Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K20
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   316   5e-88
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           31   0.031
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        31   0.031
DQ080895-1|AAY89541.1|  120|Anopheles gambiae olfactory receptor...    23   8.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.1  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  316 bits (775), Expect = 5e-88
 Identities = 146/193 (75%), Positives = 169/193 (87%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 237
           +VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80

Query: 238 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 417
           ERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LRV
Sbjct: 81  ERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRV 140

Query: 418 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 597
           FCIGFT KD++SQRKTCYAQH+Q++ IR KM  II R++TS++L+ VV KL+PDSIAKDI
Sbjct: 141 FCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDI 200

Query: 598 EKACHGIYPLRDV 636
           EKAC  +YPL DV
Sbjct: 201 EKACQVVYPLHDV 213


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 31.1 bits (67), Expect = 0.031
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 202 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 363
           V+LA+L A SD             D+QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 31.1 bits (67), Expect = 0.031
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 202 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 363
           V+LA+L A SD             D+QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>DQ080895-1|AAY89541.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 428 PMQKTRRTYPSVVLTSMLASISVC 357
           P ++TRR Y  V++   L ++++C
Sbjct: 37  PDRRTRRWYVKVLIAVNLITLAIC 60


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 116  PRDKWAPPLSIAPRE 160
            P D W PP    P+E
Sbjct: 1746 PHDNWLPPCYYVPKE 1760


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,822
Number of Sequences: 2352
Number of extensions: 14333
Number of successful extensions: 65
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)