Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K15
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0135 - 13027496-13027933 33 0.097
07_03_0180 + 14804784-14805231,14806855-14806892,14807135-14807143 33 0.097
04_01_0312 + 4206400-4206627,4206661-4207269,4207425-4207902,420... 33 0.13
01_05_0044 + 17531005-17531739,17532624-17532956,17532968-17533027 33 0.13
06_03_0223 - 18391177-18391287,18391570-18392081,18392200-183930... 32 0.23
03_05_0310 + 23008915-23009841,23010401-23011162 32 0.23
11_04_0032 + 12545208-12545954 31 0.39
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 31 0.69
04_04_1405 - 33305948-33309676,33309749-33310468,33310533-333114... 31 0.69
04_03_0027 + 9667508-9668800 30 0.91
06_02_0306 + 14115751-14116450,14116882-14117691,14118957-14119141 30 1.2
02_03_0058 + 14536336-14536593,14536715-14536984 30 1.2
07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213 29 1.6
03_05_0186 + 21731294-21732277 29 2.1
03_01_0330 + 2566662-2566740,2566821-2566911,2567003-2567057,256... 29 2.8
08_02_0360 + 16196712-16197560,16198126-16198875 28 3.7
05_03_0344 - 12744727-12744837,12745116-12745574 28 3.7
11_04_0146 - 14091671-14092357,14092996-14093229 28 4.8
08_02_0235 + 14627648-14628889 28 4.8
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 27 8.5
10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834 27 8.5
10_02_0198 - 6611775-6612611 27 8.5
05_06_0064 + 25297268-25297612,25298150-25298237,25299608-252997... 27 8.5
05_03_0216 + 10370531-10371922,10378656-10378808 27 8.5
04_01_0187 - 2153546-2154520,2154581-2155858 27 8.5
>08_02_0135 - 13027496-13027933
Length = 145
Score = 33.5 bits (73), Expect = 0.097
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 26 DQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
++ W + +P L R A K IG + ++VYG+T +LP
Sbjct: 84 EEGWKDKLPDALWAYRTAHKTPIGMTPYQIVYGKTCQLP 122
>07_03_0180 + 14804784-14805231,14806855-14806892,14807135-14807143
Length = 164
Score = 33.5 bits (73), Expect = 0.097
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W +P L R A+K IG S +LVYG+T LP
Sbjct: 5 WKNKLPDALWAYRTAYKMPIGMSPYQLVYGKTCHLP 40
>04_01_0312 +
4206400-4206627,4206661-4207269,4207425-4207902,
4208006-4208297,4209278-4209569,4210013-4210465
Length = 783
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W + +P L R A+K IG S ++VYG++ +LP
Sbjct: 725 WKDRLPDTLWAYRTAYKTPIGMSPYQIVYGKSYRLP 760
>01_05_0044 + 17531005-17531739,17532624-17532956,17532968-17533027
Length = 375
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W + +P L R A+K IG S ++VYG++ +LP
Sbjct: 96 WKDRLPDALWAYRTAYKTPIGMSPYQIVYGKSCRLP 131
>06_03_0223 -
18391177-18391287,18391570-18392081,18392200-18393019,
18393603-18393671,18393973-18394062,18395381-18395575
Length = 598
Score = 32.3 bits (70), Expect = 0.23
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W +P L R A+K IG S +LVYG+T P
Sbjct: 413 WKNKLPDALWAYRTAYKTPIGMSPYQLVYGKTCHFP 448
>03_05_0310 + 23008915-23009841,23010401-23011162
Length = 562
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W + +P L R A+K IG S ++VYG+ +LP
Sbjct: 160 WKDRLPDALWAYRTAYKTPIGMSPYQIVYGKPCRLP 195
>11_04_0032 + 12545208-12545954
Length = 248
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 29 QNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
++W +P L R A+K IG S +LVY +T LP
Sbjct: 60 KSWKNKLPDALWAYRTAYKTPIGMSPYQLVYRKTCHLP 97
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 30.7 bits (66), Expect = 0.69
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +2
Query: 20 HSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYSDFL 199
H D +W E +P +L R G + LVYG LPS+ L S A + +D
Sbjct: 1741 HGD-SWIEELPAVLWANRTIPSRATGETPFFLVYGAEAVLPSELTLRSPRATMYCEAD-Q 1798
Query: 200 SRLRR 214
++LRR
Sbjct: 1799 NQLRR 1803
>04_04_1405 - 33305948-33309676,33309749-33310468,33310533-33311439,
33334405-33334484
Length = 1811
Score = 30.7 bits (66), Expect = 0.69
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +2
Query: 20 HSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYSDFL 199
H D +W E +P +L R G + LVYG LPS+ L S A + +D
Sbjct: 1650 HGD-SWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLRSPRATMYCEAD-Q 1707
Query: 200 SRLRR 214
+LRR
Sbjct: 1708 DQLRR 1712
>04_03_0027 + 9667508-9668800
Length = 430
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W +P L R + IG S +LVYG+T LP
Sbjct: 382 WKNKLPNALWAYRTTYNMPIGMSPYQLVYGKTCHLP 417
>06_02_0306 + 14115751-14116450,14116882-14117691,14118957-14119141
Length = 564
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W E + L R +K IG S ++VYG++ +LP
Sbjct: 89 WKEKLSDALWAYRTTYKTPIGMSPYQIVYGKSCRLP 124
>02_03_0058 + 14536336-14536593,14536715-14536984
