Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K19
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical... 158 2e-39
AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical... 46 1e-05
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 40 7e-04
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 40 7e-04
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 33 0.078
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 33 0.078
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 32 0.24
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.55
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 31 0.55
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.55
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 0.55
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 30 0.96
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 30 0.96
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 30 0.96
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 30 0.96
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 30 0.96
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 29 1.3
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 29 1.3
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 29 1.3
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 29 1.7
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 29 1.7
Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 28 2.9
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 28 2.9
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z82092-1|CAB05010.1| 196|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z47070-6|CAM84806.1| 212|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 27 5.1
Z46828-4|CAA86859.1| 207|Caenorhabditis elegans Hypothetical pr... 27 6.8
U55364-13|AAM29677.1| 250|Caenorhabditis elegans Hypothetical p... 27 6.8
U55364-12|AAA97977.2| 260|Caenorhabditis elegans Hypothetical p... 27 6.8
AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical ... 27 6.8
Z50027-7|CAA90332.3| 460|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z50027-6|CAO82026.1| 564|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A2AL.13 protein.
Length = 168
Score = 158 bits (384), Expect = 2e-39
Identities = 83/163 (50%), Positives = 109/163 (66%), Gaps = 15/163 (9%)
Frame = +2
Query: 26 NDAPLPDGWEMRTSRSTGMSYYLNTYTKKSQWERPEAPA-----ELTEIRCSHILVKHVQ 190
+D LP GWE R SRS YY NT T +SQWERP+ A EL ++C H+LVKH
Sbjct: 2 SDNSLPAGWEKRQSRSNDRVYYFNTATGRSQWERPDESAFGKGSELKSVQCLHLLVKHDG 61
Query: 191 SRRPSSWREDNITRSKEEALEILKK-------YRKQIV-ANDIT--FVDIATKYSDCSSA 340
SR PSSWR D+ITRSK++A+ ILK Y K++ A++I F ++A ++SDCSSA
Sbjct: 62 SRNPSSWRSDHITRSKDDAINILKSADLRNFHYEKELKDASNIEGKFRELAKQFSDCSSA 121
Query: 341 KRGGDLGMFGKGQMQKAFEEEAFTLPIGQLSKPIETDSGYHII 469
KRGGDLG F + QMQK FE+ +F L IG++S ++T SG H+I
Sbjct: 122 KRGGDLGPFERRQMQKPFEDASFALEIGEMSDIVDTSSGVHLI 164
>AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical
protein Y48C3A.16 protein.
Length = 126
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = +2
Query: 242 EALEILKKYRKQIVANDITFVDIATKYSDCSSAKRGGDLGMFGKGQMQKAFEEEAFTLPI 421
+ALE ++K + + + F ++A +YS+ A+ GGDLG +G M F++ AF L
Sbjct: 45 KALEAIEKLK-----SGMKFNEVAAQYSE-DKARSGGDLGWMTRGSMVGPFQDAAFALSN 98
Query: 422 GQLSKPIETDS------GYHII 469
KPI TD GYH+I
Sbjct: 99 SSCDKPIYTDPPVKTKFGYHVI 120
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 38 LPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
LPDGWEMR + G YY++ TK + WERP
Sbjct: 221 LPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 35 PLPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
PLP+GWE R +T Y++N + +QWE P
Sbjct: 325 PLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 35 PLPDGWEMRTSRSTGMSYYLNTYTKKSQWERPEA 136
PLP GWEMR G YY++ T+ + W+RP A
