Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K17
(460 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 215 5e-55
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 209 2e-53
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 207 8e-53
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 173 2e-42
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 172 3e-42
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 163 1e-39
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 158 6e-38
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 150 1e-35
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 141 6e-33
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 134 1e-30
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 130 1e-29
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 113 1e-24
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 109 3e-23
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 83 3e-15
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 79 6e-14
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 76 4e-13
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 75 6e-13
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 67 2e-10
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 55 6e-07
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 55 8e-07
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 54 1e-06
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 43 0.004
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 43 0.004
UniRef50_Q4Q1Y0 Cluster: Putative uncharacterized protein; n=2; ... 36 0.32
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 36 0.32
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 34 1.7
UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, who... 34 1.7
UniRef50_Q22B09 Cluster: Putative uncharacterized protein; n=1; ... 33 2.2
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 33 3.0
UniRef50_A4RG81 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_A7GNA9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A6GI93 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q4T2R9 Cluster: Chromosome undetermined SCAF10201, whol... 31 9.0
UniRef50_Q097C6 Cluster: ABC transporter, inner membrane protein... 31 9.0
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 215 bits (524), Expect = 5e-55
Identities = 99/120 (82%), Positives = 111/120 (92%)
Frame = +1
Query: 100 STMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 279
+ MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 141 TAMPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 200
Query: 280 TVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMRP 459
TV L +QNRQA ISVVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++ IA++MRP
Sbjct: 201 TVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRP 260
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 209 bits (511), Expect = 2e-53
Identities = 96/119 (80%), Positives = 109/119 (91%)
Frame = +1
Query: 100 STMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 279
STMPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+I
Sbjct: 31 STMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRI 90
Query: 280 TVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
TV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI ++++ I + MR
Sbjct: 91 TVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMR 149
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 207 bits (506), Expect = 8e-53
Identities = 95/117 (81%), Positives = 108/117 (92%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI ++++ IA+ MR
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMR 117
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 173 bits (420), Expect = 2e-42
Identities = 80/119 (67%), Positives = 100/119 (84%), Gaps = 1/119 (0%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKIT 282
MPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++T
Sbjct: 63 MPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRVT 122
Query: 283 VQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMRP 459
V+L VQNRQA++SVVP+A+AL+I+ALKEP +DRKK K I H GN ++D+I +A++MRP
Sbjct: 123 VKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVMRP 181
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 172 bits (419), Expect = 3e-42
Identities = 85/141 (60%), Positives = 107/141 (75%), Gaps = 24/141 (17%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------- 264
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 265 -----------------KGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQK 393
KGL++TV+L +QNRQA +SVVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 394 NIKHNGNIPMEDVIGIAQIMR 456
NIKHN +IP++D+I IA+ MR
Sbjct: 121 NIKHNKSIPLDDIIEIARTMR 141
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 163 bits (397), Expect = 1e-39
Identities = 76/118 (64%), Positives = 94/118 (79%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 56 MPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVTC 115
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMRP 459
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI +++ IA+ P
Sbjct: 116 QLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKESAP 173
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 158 bits (383), Expect = 6e-38
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 142 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQIS 321
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 322 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMRP 459
VVPSA+ALII+ALKEPPRDRKKQKN + +P + Q+ RP
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN-SESAPLPGFPLQCATQLCRP 210
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 150 bits (364), Expect = 1e-35
Identities = 68/105 (64%), Positives = 87/105 (82%)
Frame = +1
