BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_K20 (637 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 320 2e-86 UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 295 4e-79 UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 269 3e-71 UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 233 3e-60 UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 211 9e-54 UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 188 1e-46 UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 183 3e-45 UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 179 5e-44 UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 178 8e-44 UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 169 5e-41 UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 144 2e-33 UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 134 1e-30 UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 125 8e-28 UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 119 7e-26 UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 113 3e-24 UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 111 1e-23 UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 108 1e-22 UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 91 3e-17 UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 80 4e-14 UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 79 1e-13 UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 76 8e-13 UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 74 3e-12 UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 72 1e-11 UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 71 2e-11 UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 71 2e-11 UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 66 5e-10 UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 66 9e-10 UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 62 1e-08 UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 62 1e-08 UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 62 1e-08 UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 60 4e-08 UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 56 5e-07 UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 52 1e-05 UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 52 2e-05 UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 51 2e-05 UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 48 1e-04 UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 47 4e-04 UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 44 0.002 UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 41 0.022 UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2; Nanoar... 37 0.47 UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides im... 33 4.4 UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4; ... 33 5.8 UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8 UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65; Reov... 33 7.6 >UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles gambiae (African malaria mosquito) Length = 269 Score = 320 bits (786), Expect = 2e-86 Identities = 148/193 (76%), Positives = 171/193 (88%) Frame = +1 Query: 58 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237 +VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80 Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417 ERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRV Sbjct: 81 ERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRV 140 Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597 FCIGFT KD++SQRKTCYAQH+Q++ IR KM II R++TS++L+ VV KL+PDSIAKDI Sbjct: 141 FCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDI 200 Query: 598 EKACHGIYPLRDV 636 EKAC +YPL DV Sbjct: 201 EKACQVVYPLHDV 213 >UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens (Human) Length = 264 Score = 295 bits (725), Expect = 4e-79 Identities = 140/193 (72%), Positives = 162/193 (83%) Frame = +1 Query: 58 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237 +VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77 Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417 E +FRKF+LI EDVQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+ Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137 Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597 FC+GFT K RKT YAQH QVR IRKKM EI+TR+V +++L+EVVNKLIPDSI KDI Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197 Query: 598 EKACHGIYPLRDV 636 EKAC IYPL DV Sbjct: 198 EKACQSIYPLHDV 210 >UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=3; core eudicotyledons|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 