Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K17
(460 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0416 + 28791512-28792012 183 5e-47
04_04_1026 + 30214437-30214937 181 3e-46
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 30 1.0
06_01_0796 - 5932794-5934212,5934955-5935013,5936324-5936414 29 2.4
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 29 2.4
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 28 3.1
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440... 28 3.1
09_01_0182 + 2646917-2647048,2648380-2648476,2648554-2648597,264... 28 4.2
08_01_0500 + 4338111-4338195,4339910-4340042,4340116-4340187,434... 28 4.2
08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,443... 27 5.5
04_04_1551 - 34348110-34348225,34348468-34348606,34348658-343488... 27 5.5
04_04_0453 - 25346114-25346214,25346600-25346699,25346901-253469... 27 5.5
03_05_0441 + 24350026-24350081,24350186-24351011,24351088-243511... 27 5.5
11_01_0669 - 5454116-5454153,5454569-5454770,5454865-5455029,545... 27 7.3
07_01_0415 - 3160059-3160445,3160584-3160727,3160903-3160971,316... 27 7.3
04_01_0528 - 6917414-6919849 27 7.3
03_01_0626 + 4596022-4596462,4596549-4596667,4596745-4596801,459... 27 7.3
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 27 9.6
10_01_0190 + 2107854-2108135,2108215-2109272,2110561-2110681 27 9.6
08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435... 27 9.6
04_01_0530 - 6928528-6929500,6929514-6930964 27 9.6
03_01_0047 + 391689-392738,392832-392999,393091-393195,393529-39... 27 9.6
01_06_0857 - 32507119-32507328,32507936-32508058,32508194-325082... 27 9.6
>02_05_0416 + 28791512-28792012
Length = 166
Score = 183 bits (446), Expect = 5e-47
Identities = 86/119 (72%), Positives = 104/119 (87%), Gaps = 1/119 (0%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKIT 282
MPPK DP ++ V +R GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T+ DWKGL++T
Sbjct: 1 MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
Query: 283 VQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMRP 459
V+L VQNRQA++SVVPSAAAL+I+ALKEP RDRKK KNIKH+GNI ++DVI IA++MRP
Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARVMRP 119
>04_04_1026 + 30214437-30214937
Length = 166
Score = 181 bits (440), Expect = 3e-46
Identities = 86/118 (72%), Positives = 103/118 (87%), Gaps = 1/118 (0%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKIT 282
MPPK DP ++ V +R GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T+ DWKGL++T
Sbjct: 1 MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
Query: 283 VQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIPMEDVIGIAQIMR 456
V+L VQNRQA++SVVPSAAAL+I+ALKEP RDRKK KNIKH+GNI ++DVI IA+IMR
Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARIMR 118
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 242 MSSPTFFGERPR-GPILGAKEDVAPTSPPT 156
MS+P FFG+ P+ P +GA + T PPT
Sbjct: 444 MSAPPFFGQLPQVQPQIGATAALGGTQPPT 473
>06_01_0796 - 5932794-5934212,5934955-5935013,5936324-5936414
Length = 522
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 262 WKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQ 390
W + V V + + V+P+A A +IRA+ + P R++Q
Sbjct: 33 WYSYLVDVDADVDDDMISLRVLPNARAALIRAVADAPGRREEQ 75
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -3
Query: 209 RGPILGAKEDVAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNLDIKGV 30
R P K +P+ P + + S + L +V + NN + ++SKP+ +GV
