Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K18
(456 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 219 3e-57
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 218 6e-57
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 218 6e-57
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 218 6e-57
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 218 6e-57
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 218 6e-57
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 218 6e-57
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 218 6e-57
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 218 6e-57
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 187 1e-47
AK127658-1|BAC87076.1| 626|Homo sapiens protein ( Homo sapiens ... 31 1.4
AB082533-1|BAC02711.1| 764|Homo sapiens KIAA2002 protein protein. 31 1.4
X83394-1|CAA58313.1| 366|Homo sapiens HLA-C alpha chain protein. 31 1.9
U09853-1|AAA50217.1| 366|Homo sapiens HLA-Cw7 protein. 31 1.9
M28207-1|AAA53259.1| 290|Homo sapiens MHC class I lymphocyte an... 31 1.9
M11886-1|AAA52665.1| 342|Homo sapiens transplantation antigen p... 31 1.9
D83957-1|BAA22206.1| 366|Homo sapiens HLA class I antigen protein. 31 1.9
D49819-1|BAA08625.1| 366|Homo sapiens HLA-Cw*0702 protein. 31 1.9
D49552-1|BAA08500.1| 366|Homo sapiens HLA-Cw*0704 protein. 31 1.9
D38526-1|BAA07531.1| 366|Homo sapiens HLA-Cw*0702 protein. 31 1.9
DQ983641-1|ABI99472.1| 366|Homo sapiens MHC class I antigen pro... 31 1.9
DQ359691-1|ABD60574.1| 366|Homo sapiens MHC class I antigen pro... 31 1.9
BC033293-1|AAH33293.1| 366|Homo sapiens major histocompatibilit... 31 1.9
BC007814-1|AAH07814.2| 365|Homo sapiens HLA-C protein protein. 31 1.9
BA000025-55|BAB63310.1| 366|Homo sapiens HLA-C protein. 31 1.9
AY929155-1|AAX98239.1| 366|Homo sapiens MHC class I antigen pro... 31 1.9
AY714373-1|AAU14145.1| 366|Homo sapiens MHC class I antigen pre... 31 1.9
AY619989-1|AAT41622.1| 366|Homo sapiens MHC class I antigen pre... 31 1.9
AY603356-1|AAV39503.1| 365|Homo sapiens MHC class I antigen pro... 31 1.9
AY509618-1|AAR99594.1| 366|Homo sapiens MHC class I antigen pre... 31 1.9
AY509615-1|AAR99591.1| 366|Homo sapiens MHC class I antigen pre... 31 1.9
AY162385-1|AAN84536.1| 67|Homo sapiens MHC class I antigen pro... 31 1.9
AY064404-1|AAL49978.1| 366|Homo sapiens MHC class I antigen pro... 31 1.9
AM749670-1|CAO78194.1| 365|Homo sapiens MHC class I antigen pro... 31 1.9
AM748047-1|CAO00838.1| 365|Homo sapiens MHC class I antigen pro... 31 1.9
AM696284-1|CAM90595.1| 366|Homo sapiens MHC class I antigen pro... 31 1.9
AL671883-3|CAI18144.1| 366|Homo sapiens major histocompatibilit... 31 1.9
AL662833-16|CAI17409.1| 366|Homo sapiens major histocompatibili... 31 1.9
AJ971029-1|CAI94871.1| 366|Homo sapiens MHC class I antigen pro... 31 1.9
AJ293017-1|CAC04322.1| 366|Homo sapiens human leucocyte antigen... 31 1.9
AJ293016-1|CAC04321.1| 366|Homo sapiens human leucocyte antigen... 31 1.9
AJ291815-1|CAC19191.1| 366|Homo sapiens MHC class I antigen pro... 31 1.9
AJ010749-1|CAA09341.1| 366|Homo sapiens HLA class I antigen pro... 31 1.9
AY233979-1|AAO84019.1| 366|Homo sapiens MHC class I antigen pro... 30 4.3
AF509727-1|AAP30863.1| 366|Homo sapiens MHC class I antigen pro... 30 4.3
AK123339-1|BAC85585.1| 174|Homo sapiens . protein. 29 10.0
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 219 bits (536), Expect = 3e-57
Identities = 102/144 (70%), Positives = 115/144 (79%)
Frame = +3
Query: 24 ARMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 203
A MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VH
Sbjct: 8 AAMSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVH 67
Query: 204 SRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 383
SRAR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH
Sbjct: 68 SRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRH 127
Query: 384 LYHSLYMKAKGNVFKNKRVLMEYI 455
+YHSLY+K KGNVFKNKR+LME+I
Sbjct: 128 MYHSLYLKVKGNVFKNKRILMEHI 151
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 218 bits (533), Expect = 6e-57
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +3
Query: 30 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 209
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 210 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 389
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 390 HSLYMKAKGNVFKNKRVLMEYI 455
HSLY+K KGNVFKNKR+LME+I
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHI 142
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 218 bits (533), Expect = 6e-57
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +3
Query: 30 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 209