656 Score = 269 bits (660), Expect = 3e-71 Identities = 128/191 (67%), Positives = 154/191 (80%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D + Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 ++RK RL AEDVQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FC Sbjct: 475 AYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFC 534 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 I FT K +KTCYAQ +Q+R IR+KM EI+T TS +L+E+V K IP+SI ++IEK Sbjct: 535 IAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEK 594 Query: 604 ACHGIYPLRDV 636 A IYPL++V Sbjct: 595 ATSSIYPLQNV 605 >UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea) Length = 256 Score = 233 bits (569), Expect = 3e-60 Identities = 109/191 (57%), Positives = 144/191 (75%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 DPF RKDWY +KAP+ F R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 +FRK +L ++VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F Sbjct: 80 AFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFA 139 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 I T + +KT YA +Q+RAIR+KM EII R+ ++ L+++ NKLIP+ I ++IEK Sbjct: 140 IAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEK 199 Query: 604 ACHGIYPLRDV 636 A GIYPL++V Sbjct: 200 ATQGIYPLQNV 210 >UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyostelium discoideum|Rep: 40S ribosomal protein S3A - Dictyostelium discoideum AX4 Length = 273 Score = 211 bits (516), Expect = 9e-54 Identities = 106/179 (59%), Positives = 138/179 (77%), Gaps = 4/179 (2%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFTK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 228 VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++ Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73 Query: 229 SDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 408 D + FRK +L AE+V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY Sbjct: 74 DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYF 133 Query: 409 LRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSI 585 LRVF I FT K ++KT YA+ ++V+AIRKKM +I+T V+S++L+ VV+ LI S+ Sbjct: 134 LRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSL 192 >UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family protein - Tetrahymena thermophila SB210 Length = 265 Score = 188 bits (457), Expect = 1e-46 Identities = 87/195 (44%), Positives = 131/195 (67%), Gaps = 3/195 (1%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240 +DP +RK+WYD +AP F+ + G TLV ++ G +IASE +KGRV E +LADL+ D+ + Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420 +++RK +L+ ++V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141 Query: 421 CIGFTNKDTL---SQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAK 591 + FT K + S TCYA+ +QVRAIR+K+ IT + + E LI + K Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTK 201 Query: 592 DIEKACHGIYPLRDV 636 IEK I+PL+++ Sbjct: 202 KIEKETKNIFPLQNI 216 >UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal protein S3a - Entamoeba histolytica HM-1:IMSS Length = 257 Score = 183 bits (446), Expect = 3e-45 Identities = 89/180 (49%), Positives = 125/180 (69%) Frame = +1 Query: 58 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237 I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL + Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKF 81 Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417 KF+ EDV G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+ Sbjct: 82 GAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRI 139 Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597 FCIGFT++ + +KT YA+ Q++ IRK M +IT++ S EL + V+ L + K + Sbjct: 140 FCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199 >UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, whole genome shotgun sequence; n=4; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_168, whole genome shotgun sequence - Paramecium tetraurelia Length = 291 Score = 179 bits (436), Expect = 5e-44 Identities = 82/192 (42%), Positives = 129/192 (67%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240 +DP RK+W+++ AP F G T +N++ GT +A+E +KGRV E SLADLQ SD + Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420 ++RK +LI +DV+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F Sbjct: 78 MAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIF 137 Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600 I FT QRKT YAQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK+I Sbjct: 138 VIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIG 197 Query: 601 KACHGIYPLRDV 636 