Sbjct: 80 RAPAPSPKPSPSPSPSP---RRSTSASPSATLSSLVSRTFSNNAASSSSSKPLPSLFRGV 136
Query: 29 QPSKR 15
+PS +
Sbjct: 137 RPSPK 141
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 28.3 bits (60), Expect = 3.1
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Frame = -3
Query: 353 LMISAAAEGTTEICACLFCTINWTVILR-PFQSLVALAMSSP-TFFGERPRGPILGAKED 180
LM+ + + TE+ + T WT + R F +++ +A S F L K D
Sbjct: 164 LMVGSNGDSMTEVFQSIMKTEGWTGLFRGNFVNVIRVAPSKAIELFAFDTAKKFLTPKAD 223
Query: 179 VAPTSP-PTHLKLTILISLGSNLG----GIVLTNYCNNKSLYNN 63
+P +P P L L + S L ++ T K +YNN
Sbjct: 224 ESPKTPFPPSLIAGALAGVSSTLCTYPLELIKTRLTIEKDVYNN 267
>04_04_0111 -
22842337-22842648,22843008-22843402,22843732-22844073,
22844154-22844282,22844402-22844514,22844596-22844667,
22844783-22844859,22844978-22845052,22845058-22845121,
22845332-22845403,22845496-22845628,22846859-22846961
Length = 628
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 206 GPILGAKEDVAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 45
G + + P PP + I+LGS G L ++C+ K ++ + K N+
Sbjct: 386 GSVASRLRERQPNDPPLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANI 439
>09_01_0182 +
2646917-2647048,2648380-2648476,2648554-2648597,
2649278-2649328
Length = 107
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 446 WAMPMTSSIGIFPLCLMFFCFLR 378
WA+ T IG+FPL L +F R
Sbjct: 14 WAVLQTIPIGLFPLLLAYFSLFR 36
>08_01_0500 +
4338111-4338195,4339910-4340042,4340116-4340187,
4340524-4340587,4341383-4341459,4341586-4341657,
4341741-4341853,4341995-4342126,4342204-4342545,
4342628-4343022,4343293-4343603,4343967-4344066
Length = 631
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -3
Query: 206 GPILGAKEDVAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 45
G + + P+ PP + I+LGS G L ++C+ K ++ + K N+
Sbjct: 356 GSVASRLRERPPSEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANI 409
>08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,
4437721-4437990,4438168-4438605,4438772-4439043,
4439126-4439274,4439339-4439470,4439554-4439880,
4439963-4440357,4440551-4440861,4441304-4441394,
4441806-4441847
Length = 1686
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 206 GPILGAKEDVAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 45
G + + P+ PP + I+ GS G L ++CN K ++ + K N+
Sbjct: 1400 GSVASRLRERPPSEPPLDWQTRRRIAAGSARGLSYLHDHCNPKIIHRDVKAANI 1453
>04_04_1551 -
34348110-34348225,34348468-34348606,34348658-34348896,
34349042-34349140,34349207-34350188,34350737-34350832,
34350936-34351064,34351253-34351332,34351420-34351661,
34351743-34352692
Length = 1023
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 145 NLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIA 246
N +C G E G S AP++ PLG+ PK G+ IA
Sbjct: 736 NSKCAGAE-GINS--APRVTPLGIRPKG-GESIA 765
>04_04_0453 -
25346114-25346214,25346600-25346699,25346901-25346962,
25347053-25347186,25347320-25347408,25347667-25347696
Length = 171
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 315 LRLSVLHYQLDRDLETLPVTSGFS 244
L+ S+LHY +++LE L +GFS
Sbjct: 129 LKSSILHYLTEKELEELAKEAGFS 152
>03_05_0441 +
24350026-24350081,24350186-24351011,24351088-24351189,
24351278-24351343,24351418-24351483,24351594-24351800,
24351925-24352086
Length = 494
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 212 PRGPILGAKEDVAPTSPPTHLKLTI 138
PR P + A + V PT P HL L +
Sbjct: 408 PRMPFMAAPQPVVPTPPVNHLDLGV 432
>11_01_0669 -
