Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K19
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    24   0.71 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          24   0.94 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   0.94 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   2.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.8  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 8   ARMSNENDAPLPDGWEMRTSRSTGMSYYLNTY 103
           A  +N+N   L D W+  T     +  YLNTY
Sbjct: 182 ALYNNKNFVDLSDYWKSGTWDIINVPAYLNTY 213


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 86  YYLNTYTKKSQWERPEAPAELT 151
           + +N   +K  W RP  PA+ T
Sbjct: 35  WVVNNIKRKRWWSRPREPAQTT 56


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 95  NTYTKKSQWERPEAPAELT 151
           N   +K  W RP  PA+ T
Sbjct: 160 NNIKRKRSWSRPREPAQTT 178


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = -2

Query: 116 VIFWYMCSG 90
           ++FWY+C+G
Sbjct: 781 ILFWYLCAG 789


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = -2

Query: 116 VIFWYMCSG 90
           ++FWY+C+G
Sbjct: 819 ILFWYLCAG 827


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -1

Query: 417 GNVKASSSNAFCICPFPNIPKSPPRLADEQSEYLVAISTKVISLAT 280
           GN     + A  +  +  I   P +++DE+   L A+  K+I   T
Sbjct: 107 GNTGIGLAMAAAVRGYKCIIVMPEKMSDEKISTLYALGAKIIRTPT 152


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 37  VARRLGDENEPLNWDVILPEHIYQKI 114
           +  RLG     +NW   +PE  + K+
Sbjct: 250 LCNRLGRVKRFINWHEPIPEAYFPKL 275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,497
Number of Sequences: 438
Number of extensions: 2935
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)