVNTVQLA 1173

Query: 553  EVVNKLIPDS 582
             VVN  +PD+
Sbjct: 1174 RVVNLAVPDT 1183


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,759,578
Number of Sequences: 1657284
Number of extensions: 13679996
Number of successful extensions: 36158
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 34921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36119
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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