KA I+PL+++ Sbjct: 198 KATRTIFPLQNI 209 >UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: Antigen - Leishmania major Length = 264 Score = 178 bits (434), Expect = 8e-44 Identities = 77/191 (40%), Positives = 127/191 (66%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 + RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL + E Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 ++RK R ++VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F Sbjct: 83 AYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFV 142 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 + FT Q + CYA+ V+ +R ++ ++I R ++ +++E V+ L + ++ + + Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202 Query: 604 ACHGIYPLRDV 636 C+ I PLR++ Sbjct: 203 RCNPILPLREL 213 >UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1; Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry - Rattus norvegicus Length = 237 Score = 169 bits (411), Expect = 5e-41 Identities = 95/188 (50%), Positives = 123/188 (65%), Gaps = 1/188 (0%) Frame = +1 Query: 76 RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 255 +KD YDVKA +MF R +G T V R Q TK+ S GL G VFE SLA LQ D RK Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVV---VRK 68 Query: 256 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF- 432 F+LI ED++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+ Sbjct: 69 FKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYT 127 Query: 433 TNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACH 612 TN T R+ AQ+ QV I +I+ D ++L+EV+NKL+PD++ KD+EKAC Sbjct: 128 TNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQ 185 Query: 613 GIYPLRDV 636 IYPL DV Sbjct: 186 FIYPLHDV 193 >UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asiatica|Rep: Ribosomal protein S3a - Taenia asiatica (Asian tapeworm) Length = 183 Score = 144 bits (348), Expect = 2e-33 Identities = 69/127 (54%), Positives = 88/127 (69%) Frame = +1 Query: 247 FRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426 FRKF+L EDVQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66 Query: 427 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKA 606 FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125 Query: 607 CHGIYPL 627 I+PL Sbjct: 126 ASSIFPL 132 >UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED: similar to ribosomal protein S3a isoform 5 - Homo sapiens Length = 211 Score = 134 bits (325), Expect = 1e-30 Identities = 69/114 (60%), Positives = 85/114 (74%) Frame = +1 Query: 58 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237 +VDPF++KDWYDV AP+MF R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQND--- 74 Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 399 E +FRKF+LI EDVQG+N L NFHG+DLT+DK+ ++K I +V+T D Sbjct: 75 EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127 Score = 76.6 bits (180), Expect = 5e-13 Identities = 34/47 (72%), Positives = 41/47 (87%) Frame = +1 Query: 496 IRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 636 IRKKM EI+TR+V +++L+EVVNKLIPDSI KD+EKAC IYPL DV Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDV 157 >UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia ATCC 50803 Length = 248 Score = 125 bits (302), Expect = 8e-28 Identities = 65/191 (34%), Positives = 104/191 (54%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL ++ Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 KF L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF Sbjct: 80 GNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFV 139 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 I FT++ +RK C+ + +R +R + E + ++ + +V KL + + + Sbjct: 140 IAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTE 199 Query: 604 ACHGIYPLRDV 636 A I RDV Sbjct: 200 ALQKITMCRDV 210 >UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar to ribosomal protein S3a - Equus caballus Length = 153 Score = 119 bits (286), Expect = 7e-26 Identities = 58/90 (64%), Positives = 69/90 (76%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240 VD ++KDWYD+KAP+MF R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D E Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND---E 78 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTD 330 +FRKF+LI EDVQG+ L NF M L+ D Sbjct: 79 VAFRKFKLITEDVQGKRCLINFRSMGLSCD 108 >UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae, putative - Trichomonas vaginalis G3 Length = 247 Score = 113 bits (273), Expect = 3e-24 Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 2/193 (1%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFT-KRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD-SDA 237 D F +K+W V P+ FT KR +G T+ N+ ++ + + RV+E+S AD+ D S A Sbjct: 18 DSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYVNNRVWELSHADMVNDLSHA 77 Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417 R F +R IA G V F GM LT DKL +++K++T+I+A++D KT DG++LR+ Sbjct: 78 YRLF-SWRSIAA---GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRL 133 Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597 F IGFT K S + YA + R +R M + +T ++ + ++ + + I +I Sbjct: 134 FTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEI 193 Query: 598 EKACHGIYPLRDV 636 + C I + V Sbjct: 194 VEKCKQICQIESV 206 >UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A - Encephalitozoon cuniculi Length = 189 Score = 111 bits (268), Expect = 1e-23 Identities = 55/149 (36%), Positives = 92/149 (61%) Frame = +1 Query: 187 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 366 GR ++V+ ADL ++D RKF D++G + F GM+LT+DK + M+KKW TL Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72 Query: 367 IEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSE 546 IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ + Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132 Query: 547 LREVVNKLIPDSIAKDIEKACHGIYPLRD 633 +++++ KL +++ K IE+ I+PL++ Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQN 161 >UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia theta|Rep: 40S ribosomal Protein S3a - Guillardia theta (Cryptomonas phi) Length = 219 Score = 108 bits (260), Expect = 1e-22 Identities = 56/191 (29%), Positives = 103/191 (53%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 D +R++ V AP +F + +G TL+ + + + ++++VSLAD+ E Sbjct: 19 DVNSRQELIKVYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKE--EF 75 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 S F + + FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F Sbjct: 76 SSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFL 135 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 I + K + KT Y +Q RA+R+++ +II ++ + ++++ ++++ I + IE Sbjct: 136 IAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEI 195 Query: 604 ACHGIYPLRDV 636 C I+P+ V Sbjct: 196 NCSKIFPIHQV 206 >UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryarchaeota|Rep: 30S ribosomal protein S3AE - Uncultured methanogenic archaeon RC-I Length = 225 Score = 90.6 bits (215), Expect = 3e-17 Identities = 62/192 (32%), Positives = 98/192 (51%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240 VD F K+WY V AP+ F + +G TL + G I GRV E +L D+ D + Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWTKQ 61 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420 FR+ E++ G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV Sbjct: 62 NIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVK 119 Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600 I T K A+ +Q+ +IR+ M ++ + E +N+++ +A +I Sbjct: 120 PIVLTVK---------RARTSQIESIRQIMINVVNKRGAELGFTEFINEVVTGKVASEIY 170 Query: 601 KACHGIYPLRDV 636 K IYPLR V Sbjct: 171 KNTKNIYPLRRV 182 >UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryarchaeota|Rep: 30S ribosomal protein S3Ae - Methanosarcina mazei (Methanosarcina frisia) Length = 204 Score = 80.2 bits (189), Expect = 4e-14 Identities = 57/192 (29%), Positives = 100/192 (52%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240 +D + K+WY+++AP+ + VGTT+ L GR E ++ +L +D Sbjct: 10 LDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELT--NDMT 60 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420 ++ K L +V G + G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV Sbjct: 61 KNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVK 120 Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600 FT K A+ +Q++AIR+ M +I+ + + ++ + + I ++ I Sbjct: 121 PTCFTIK---------RARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIY 171 Query: 601 KACHGIYPLRDV 636 + IYPLR V Sbjct: 172 RQAKFIYPLRRV 183 >UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae - Methanopyrus kandleri Length = 211 Score = 78.6 bits (185), Expect = 1e-13 Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 4/193 (2%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 D + K WY + AP MF +VG T + E + GRV E +L D+ D Sbjct: 4 DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 FR+ DV+G F G L D +R +V++ + I+ IDV T DGY +RV Sbjct: 57 IKVFFRIY--DVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAG 114 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLI----PDSIAK 591 + FT T A+ +Q RAIRK+M ++I + + E + + + +SI + Sbjct: 115 LAFT---------TRRAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPE 165 Query: 592 DIEKACHGIYPLR 630 I++A IYP+R Sbjct: 166 QIKEAGRKIYPIR 178 >UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; environmental samples|Rep: SSU ribosomal protein S3AE - uncultured euryarchaeote Alv-FOS1 Length = 227 Score = 75.8 bits (178), Expect = 8e-13 Identities = 55/191 (28%), Positives = 91/191 (47%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 D + K WY + P F+ +++G T + K+ GRV E +L DL + Sbjct: 15 DKWRSKVWYTIITPETFSSKEIGMTPADDPD--KVI-----GRVAESTLYDLSGNFKKMH 67 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 F++ VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV Sbjct: 68 VKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKV 125 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 + ++ S KT IRKK+ E +T + E V +I D +++ K Sbjct: 126 LTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSK 176 Query: 604 ACHGIYPLRDV 636 IYP+R + Sbjct: 177 ELKVIYPVRRI 187 >UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae - Archaeoglobus fulgidus Length = 211 Score = 73.7 bits (173), Expect = 3e-12 Identities = 55/193 (28%), Positives = 91/193 (47%) Frame = +1 Query: 58 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237 + D +T K W+ + AP F ++G T + +K+ GR E +LA+L D Sbjct: 10 VKDKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVV-----GRTVETTLAELTNDYSN 62 Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417 + +++K V G N F +LT + L + ++ + IE +DV T DGY LRV Sbjct: 63 QNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRV 122 Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597 + F T+ + KT +Q RAIR M +I+ +S + + + + + +I Sbjct: 123 KSVVF----TVRRCKT-----SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEI 173 Query: 598 EKACHGIYPLRDV 636 K IYP+R V Sbjct: 174 YKNAKKIYPIRRV 186 >UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum pernix Length = 214 Score = 71.7 bits (168), Expect = 1e-11 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 4/197 (2%) Frame = +1 Query: 58 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237 I D + K W+ V AP +F + +GTT + + L GRV E +L D+ D Sbjct: 6 IRDTWRLKKWFKVVAPPLFGETVLGTTPADDP-------DKLIGRVMETTLFDITGDYSY 58 Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417 F+++ V+G F G +L D +R + ++ + + +V T DGY LRV Sbjct: 59 VHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRV 116 Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLI----PDSI 585 + FT R+ C + +Q AIRK M EI+ + S L E++ ++ S+ Sbjct: 117 TAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSL 167 Query: 586 AKDIEKACHGIYPLRDV 636 A I+++ IYPLR V Sbjct: 168 AYLIDESARKIYPLRKV 184 >UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum lacusprofundi ATCC 49239 Length = 215 Score = 71.3 bits (167), Expect = 2e-11 Identities = 53/187 (28%), Positives = 85/187 (45%) Frame = +1 Query: 76 RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 255 +K WY V AP F ++++G TL + + GR +L +L DS A + Sbjct: 12 QKRWYSVLAPEQFDRQELGETLAEEP-------DQVVGRTITTTLGELTGDSGANNTKLT 64 Query: 256 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 435 F++ DV F +LT D LR +V++ + +EA+I V TTD Y +RV + T Sbjct: 65 FKIT--DVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT 122 Query: 436 NKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHG 615 K A +Q +AIR+ M + + V+ ++ +++ I Sbjct: 123 TKK---------ADRSQEKAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKL 173 Query: 616 IYPLRDV 636 IYPLR V Sbjct: 174 IYPLRRV 180 >UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyrobaculum|Rep: 30S ribosomal protein S3Ae - Pyrobaculum aerophilum Length = 221 Score = 70.9 bits (166), Expect = 2e-11 Identities = 54/191 (28%), Positives = 88/191 (46%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 DP+ K W+ V APS + N Q L R EVSL D+ D Sbjct: 20 DPWALKKWFSVYAPSYLGGVFLAEVPANEAQK-------LLMRTLEVSLYDITKDISHLP 72 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 KF++ V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ Sbjct: 73 IKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAV 130 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 +G T + +K+ A+RKKM E + + + + + +++ ++A D+ Sbjct: 131 LGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFI 181 Query: 604 ACHGIYPLRDV 636 I P+R V Sbjct: 182 VAKKIAPMRKV 192 >UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Halobacteriaceae|Rep: 30S ribosomal protein S3Ae - Haloarcula marismortui (Halobacterium marismortui) Length = 213 Score = 66.5 bits (155), Expect = 5e-10 Identities = 47/187 (25%), Positives = 85/187 (45%) Frame = +1 Query: 76 RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 255 +K WY