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 210 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 389
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 390 HSLYMKAKGNVFKNKRVLMEYI 455
HSLY+K KGNVFKNKR+LME+I
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHI 142
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 218 bits (533), Expect = 6e-57
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +3
Query: 30 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 209
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 210 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 389
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 390 HSLYMKAKGNVFKNKRVLMEYI 455
HSLY+K KGNVFKNKR+LME+I
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHI 142
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 218 bits (533), Expect = 6e-57
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +3
Query: 30 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 209
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 210 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 389
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 390 HSLYMKAKGNVFKNKRVLMEYI 455
HSLY+K KGNVFKNKR+LME+I
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHI 142
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 218 bits (533), Expect = 6e-57
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +3
Query: 30 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 209
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 210 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 389
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 390 HSLYMKAKGNVFKNKRVLMEYI 455
HSLY+K KGNVFKNKR+LME+I
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHI 142
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 218 bits (533), Expect = 6e-57
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +3
Query: 30 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 209
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 210 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 389
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 390 HSLYMKAKGNVFKNKRVLMEYI 455
HSLY+K KGNVFKNKR+LME+I
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHI 142
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 218 bits (533), Expect = 6e-57
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +3
Query: 30 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 209
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 210 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 389
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 390 HSLYMKAKGNVFKNKRVLMEYI 455
HSLY+K KGNVFKNKR+LME+I
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHI 142
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 218 bits (533), Expect = 6e-57
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +3
Query: 30 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 209
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 210 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 389
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 390 HSLYMKAKGNVFKNKRVLMEYI 455
HSLY+K KGNVFKNKR+LME+I
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHI 142
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 187 bits (456), Expect = 1e-47
Identities = 86/123 (69%), Positives = 96/123 (78%)
Frame = +3
Query: 87 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 266
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 267 KRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLM 446
KR+GTANARMP+K W +KKIDRH+YHSLY+K KGNVFKNKR+LM
Sbjct: 61 KRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILM 120
Query: 447 EYI 455
E+I
Sbjct: 121 EHI 123
>AK127658-1|BAC87076.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ45756 fis, clone MESAN2009156. ).
Length = 626
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 278 TSPLTKATVTSFPTRLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDL 111
T P++K S + LCV AN + +D NW D + ++ L G+ I + L
Sbjct: 413 TEPISKDLQKSMESSLCVMANPTYDIDPNW--DASSAGSSISYELKGLDIESYDSL 466
>AB082533-1|BAC02711.1| 764|Homo sapiens KIAA2002 protein protein.
Length = 764
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 278 TSPLTKATVTSFPTRLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDL 111
T P++K S + LCV AN + +D NW D + ++ L G+ I + L
Sbjct: 183 TEPISKDLQKSMESSLCVMANPTYDIDPNW--DASSAGSSISYELKGLDIESYDSL 236
>X83394-1|CAA58313.1| 366|Homo sapiens HLA-C alpha chain protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>U09853-1|AAA50217.1| 366|Homo sapiens HLA-Cw7 protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>M28207-1|AAA53259.1| 290|Homo sapiens MHC class I lymphocyte
antigen protein.