Query: 142 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQIS 321
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+L +QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 322 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
VVP++A+++++ L E PRDRKK KNIKHNGN+ +E V IA+ M+
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAMK 129
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 141 bits (342), Expect = 6e-33
Identities = 59/114 (51%), Positives = 87/114 (76%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQ 447
L QNR A ++V+P+++AL+I+ + RDRKK KN+KHNGN+ +E VI +A+
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVAR 114
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 134 bits (323), Expect = 1e-30
Identities = 64/105 (60%), Positives = 72/105 (68%)
Frame = -3
Query: 416 IFPLCLMFFCFLRSRGGSLRALMISAAAEGTTEICACLFCTINWTVILRPFQSLVALAMS 237
+ PLCL F F S GGS +A+M A+GTTE ACLF NWTV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 236 SPTFFGERPRGPILGAKEDVAPTSPPTHLKLTILISLGSNLGGIV 102
SPTFFG++P GPI GAK APTSPPT LK L S GSN GGI+
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGSNFGGIL 105
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 130 bits (314), Expect = 1e-29
Identities = 66/113 (58%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Frame = +1
Query: 121 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIV 297
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 298 QNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG++ M +V+ IA+I R
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIAR 117
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 113 bits (273), Expect = 1e-24
Identities = 66/119 (55%), Positives = 76/119 (63%)
Frame = +1
Query: 100 STMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 279
ST PKF P EIK+ LRC G EV A S+LAPKI PLGLSPKK
Sbjct: 127 STTLPKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPKK----------------- 169
Query: 280 TVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI ++++ IA+ MR
Sbjct: 170 --------GQAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMR 220
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 109 bits (262), Expect = 3e-23
Identities = 50/117 (42%), Positives = 80/117 (68%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
+++ +NRQ +SVVP+A++L+++AL E PR K + + H G + + V+ IA+ +R
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAKELR 117
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 83.0 bits (196), Expect = 3e-15
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +1
Query: 139 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 291
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+L
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKL 83
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 78.6 bits (185), Expect = 6e-14
Identities = 41/117 (35%), Positives = 65/117 (55%)
Frame = -2
Query: 456 THYLGNANDIFHWDISIVFNXXXXXXXXXXLFESSDD*CSCRGHH*NLRLSVLHYQLDRD 277
+H L N +D+F ++ VF+ +S D+ ++ + LSVL QL+ +
Sbjct: 64 SHLLSNFDDVFQLQVTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSN 123
Query: 276 LETLPVTSGFSDVITNLFWGETKGTDFRSQGGRSTDFSTNTS*VDDFNFIRIKFRRH 106
L+TL + G D+ TNL WG+T+ T+ SQ ST+F+T++S V +FI IK RH
Sbjct: 124 LDTLEILGGLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRH 180
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 75.8 bits (178), Expect = 4e-13
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 136 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDWKGLKITVQLIVQNRQA 312
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++L + + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 313 QISVVPSAAALIIRALK 363
+ +VPS ++L+ R ++
Sbjct: 67 YLKIVPSVSSLLKREMQ 83
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 75.4 bits (177), Expect = 6e-13
Identities = 41/116 (35%), Positives = 56/116 (48%)
Frame = -2
Query: 453 HYLGNANDIFHWDISIVFNXXXXXXXXXXLFESSDD*CSCRGHH*NLRLSVLHYQLDRDL 274
H N +++ D+S V E DD R +H NL LSVL Q D
Sbjct: 34 HLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRYHLNLSLSVLDRQFHSDP 93
Query: 273 ETLPVTSGFSDVITNLFWGETKGTDFRSQGGRSTDFSTNTS*VDDFNFIRIKFRRH 106
+TLP+TS DVI +LFW +T+G + QG R TD T V DF+ + ++ H
Sbjct: 94 QTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLVGVELGWH 149
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 66.9 bits (156), Expect = 2e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 216
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
Score = 35.9 bits (79), Expect = 0.42
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 394 NIKHNGNIPMEDVIGIAQIMRP 459
++KHNGNI ++DV +A++MRP
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRP 88
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 55.2 bits (127), Expect = 6e-07
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 355 ALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
A KEPPRDRKKQKNIKH+GNI ++++ IA+ MR
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMR 207
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 54.8 bits (126), Expect = 8e-07
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +1
Query: 136 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIV--QNRQ 309
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++IV + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 310 AQISV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
+I V +P ALI + L + + + GN+ +E VI IA++ +
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKK 111
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 54.0 bits (124), Expect = 1e-06
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +1
Query: 136 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIV--QNRQ 309
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++IV R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 310 AQISV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQI 450
++ V +P A+ALI + + ++ + + GNI ME ++ IA++
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKM 109
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 42.7 bits (96), Expect = 0.004
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Frame = +1
Query: 160 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIV---QNRQAQISV-V 327
GG+ + P +GPLGL+ +V +I + T +++G+++ V + V + ++ +I+V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 328 PSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIA 444
P +AL+ + L KK++ + GN +E + +A
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVA 107
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 42.7 bits (96), Expect = 0.004
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +1
Query: 136 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLK--ITVQLIVQNRQ 309
K + + GG L P + LGL+ ++V I T+ +KG+ +T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 310 AQISV-VPSAAALIIRAL--KEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMRP 459
I V VP+ +L+++A+ +EP D +K GN+ +E + IA +P
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKK----IGNLDLEQIADIAIKKKP 112
>UniRef50_Q4Q1Y0 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 851
Score = 36.3 bits (80), Expect = 0.32
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = -3
Query: 434 MTSSIGIFPLCLMFFCFLRSRGGSLRALMISAAAEGTT 321
+ +S+G+ +CL + CFLRSR + AL ++ AA+GTT
Sbjct: 125 LRASVGLHTVCLGYNCFLRSRLSGVSAL-VANAAQGTT 161
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 36.3 bits (80), Expect = 0.32
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -1
Query: 268 PSSH*WL*RCHHQPFLGRDQGDRF*EPRRT*HRL 167
PSSH +CHHQPFL D G R P + HRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 33.9 bits (74), Expect = 1.7
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Frame = +1
Query: 142 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGD-----DIAKATSDWKGLKITVQL 291
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 292 IVQNRQ-AQISVVPSAAALIIRALKEPPRDRK 384
VQ R+ A+++V P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_4,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 169
Score = 33.9 bits (74), Expect = 1.7
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 268 GLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHN 408
GLK+ ++ + + Q SV+ + AL+I A + PR+++KQK ++ N
Sbjct: 77 GLKLILENMPKEVQRNQSVIRNFLALLIHARLQQPRNKQKQKKLRLN 123
>UniRef50_Q22B09 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 660
Score = 33.5 bits (73), Expect = 2.2
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 163 GEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQ-ISVVPSAA 339
GE+ A S L KI LS K + +WK +K +Q I+Q + +Q I++ S
Sbjct: 499 GEIQAYSLLIIKIY---LSQIKTSTQSIQTYLNWKFIKYNIQKIIQLKASQNINIAASKL 555
Query: 340 ALIIRALKEPPRDRKKQKNIK 402
LI+ + K + KN K
Sbjct: 556 NLILTSQKTDTNENANSKNTK 576
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.1 bits (72), Expect = 3.0
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 217 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 396
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 397 IKHNGNI 417
+++ N+
Sbjct: 595 LEYGSNV 601
>UniRef50_A4RG81 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 558
Score = 32.3 bits (70), Expect = 5.2
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = -3
Query: 233 PTFFGERPRGPILGAKEDVAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKP 54
P F ++ +GP + + + AP PPT L + + GS+ +Y ++ Y + P
Sbjct: 28 PAFRNQQHQGPQIPRQHETAPLPPPTSLSAS--SAGGSSTLAFSSPSY-HHSHHYAPTSP 84
Query: 53 MNLDIKGVQPSK 18
++ D+ G + SK
Sbjct: 85 LSQDVSGAEASK 96
>UniRef50_A7GNA9 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
Putative uncharacterized protein - Bacillus cereus
subsp. cytotoxis NVH 391-98
Length = 460
Score = 31.9 bits (69), Expect = 6.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 258 TSGFSDVITNLFWGETKGTDFRSQ 187
T+ FSD + ++W ET+ TD+ SQ
Sbjct: 190 TTSFSDYVNEIYWRETRPTDWESQ 213
>UniRef50_A6GI93 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 756
Score = 31.9 bits (69), Expect = 6.8
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = -3
Query: 197 LGAKEDVAPTSPPTHLKLTILISLG-------SNLGGIVLTNYCNNKSLYNNSKP 54
LG + D A + PT L ++SLG SN G I+ ++C +L NSKP
Sbjct: 74 LGLEYDPAALTQPTEFPLGAIVSLGGCSASFVSNEGLIITNHHCVTGALARNSKP 128
>UniRef50_Q4T2R9 Cluster: Chromosome undetermined SCAF10201, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10201, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 990
Score = 31.5 bits (68), Expect = 9.0
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +1
Query: 151 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVP 330
RC G +G SSL P P K+ G +A D GLK + + +
Sbjct: 125 RCAGEALGK-SSLLPV--PYDAILKEPGCVVAHGLPDGVGLKKPCEYDTRTLMKILEQSH 181
Query: 331 SAAALIIRALKEPPRDRKKQKNIKHN 408
+ R ++PPRD K ++ HN
Sbjct: 182 RIQFSVTRPAEDPPRDAKTSADLNHN 207
>UniRef50_Q097C6 Cluster: ABC transporter, inner membrane protein,
putative; n=1; Stigmatella aurantiaca DW4/3-1|Rep: ABC
transporter, inner membrane protein, putative -
Stigmatella aurantiaca DW4/3-1
Length = 546
Score = 31.5 bits (68), Expect = 9.0
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +1
Query: 124 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIVQN 303
PNE+K ++ +GG+ A A ++ P P + + + G+K+ QL+
Sbjct: 262 PNELKAIDQFLMGGKSAAFFLDAIQVDPRNFEPSDAEHGLGPLLATY-GVKLGDQLVADA 320
Query: 304 RQAQISVVPSAAALII 351
R Q+S+ ++I
Sbjct: 321 RSGQLSMQEQRGFMVI 336
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,958,206
Number of Sequences: 1657284
Number of extensions: 8447884
Number of successful extensions: 26390
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 25621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26381
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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