Length = 175
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W + +P L R A+K IG +VYG++ +LP
Sbjct: 113 WKDRLPDALWAYRTAYKTPIGMFRYHIVYGKSCRLP 148
>07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213
Length = 343
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 140 PSDFFLASSVAEVTDYSDFLSRLRRYMCNLKPTTVTRHG 256
PSDF S+V ++ F R R+Y +++P VT G
Sbjct: 73 PSDFLKTSTVGSEKEWYFFCLRGRKYRNSIRPNRVTGSG 111
>03_05_0186 + 21731294-21732277
Length = 327
Score = 29.1 bits (62), Expect = 2.1
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 15/148 (10%)
Frame = +2
Query: 26 DQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDY-SDFLS 202
D + Y+ +P N+++ + + E +YG + P L E Y +D L
Sbjct: 173 DGSCYKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTP---LLWDQTGERQVYGTDILR 229
Query: 203 RLRRYMCNLKPT---TVTRHGKSNIFVHKDL--QKSSQVFLRTDAL--------KRALQP 343
+ ++ RH + +DL +K V+LR L K L P
Sbjct: 230 EAEEKVKIIQERLRIAQCRHKRYADNRRRDLSFEKGDHVYLRVTPLRGVYRFHTKGKLAP 289
Query: 344 PYTGPYKVIS-RSDKTFQIDIAGKIVTV 424
+ GPYK++S R + +Q+++ + V
Sbjct: 290 RFVGPYKIVSRRGEVAYQLELPQSLAGV 317
>03_01_0330 + 2566662-2566740,2566821-2566911,2567003-2567057,
2567166-2567297,2567517-2567567,2567769-2567840,
2568590-2568680,2568988-2569066,2569147-2569210,
2569917-2570020,2570182-2570287,2572080-2572157,
2572649-2572801,2573039-2573128,2573284-2573349,
2573485-2573583,2573660-2573734,2574455-2574514,
2574909-2574998,2575202-2575323,2575462-2575591,
2575662-2575741,2576167-2576302,2577005-2577086,
2578475-2578620,2578796-2578876,2578994-2579094,
2579770-2580008,2580100-2580209,2580518-2580646,
2580728-2580802,2581455-2581586,2582298-2582470,
2582566-2582688,2582771-2582831,2582910-2583005,
2583251-2583351,2584014-2584119,2584673-2584786,
2584888-2584962,2585619-2585711,2585883-2585954,
2586253-2586338,2586434-2586527,2586596-2586703,
2586782-2587021
Length = 1579
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 179 TDYSDFLSRLRRYMCNLKPTTVTRHGKSNI 268
+DY DF+ L R +C L P V + +S I
Sbjct: 1434 SDYEDFIRDLTRQLCRLSPARVDSYFESAI 1463
>08_02_0360 + 16196712-16197560,16198126-16198875
Length = 532
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W + + L R +K IG S ++VYG++ +LP
Sbjct: 134 WKDRLSDALWAYRTVYKTPIGMSPYQIVYGKSYRLP 169
>05_03_0344 - 12744727-12744837,12745116-12745574
Length = 189
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLP 142
W + L R A+K IG S +LVYG+T P
Sbjct: 5 WKNKLLDALWAYRTAYKTPIGMSPYQLVYGKTCHFP 40
>11_04_0146 - 14091671-14092357,14092996-14093229
Length = 306
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 35 WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKL 139
W + L R A+K IG S +LVYG+T L
Sbjct: 187 WKNKLSDALWAYRTAYKTPIGMSPYQLVYGKTCHL 221
>08_02_0235 + 14627648-14628889
Length = 413
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 323 LKRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 424
+K L P + GPYK++S R + +Q+++ + V
Sbjct: 283 IKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 317
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 424
K L P + GPYK++S R + +Q+++ + V
Sbjct: 452 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 485
>10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834
Length = 324
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 424
K L P + GPYK++S R + +Q+++ + V
Sbjct: 195 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 228
>10_02_0198 - 6611775-6612611
Length = 278
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 424
K L P + GPYK++S R + +Q+++ + V
Sbjct: 149 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 182
>05_06_0064 +
25297268-25297612,25298150-25298237,25299608-25299719,
25300417-25300972
Length = 366
Score = 27.1 bits (57), Expect = 8.5
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +2
Query: 134 KLPSDFFLASSVAE-VTDYSDFLSRLRRYMCNLKPTTVTRHGKSNIFVHKDLQKSSQVFL 310
K S F+L S+ + +TD FL RR+ + + ++F + S FL
Sbjct: 131 KKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSN----SSDFL 186
Query: 311 RTDALKRALQPPYTGPYKVISRSDKTF 391
T + QPPY G S+S + F
Sbjct: 187 GTKFIIYDSQPPYDGAKPSRSQSSRRF 213
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 424
K L P + GPYK++S R + +Q+++ + V
Sbjct: 417 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 450
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 424
K L P + GPYK++S R + +Q+++ + V
Sbjct: 667 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 700
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,359,551
Number of Sequences: 37544
Number of extensions: 218901
Number of successful extensions: 488
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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