Length = 290
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 242 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 279
>M11886-1|AAA52665.1| 342|Homo sapiens transplantation antigen
protein.
Length = 342
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 294 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 331
>D83957-1|BAA22206.1| 366|Homo sapiens HLA class I antigen protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>D49819-1|BAA08625.1| 366|Homo sapiens HLA-Cw*0702 protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>D49552-1|BAA08500.1| 366|Homo sapiens HLA-Cw*0704 protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>D38526-1|BAA07531.1| 366|Homo sapiens HLA-Cw*0702 protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>DQ983641-1|ABI99472.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>DQ359691-1|ABD60574.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>BC033293-1|AAH33293.1| 366|Homo sapiens major histocompatibility
complex, class I, C protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>BC007814-1|AAH07814.2| 365|Homo sapiens HLA-C protein protein.
Length = 365
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 317 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 354
>BA000025-55|BAB63310.1| 366|Homo sapiens HLA-C protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY929155-1|AAX98239.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY714373-1|AAU14145.1| 366|Homo sapiens MHC class I antigen
precusor protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY619989-1|AAT41622.1| 366|Homo sapiens MHC class I antigen
precusor protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY603356-1|AAV39503.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY509618-1|AAR99594.1| 366|Homo sapiens MHC class I antigen
precursor protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY509615-1|AAR99591.1| 366|Homo sapiens MHC class I antigen
precursor protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY162385-1|AAN84536.1| 67|Homo sapiens MHC class I antigen
protein.
Length = 67
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 19 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 56
>AY064404-1|AAL49978.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AM749670-1|CAO78194.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AM748047-1|CAO00838.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AM696284-1|CAM90595.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AL671883-3|CAI18144.1| 366|Homo sapiens major histocompatibility
complex, class I, C protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AL662833-16|CAI17409.1| 366|Homo sapiens major histocompatibility
complex, class I, C protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ971029-1|CAI94871.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ293017-1|CAC04322.1| 366|Homo sapiens human leucocyte antigen C
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ293016-1|CAC04321.1| 366|Homo sapiens human leucocyte antigen C
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ291815-1|CAC19191.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ010749-1|CAA09341.1| 366|Homo sapiens HLA class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS + C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY233979-1|AAO84019.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQVACSNSAQ 355
>AF509727-1|AAP30863.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 250 VTVALVRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 363
+ V V G V + C +K+ G KG CS C N+ Q
Sbjct: 318 LVVLAVLGAVVTAMMCRRKSSGGKGGSCSQVACSNSAQ 355
>AK123339-1|BAC85585.1| 174|Homo sapiens . protein.
Length = 174
Score = 28.7 bits (61), Expect = 10.0
Identities = 30/108 (27%), Positives = 43/108 (39%)
Frame = -2
Query: 329 PLPLNP*FFLWHSSISCTSPLTKATVTSFPTRLCVFANTSAGMDSNWFLDDQTILDHLTD 150
P P++P L + S+SC P +V P L V + S L HL+
Sbjct: 75 PTPVHPLVSLSYLSLSCPHPSLFLSVLLLPFTLFVSPSLSV-------LPPSLSTLHLSL 127
Query: 149 VLSGISISDFIDLVWIKPHLFFTASHNRGCKPLL*L*GTHPGTVRSNP 6
+S IS+S + L PH + S C PL+ HP + P
Sbjct: 128 CVS-ISVSLSVSLPIPHPHSLSSPSSLPSCLPLIWFILLHPAAPPTEP 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,780,672
Number of Sequences: 237096
Number of extensions: 1284876
Number of successful extensions: 2620
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 2554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2609
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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