Sbjct: 254 PLPQGWEMRRD-PRGRVYYVDHNTRTTTWQRPTA 286
Score = 35.1 bits (77), Expect = 0.026
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 5 EARMSNENDAPLPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
+ R +D PLPDGWEMR + G+ ++++ +K + + P
Sbjct: 355 DPRTQGGSDQPLPDGWEMRFTEQ-GVPFFIDHQSKTTTYNDP 395
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 38 LPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
LPDGWEMR + G YY++ TK + WERP
Sbjct: 221 LPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 35 PLPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
PLP+GWE R +T Y++N + +QWE P
Sbjct: 325 PLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 35 PLPDGWEMRTSRSTGMSYYLNTYTKKSQWERPEA 136
PLP GWEMR G YY++ T+ + W+RP A
Sbjct: 254 PLPQGWEMRRD-PRGRVYYVDHNTRTTTWQRPTA 286
Score = 33.9 bits (74), Expect = 0.059
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 26 NDAPLPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
+D PLPDGWEMR + G+ ++++ +K + + P
Sbjct: 364 SDQPLPDGWEMRFTEQ-GVPFFIDHQSKTTTYNDP 397
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 33.5 bits (73), Expect = 0.078
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 47 GWEMRTSRSTGMSYYLNTYTKKSQWERP-EAPAE 145
GW + S S+G YY N T+ SQW++P E PAE
Sbjct: 10 GWTEQMS-SSGKMYYYNKKTEISQWDKPAEWPAE 42
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 33.5 bits (73), Expect = 0.078
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 23 ENDAPLPDGWEMRTSRSTGMSYYLNTYTKKSQWERPEAPAELTEI 157
E++ LPDGW+M+ + G +++++ TK + W P P T +
Sbjct: 267 EDELRLPDGWDMQVA-PNGRTFFIDHRTKTTTWTDPR-PGAATRV 309
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 77 GMSYYLNTYTKKSQWERPEAPAELTE 154
G YY NT TKK+QW +P+ E+T+
Sbjct: 137 GKPYYYNTLTKKTQWVKPDG-EEITK 161
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 50 WEMRTSRSTGMSYYLNTYTKKSQWERPE 133
W + T+ G YY N TK++ W +P+
Sbjct: 84 WSVHTNEK-GTPYYHNRVTKQTSWIKPD 110
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 0.55
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 50 WEMRTSRSTGMSYYLNTYTKKSQWERP 130
W+ S+S + YY+ ++K+QWE P
Sbjct: 3053 WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 0.55
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 50 WEMRTSRSTGMSYYLNTYTKKSQWERP 130
W+ S+S + YY+ ++K+QWE P
Sbjct: 3053 WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 30.7 bits (66), Expect = 0.55
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 5 EARMSNENDAPLPDGWEMRTSRSTGMSYYLNTYTKKSQWERPEA 136
E RM + PD + G YY N+ T+++ WE+P+A
Sbjct: 219 EERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQENTWEKPKA 262
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 30.7 bits (66), Expect = 0.55
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 5 EARMSNENDAPLPDGWEMRTSRSTGMSYYLNTYTKKSQWERPEA 136
E RM + PD + G YY N+ T+++ WE+P+A
Sbjct: 210 EERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQENTWEKPKA 253
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 30.7 bits (66), Expect = 0.55
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 50 WEMRTSRSTGMSYYLNTYTKKSQWERP 130
W+ S+S + YY+ ++K+QWE P
Sbjct: 3053 WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 29.9 bits (64), Expect = 0.96
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 35 PLPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
P+P GWEM S G+ Y+ + +K + W+ P
Sbjct: 204 PMPQGWEM-CYDSDGVRYFKDHNSKTTTWDDP 234
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 29.9 bits (64), Expect = 0.96
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 50 WEMRTSRSTGMSYYLNTYTKKSQWERPEAPAELTEIRC 163
W + S + G +YY N TK++QW P L E C
Sbjct: 1352 WAIAKSEA-GETYYYNKITKETQWTAPTPVQGLLEPAC 1388
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 29.9 bits (64), Expect = 0.96
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 50 WEMRTSRSTGMSYYLNTYTKKSQWERPEAPAELTEIRC 163