5454116-5454153,5454569-5454770,5454865-5455029,
5455278-5456183
Length = 436
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 118 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKV 231
F N +KIV ++C G EV +G G+ +K+
Sbjct: 375 FVSNHLKIVEIKCKGKEVMWVCKFLKTLGTFGIPLEKI 412
>07_01_0415 -
3160059-3160445,3160584-3160727,3160903-3160971,
3161072-3161190,3162246-3162321
Length = 264
Score = 27.1 bits (57), Expect = 7.3
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = -3
Query: 245 AMSSPTFFGERPRGPILGAKEDVAPT----SPPTHLKLTILISLGSNLGGIVLTNYCNNK 78
AM P G+ G L E APT SP + ++LG ++ V TN+CN++
Sbjct: 18 AMKFPIISGDSDLGKDLKFHESSAPTIAAYSPLQEYQGHFELALGHSM---VCTNFCNSE 74
Query: 77 SLYNNSKP 54
Y P
Sbjct: 75 QSYGVYSP 82
>04_01_0528 - 6917414-6919849
Length = 811
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 155 HLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 45
H L + ++LG + G L CN + ++ + KP N+
Sbjct: 615 HWSLRVQVALGVSRGLFYLHEECNKQIIHCDMKPQNI 651
>03_01_0626 +
4596022-4596462,4596549-4596667,4596745-4596801,
4596921-4597159,4597261-4597379,4597488-4597574,
4597673-4597720
Length = 369
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 443 AMPMTSSIGIFPLCLMFFCFLRSRGGSLRALMISAAAEGTTEICACLFCTINWTVILRPF 264
AM S+ PL L F FL L+ M + A+ + + C+ I+W ++ R
Sbjct: 41 AMAGRVSVWFIPLHLSF-AFLFPLQRFLQCQMKNFASAAASGVALCVHVAISWLLVSRFR 99
Query: 263 QSLVALAMS 237
LV +A++
Sbjct: 100 FGLVGIALT 108
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 130 EIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 291
E++ V ++ GG V A S L+ + + + +GD A+ W+ L +TV L
Sbjct: 24 ELEDVGIKAAGGAVAALSPLSETLWREKAAAEFLGDVSARLA--WRDLTVTVVL 75
>10_01_0190 + 2107854-2108135,2108215-2109272,2110561-2110681
Length = 486
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 302 FCTINWTVILRPFQSLVALAMSSPTFFGERPRGPILGAK 186
F ++W + P+ S V +A SP+ ++P + G K
Sbjct: 406 FNLVSWESRIPPYTSFVHMARFSPSLAEDKPESHLSGRK 444
>08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,
4351133-4353092,4353465-4353840,4353932-4354326,
4354597-4354765,4355444-4355518,4357699-4357826,
4357988-4358213,4358290-4358417,4358505-4358768
Length = 1520
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 173 PTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNLDI 39
P PP + I+LGS G L ++C+ K ++ + K N+ +
Sbjct: 1063 PYEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANISL 1107
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 155 HLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 45
H L + ++LG G + L CN + ++ + KP N+
Sbjct: 611 HWSLRVQVALGVARGLLYLHEECNKQIIHCDMKPQNI 647
>03_01_0047 +
391689-392738,392832-392999,393091-393195,393529-393611,
393899-394364
Length = 623
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 422 IGIFPLCLMFFCFLRSRGGSLRALMISAAAEGTTEI 315
IG+ P+ + +L GSLR ++ A+ GT +
Sbjct: 242 IGVVPMAMPVVLYLALAFGSLRLCLLGVASRGTVAL 277
>01_06_0857 -
32507119-32507328,32507936-32508058,32508194-32508262,
32509963-32510238
Length = 225
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 350 MISAAAEGTTEICACLFCTINWTVILRPFQSLVALAMSSPT 228
M A A GT+ IC C ++ RP L LA S PT
Sbjct: 1 MAHAFAGGTSAICRCPHDPGRAALVSRPRHRLRVLASSLPT 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,469,057
Number of Sequences: 37544
Number of extensions: 244086
Number of successful extensions: 759
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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