V+AP F + +G T + + GR E +L +L D+ + Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64 Query: 256 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 435 F++ +V + F +LT D LR +V++ + +EA I V TTD Y +++ + T Sbjct: 65 FKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT 122 Query: 436 NKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHG 615 K A +Q +AIR+ M +++ ++++ ++ ++ I Sbjct: 123 TKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKD 173 Query: 616 IYPLRDV 636 IYPLR V Sbjct: 174 IYPLRRV 180 >UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methanococcales|Rep: 30S ribosomal protein S3Ae - Methanococcus maripaludis Length = 225 Score = 65.7 bits (153), Expect = 9e-10 Identities = 51/191 (26%), Positives = 83/191 (43%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 D + K WYD+ P F +G T N L GR+ E+SL DL + Sbjct: 17 DTWKSKVWYDIYTPQSFGGDVIGQTPANDPAN-------LIGRISEISLRDLTNEHSKHM 69 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 + F++ + V G N F G D T + L+ V++ ++ I A ++V+T DG+ +RV Sbjct: 70 TRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKA 127 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 + T KT IR +M +II + E V+ ++ + I Sbjct: 128 LVLTAVRARDHHKT---------EIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYG 178 Query: 604 ACHGIYPLRDV 636 C ++PL+ V Sbjct: 179 DCKKMFPLKRV 189 >UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae - Methanoregula boonei (strain 6A8) Length = 201 Score = 62.1 bits (144), Expect = 1e-08 Identities = 50/192 (26%), Positives = 86/192 (44%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240 V+ + K W+ V P K +G T+ + E +KGR+ + +L ++ D + Sbjct: 11 VEGWKAKSWFKVYTPDNLGKAYIGDTIASEV-------ETVKGRIMQATLGEITNDYAKQ 63 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420 F+ IAE V G F G ++T D LR +VK+ + I+ ++ V T D +R+ Sbjct: 64 HIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRL- 120 Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600 T+S A Q A+R + + + +L +VN ++ I+KD+ Sbjct: 121 --------TISCYTFARANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLF 172 Query: 601 KACHGIYPLRDV 636 K +YP R V Sbjct: 173 KLVKTLYPTRRV 184 >UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal protein S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) Length = 206 Score = 62.1 bits (144), Expect = 1e-08 Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 1/193 (0%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240 V+ + K+WY V AP K+ +G + + E + GRV VSL +L D + Sbjct: 12 VEGWKAKNWYKVHAPEFLGKQFIGEIISSNP-------ENVPGRVLTVSLGELIQDYSKQ 64 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDG-YVLRV 417 F+++ +V G F+G ++T + +R MVKK + +++ I V L+V Sbjct: 65 NVRASFKIM--NVAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTRELQV 122 Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597 FT +A+ +QV+ +R KM +++ ++ V+ ++ ++K + Sbjct: 123 TITAFTIN---------HARLSQVQELRAKMVKVVEDSAKEADFESFVSAMLKGELSKKM 173 Query: 598 EKACHGIYPLRDV 636 C I+P+R + Sbjct: 174 FAECKPIFPVRRI 186 >UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosphaera sedula DSM 5348|Rep: Ribosomal protein S3Ae - Metallosphaera sedula DSM 5348 Length = 216 Score = 61.7 bits (143), Expect = 1e-08 Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 1/204 (0%) Frame = +1 Query: 22 SARXXXXXXXXXIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFE 201 SAR + D + K W+ + +P +F + +G+T T GR E Sbjct: 2 SARSGAKGSAGALKDKWKMKKWFSIYSPKVFGEVSLGSTPAFDVSQTM-------GRKVE 54 Query: 202 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 381 +L DL D F+++ + G + F G +L+ D +R +V++ + I + Sbjct: 55 TTLYDLTGDFSTVYVHLYFKVVRNE--GERLFTEFAGHELSRDYVRSLVRRKSSKINKVV 112 Query: 382 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTSSELREV 558 D+ T DG+ LRV TL+ T Y H Q IRK M +++ + E Sbjct: 113 DITTKDGFTLRV--------KTLA--LTAYRVHREQATTIRKIMEDVVKKTAEGKTFDEF 162 Query: 559 VNKLIPDSIAKDIEKACHGIYPLR 630 V ++I ++A +I I PLR Sbjct: 163 VQEMIFGNLANNIFNEAKKIAPLR 186 >UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2; Methanobacteriaceae|Rep: Small subunit ribosomal protein S3Ae - Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) Length = 193 Score = 60.1 bits (139), Expect = 4e-08 Identities = 45/191 (23%), Positives = 86/191 (45%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 D + K WY +K P F +++G T + L GR EV++ +L D + Sbjct: 12 DTWKEKSWYTIKTPVNFEDKEIGETPARDP-------DYLIGRGVEVTMRELSGDFS--K 62 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 + K R ++V G F G TTD +R M+++ + I+A+ VKT D +++ Sbjct: 63 QYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHV 122 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 + T T A+ +Q + +R+ + +++ E++ ++ +A ++ Sbjct: 123 LAVT---------TRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYH 173 Query: 604 ACHGIYPLRDV 636 IYPL+ V Sbjct: 174 NAKKIYPLKRV 184 >UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE - uncultured marine bacterium HF10_29C11 Length = 322 Score = 56.4 bits (130), Expect = 5e-07 Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 1/192 (0%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSM-FTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 240 D + K WY ++AP + + +G T+ + E + GR++E++ + D Sbjct: 21 DKWKTKRWYTIRAPRHPWNYQNIGETIGE-------SDEHIIGRIYEMTQQEFNGDFTKM 73 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420 +FR ++E V G++ L F G T+ +R +++++ I+ IDV T DGY++R+ Sbjct: 74 HVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIK 131 Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600 + T K + K ++IR K +++ V + + ++ S+ +I+ Sbjct: 132 PLIITQKRVQTSVK---------QSIRAKTRDVLLGYVAKTTYDALQVAMLDGSLETEIQ 182 Query: 601 KACHGIYPLRDV 636 IYP R V Sbjct: 183 NQIKTIYPCRSV 194 >UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermoplasma|Rep: 30S ribosomal protein S3Ae - Thermoplasma volcanium Length = 215 Score = 52.0 bits (119), Expect = 1e-05 Identities = 48/191 (25%), Positives = 80/191 (41%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 243 + + K WY V+AP ++V L S + RV EV +++L + Sbjct: 12 EKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGNFKKSN 64 Query: 244 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423 FR+ + +G F G + D +R +V++ + I+ DVKT+D ++ V Sbjct: 65 EKALFRIT--NCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKI 122 Query: 424 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 603 + T+ + +K IRK + + I S E V LI D I D+ Sbjct: 123 VVVTDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMIS 173 Query: 604 ACHGIYPLRDV 636 A IYPL+ + Sbjct: 174 ATKDIYPLKKI 184 >UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella natans|Rep: Ribosomal protein S3a - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 215 Score = 51.6 bits (118), Expect = 2e-05 Identities = 39/185 (21%), Positives = 82/185 (44%) Frame = +1 Query: 79 KDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKF 258 K+W V AP +F + +G + N+ + + R EVSL++L +D ++ Sbjct: 25 KEWKIVIAPKIFEYKIIGYIINNKYTNNSGRLKEISKRNLEVSLSELI--NDYSSYYKII 82 Query: 259 RLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTN 438 +L + + F+G L+ D + MV K L+E +I + T V+ +F + +T Sbjct: 83 KLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTI 141 Query: 439 KDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHGI 618 L Y + +++R I ++ I + + + + + D I I++ + Sbjct: 142 TKNLHSNSITYGKRSRIRKINRESILCIKKMLENKPIDFIYKICCSDVIGNSIKRRSKRV 201 Query: 619 YPLRD 633 P+++ Sbjct: 202 IPIKN 206 >UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermoplasmatales|Rep: 30S ribosomal protein S3Ae - Picrophilus torridus Length = 209 Score = 51.2 bits (117), Expect = 2e-05 Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Frame = +1 Query: 64 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLK-GRVFEVSLADLQADSDAE 240 D + K WY + APS +R++ + A L GR EV ++D + Sbjct: 11 DKWKEKTWYTIVAPSFLGEREIAL--------SPAADPSLMIGRKVEVPVSDFTGNFRKS 62 Query: 241 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420 + FR+ ++ G+ F G ++ D +R MV++ + I+ + KT DGY L V Sbjct: 63 STMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VI 119 Query: 421 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIE 600 I + L+ K +R K+ I S L E+ +I D++ DI Sbjct: 120 KIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIV 171 Query: 601 KACHGIYPLRDV 636 +YP++ + Sbjct: 172 DTLKDVYPIKKI 183 >UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960; n=40; Coelomata|Rep: Uncharacterized protein ENSP00000341960 - Homo sapiens (Human) Length = 79 Score = 48.4 bits (110), Expect = 1e-04 Identities = 21/25 (84%), Positives = 21/25 (84%) Frame = +1 Query: 562 NKLIPDSIAKDIEKACHGIYPLRDV 636 NKLIPDSI KDIEKAC IYPL DV Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDV 25 >UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum symbiosum Length = 203 Score = 46.8 bits (106), Expect = 4e-04 Identities = 34/135 (25%), Positives = 62/135 (45%) Frame = +1 Query: 58 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237 + D + K W + AP F V V T + KGRV EV+L D+ Sbjct: 8 VKDKWRDKRWITIHAPDSFNS--VPAARVPITD-----DKHAKGRVIEVTLFDILKGDPQ 60 Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417 + +++ + I + V + F + + + LR +V++ + + +DVKT+DGYV R+ Sbjct: 61 QNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRL 119 Query: 418 FCIGFTNKDTLSQRK 462 + T + + +K Sbjct: 120 KVLALTYRHLNTSKK 134 >UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 168 Score = 44.4 bits (100), Expect = 0.002 Identities = 27/74 (36%), Positives = 43/74 (58%) Frame = -2 Query: 285 SLDILSDKSELAERPFRITISLEISKGDLKNTPL*TLRCNFCSLGAIDKGGAHLSLGEHG 106 SL +L +S+L I I L IS+G+LK++ L R + S + +KG A++S E Sbjct: 61 SLHVLGSQSDLPVG--MILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDR 118 Query: 105 RRFNIVPVFTGERI 64 RR N++PV +R+ Sbjct: 119 RRLNVIPVLLSKRV 132 >UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S ribosomal protein S3a; v-fos transformation effector protein 1; n=2; Eutheria|Rep: Similar to ribosomal protein S3a; 40S ribosomal protein S3a; v-fos transformation effector protein 1 - Homo sapiens (Human) Length = 119 Score = 41.1 bits (92), Expect = 0.022 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = +1 Query: 58 IVDPFTRKDWYDVKAPSMFTKRQVGTT 138 ++D F++KDWYDVKA +MF R +G T Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47 >UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2; Nanoarchaeum equitans|Rep: 30S ribosomal protein S3Ae - Nanoarchaeum equitans Length = 198 Score = 36.7 bits (81), Expect = 0.47 Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 1/184 (0%) Frame = +1 Query: 76 RKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRK 255 RK W+ +KAP++F + ++G T + E + GR E+++A L ++ ++++ Sbjct: 12 RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMA-LVTNNYQLQNYKG 63 Query: 256 FRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 435 I + V+G G+ + ++ V+ + I + +K D ++RV + T Sbjct: 64 IFKITK-VEGTTAKTELEGIKMYESIIQKWVEPGRDKITDSFVIKDKDNRLVRVKPVLIT 122 Query: 436 NKDTLSQRKTCYAQHTQVRAI-RKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACH 612 N R+ Q T +R I R E+ + + +++NK IP+ + I+K Sbjct: 123 N------RRLHRKQGTAIRNIWRNYFVELGKKLSFEDMVMKILNKEIPEQLKIQIKK--- 173 Query: 613 GIYP 624 IYP Sbjct: 174 -IYP 176 >UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides immitis|Rep: Predicted protein - Coccidioides immitis Length = 628 Score = 33.5 bits (73), Expect = 4.4 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -3 Query: 422 QKTRRTYPSVVL--TSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRP 282 QK RRTYP + T + +IS H + + R +PW+L TLRP Sbjct: 505 QKERRTYPVQISLDTRQIPNISTRHIVSFVHWDAENRRVPWRLAETLRP 553 >UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4; Bacillus cereus group|Rep: Putative uncharacterized protein - Bacillus cereus (strain ATCC 14579 / DSM 31) Length = 151 Score = 33.1 bits (72), Expect = 5.8 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%) Frame = +1 Query: 226 DSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTD-KLRWMVKKWQ-------TLIEANI 381 D ER F+ ++I+ED++ +LC + D+ T+ KL + K + LI N Sbjct: 71 DVSPERMFQVLQIISEDIERIEMLCKEYEKDMPTEMKLIYDTKSGKFKAEYEYDLIHTND 130 Query: 382 DVKTTDGY 405 D+KT D + Sbjct: 131 DIKTADDF 138 >UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; Ustilago maydis|Rep: Putative uncharacterized protein - Ustilago maydis (Smut fungus) Length = 3702 Score = 33.1 bits (72), Expect = 5.8 Identities = 27/106 (25%), Positives = 51/106 (48%) Frame = +1 Query: 280 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQR 459 Q ++ CN G+D+ D+++ V + +ID D VF G D L R Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567 Query: 460 KTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597 + + + + +R++ K + +++ T LR +VN +PDS+ + I Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612 >UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65; Reoviridae|Rep: Minor core protein lambda-3 - Reovirus type 2 (strain D5/Jones) (T2J) (Mammalian orthoreovirus 2) Length = 1267 Score = 32.7 bits (71), Expect = 7.6 Identities = 20/70 (28%), Positives = 35/70 (50%) Frame = +1 Query: 373 ANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELR 552 + +DV D +LR+ +G K +Q Q ++ A+ K I+ +DV + +L Sbjct: 1117 SGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADALAGK---IMLQDVNTVQLA 1173 Query: 553 EVVNKLIPDS 582 VVN +PD+ Sbjct: 1174 RVVNLAVPDT 1183 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 662,759,578 Number of Sequences: 1657284 Number of extensions: 13679996 Number of successful extensions: 36158 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 34921 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 36119 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 47296372782 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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