W + S + G +YY N TK++QW P L E C
Sbjct: 1366 WAIAKSEA-GETYYYNKITKETQWTAPTPVQGLLEPAC 1402
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 44 DGWEMRTSRSTGMSYYLNTYTKKSQWERPEA 136
D W + G YY N+ T+++ WE+P+A
Sbjct: 12 DAWN-EFNAPDGRKYYFNSITQENTWEKPKA 41
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 44 DGWEMRTSRSTGMSYYLNTYTKKSQWERPEA 136
D W + G YY N+ T+++ WE+P+A
Sbjct: 12 DAWN-EFNAPDGRKYYFNSITQENTWEKPKA 41
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 152 EIRC-SHILVKHVQSR---RPSSWREDNITRSKEEALEILKKYRKQIVANDITFVDIATK 319
EIR S V H R + WR N+ E +++LK ++ ++ + + DIA
Sbjct: 577 EIRSRSDFAVVHYAGRVDYQSEGWRVKNMDPLNENVIDVLKTSKESLIVD--MWKDIADV 634
Query: 320 YSDCSSAKRGGDLGMFGKGQMQKAFEEEAFTLPIGQLSKPIET 448
S S+A D G+FG +K L QL++ + T
Sbjct: 635 CS-LSAADSTSDTGVFGSRVPKKGMFRTVSQLYKEQLARLMST 676
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 152 EIRC-SHILVKHVQSR---RPSSWREDNITRSKEEALEILKKYRKQIVANDITFVDIATK 319
EIR S V H R + WR N+ E +++LK ++ ++ + + DIA
Sbjct: 577 EIRSRSDFAVVHYAGRVDYQSEGWRVKNMDPLNENVIDVLKTSKESLIVD--MWKDIADV 634
Query: 320 YSDCSSAKRGGDLGMFGKGQMQKAFEEEAFTLPIGQLSKPIET 448
S S+A D G+FG +K L QL++ + T
Sbjct: 635 CS-LSAADSTSDTGVFGSRVPKKGMFRTVSQLYKEQLARLMST 676
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 152 EIRC-SHILVKHVQSR---RPSSWREDNITRSKEEALEILKKYRKQIVANDITFVDIATK 319
EIR S V H R + WR N+ E +++LK ++ ++ + + DIA
Sbjct: 577 EIRSRSDFAVVHYAGRVDYQSEGWRVKNMDPLNENVIDVLKTSKESLIVD--MWKDIADV 634
Query: 320 YSDCSSAKRGGDLGMFGKGQMQKAFEEEAFTLPIGQLSKPIET 448
S S+A D G+FG +K L QL++ + T
Sbjct: 635 CS-LSAADSTSDTGVFGSRVPKKGMFRTVSQLYKEQLARLMST 676
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 55 DENEPLNWDVILPEHIYQKIT--VGATRSTCRAHGDPMQSYPGQ 180
DENE N DV LPE + T V ++ C +G +SY G+
Sbjct: 742 DENEVENDDVALPEGMQTSTTTVVANGKTRCYRNGSCAKSYQGE 785
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 55 DENEPLNWDVILPEHIYQKIT--VGATRSTCRAHGDPMQSYPGQ 180
DENE N DV LPE + T V ++ C +G +SY G+
Sbjct: 781 DENEVENDDVALPEGMQTSTTTVVANGKTRCYRNGSCAKSYQGE 824
>Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical
protein C07A9.4 protein.
Length = 590
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -2
Query: 167 DCIGSP*ALQVLLVAPTVIFWYMCSGSMTSQLSGSFSSPSRRATVRHFRLTFS 9
+C SP A++++L+ VI+ + M S + F SPS + V H R++ S
Sbjct: 88 ECASSP-AVRIILIITGVIYMLVLF-IMVSSAADDFFSPSISSIVAHLRISES 138
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 11 RMSNENDAPLPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
R+ + PLP+GW + S +GM Y + +T+ +P
Sbjct: 167 RIDLDKSNPLPEGWTV-ISHQSGMPVYYHKFTRVVTHSKP 205
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 55 DENEPLNWDVILPEHIYQKIT--VGATRSTCRAHGDPMQSYPG 177
DENE N DV LPE + T V ++ C +G +SY G
Sbjct: 742 DENEVENDDVALPEGMQTSTTTVVANGKTRCYRNGSCAKSYQG 784
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical protein
F01G4.3 protein.
Length = 1266
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 156 ISVSSAGASGRSHCDFLVYVFR*YDIPVERLVLISQPSGNG 34
+S S G G +HC + FR +IP+ +V + + G
Sbjct: 909 LSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKG 949
>Z82092-1|CAB05010.1| 196|Caenorhabditis elegans Hypothetical
protein ZK384.1 protein.
Length = 196
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 11 RMSNENDAPLPDGWEMRTSRSTGMSYY 91
R++ + A PDG E+ R+ GM+YY
Sbjct: 66 RLAQDYVADCPDGLEIPIGRNIGMNYY 92
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 138 LQSSRRSDAVISWSNMCKAAGRHHGVRTTLHA 233
+++ +R A + W+N AAG HH VR H+
Sbjct: 5142 IKAVKRGHAQV-WTNRVLAAGDHHKVRVRAHS 5172
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 138 LQSSRRSDAVISWSNMCKAAGRHHGVRTTLHA 233
+++ +R A + W+N AAG HH VR H+
Sbjct: 5119 IKAVKRGHAQV-WTNRVLAAGDHHKVRVRAHS 5149
>Z47070-6|CAM84806.1| 212|Caenorhabditis elegans Hypothetical
protein F15G9.4c protein.
Length = 212
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 138 LQSSRRSDAVISWSNMCKAAGRHHGVRTTLHA 233
+++ +R A + W+N AAG HH VR H+
Sbjct: 156 IKAVKRGHAQV-WTNRVLAAGDHHKVRVRAHS 186
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 138 LQSSRRSDAVISWSNMCKAAGRHHGVRTTLHA 233
+++ +R A + W+N AAG HH VR H+
Sbjct: 5142 IKAVKRGHAQV-WTNRVLAAGDHHKVRVRAHS 5172
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 138 LQSSRRSDAVISWSNMCKAAGRHHGVRTTLHA 233
+++ +R A + W+N AAG HH VR H+
Sbjct: 5119 IKAVKRGHAQV-WTNRVLAAGDHHKVRVRAHS 5149
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 138 LQSSRRSDAVISWSNMCKAAGRHHGVRTTLHA 233
+++ +R A + W+N AAG HH VR H+
Sbjct: 5142 IKAVKRGHAQV-WTNRVLAAGDHHKVRVRAHS 5172
>Z46828-4|CAA86859.1| 207|Caenorhabditis elegans Hypothetical
protein R03D7.6 protein.
Length = 207
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 278 IVANDITFVDIATKYSDCSSAKRGGDLGMFGKGQMQKAFEEEAFTLPIGQLSKPIET 448
+V + +T++D+A +GGD F K KA E+ +P Q+ K IET
Sbjct: 150 LVGDSLTWIDLAIAQHSADLIAKGGD---FSKFPELKAHAEKIQAIP--QIKKWIET 201
>U55364-13|AAM29677.1| 250|Caenorhabditis elegans Hypothetical
protein F21C10.3b protein.
Length = 250
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 89 YLNTYTKKSQWERPEAPAELTEIR 160
++ Y KK++ ERPE P +L +R
Sbjct: 213 FIAYYAKKNESERPEVPKDLEPLR 236
>U55364-12|AAA97977.2| 260|Caenorhabditis elegans Hypothetical
protein F21C10.3a protein.
Length = 260
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 89 YLNTYTKKSQWERPEAPAELTEIR 160
++ Y KK++ ERPE P +L +R
Sbjct: 213 FIAYYAKKNESERPEVPKDLEPLR 236
>AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical
protein Y92H12BM.1 protein.
Length = 157
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 50 WEMRTSRSTGMSYYLNTYTKKSQWERP 130
WE+ S+ TG YY N + ++W++P
Sbjct: 9 WELFDSK-TGRYYYYNASSSVTKWQKP 34
>Z50027-7|CAA90332.3| 460|Caenorhabditis elegans Hypothetical
protein C39B10.2a protein.
Length = 460
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -1
Query: 456 PESVSIGLLSCPIGNVKASSSNAFCICPFPNIPKSPPRLADEQSEYLVAISTKVISLATI 277
P V +G+ +GN + SS +F + + + PRLA S+Y++ + ++ +
Sbjct: 50 PLGVKLGMYLESLGNFR-SSEMSFDVDLYVYMSWQDPRLAHNFSDYVLINNDEIRKQIWL 108
Query: 276 CLRYFFNISRAS 241
YF N +AS
Sbjct: 109 PDLYFANARQAS 120
>Z50027-6|CAO82026.1| 564|Caenorhabditis elegans Hypothetical
protein C39B10.2b protein.
Length = 564
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -1
Query: 456 PESVSIGLLSCPIGNVKASSSNAFCICPFPNIPKSPPRLADEQSEYLVAISTKVISLATI 277
P V +G+ +GN + SS +F + + + PRLA S+Y++ + ++ +
Sbjct: 50 PLGVKLGMYLESLGNFR-SSEMSFDVDLYVYMSWQDPRLAHNFSDYVLINNDEIRKQIWL 108
Query: 276 CLRYFFNISRAS 241
YF N +AS
Sbjct: 109 PDLYFANARQAS 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,743,938
Number of Sequences: 27780
Number of extensions: 247634
Number of successful extensions: 864
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -