Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K15
(502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035077-1|AAH35077.1| 804|Homo sapiens SET and MYND domain con... 30 5.2
AY739714-1|AAW65983.1| 1224|Homo sapiens HECTD1 protein. 30 5.2
AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin r... 30 5.2
AL110222-1|CAB53681.1| 959|Homo sapiens hypothetical protein pr... 30 5.2
AK092149-1|BAC03817.1| 351|Homo sapiens protein ( Homo sapiens ... 30 5.2
AK057769-1|BAB71564.1| 313|Homo sapiens protein ( Homo sapiens ... 30 5.2
AB032957-1|BAA86445.2| 2168|Homo sapiens KIAA1131 protein protein. 30 5.2
Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II pro... 29 9.1
X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II prot... 29 9.1
U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein. 29 9.1
BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for IM... 29 9.1
AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta p... 29 9.1
AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II be... 29 9.1
AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, b... 29 9.1
>BC035077-1|AAH35077.1| 804|Homo sapiens SET and MYND domain
containing 4 protein.
Length = 804
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 155 LASSVAEVTDYSDFLSRLRRYMCNLKPTTVTRHGKSNIFVHKDLQKSSQVFLRTDALKRA 334
LA + A + D+ + L+R +C ++ RHG S++ + +L K +Q+F A+ A
Sbjct: 705 LARACAALGDWQKSATHLQRSLCVVE----VRHGPSSVEMGHELFKLAQIFFNGFAVPEA 760
Query: 335 L 337
L
Sbjct: 761 L 761
>AY739714-1|AAW65983.1| 1224|Homo sapiens HECTD1 protein.
Length = 1224
Score = 29.9 bits (64), Expect = 5.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 269 FVHKDLQKSSQVFLRTDALKRALQPPYTGPYKVISRSDK 385
+V K LQ S +++D L+R +P YT Y+ + SDK
Sbjct: 460 YVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDK 498
>AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin
receptor protein.
Length = 2612
Score = 29.9 bits (64), Expect = 5.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 269 FVHKDLQKSSQVFLRTDALKRALQPPYTGPYKVISRSDK 385
+V K LQ S +++D L+R +P YT Y+ + SDK
Sbjct: 1848 YVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDK 1886
>AL110222-1|CAB53681.1| 959|Homo sapiens hypothetical protein
protein.
Length = 959
Score = 29.9 bits (64), Expect = 5.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 269 FVHKDLQKSSQVFLRTDALKRALQPPYTGPYKVISRSDK 385
+V K LQ S +++D L+R +P YT Y+ + SDK
Sbjct: 195 YVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDK 233
>AK092149-1|BAC03817.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ34830 fis, clone NT2NE2009523, weakly similar to
Homo sapiens HSKM-B (HSKM-B) mRNA. ).
Length = 351
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 155 LASSVAEVTDYSDFLSRLRRYMCNLKPTTVTRHGKSNIFVHKDLQKSSQVFLRTDALKRA 334
LA + A + D+ + L+R +C ++ RHG S++ + +L K +Q+F A+ A
Sbjct: 214 LARACAALGDWQKSATHLQRSLCVVE----VRHGPSSVEMGHELFKLAQIFFNGFAVPEA 269
Query: 335 L 337
L
Sbjct: 270 L 270
>AK057769-1|BAB71564.1| 313|Homo sapiens protein ( Homo sapiens
cDNA FLJ25040 fis, clone CBL03111. ).
Length = 313
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 155 LASSVAEVTDYSDFLSRLRRYMCNLKPTTVTRHGKSNIFVHKDLQKSSQVFLRTDALKRA 334
LA + A + D+ + L+R +C ++ RHG S++ + +L K +Q+F A+ A
Sbjct: 214 LARACAALGDWQKSATHLQRSLCVVE----VRHGPSSVEMGHELFKLAQIFFNGFAVPEA 269
Query: 335 L 337
L
Sbjct: 270 L 270
>AB032957-1|BAA86445.2| 2168|Homo sapiens KIAA1131 protein protein.
Length = 2168
Score = 29.9 bits (64), Expect = 5.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 269 FVHKDLQKSSQVFLRTDALKRALQPPYTGPYKVISRSDK 385
+V K LQ S +++D L+R +P YT Y+ + SDK
Sbjct: 1404 YVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDK 1442
>Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II
protein.
Length = 1031
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 71 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 196
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 737 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 779
>X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II protein.
Length = 1621
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 71 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 196
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 1327 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 1369
>U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein.
Length = 350
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 71 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 196
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 56 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 98
>BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for
IMAGE:4999541) protein.
Length = 485
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 71 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 196
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 191 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 233
>AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta
protein.
Length = 717
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 71 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 196
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 423 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 465
>AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II beta
protein.
Length = 1598
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 71 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 196
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 1304 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 1346
>AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, beta
isozyme variant protein.
Length = 1009
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 71 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 196
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 715 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 757
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,689,362
Number of Sequences: 237096
Number of extensions: 1240535
Number of successful extensions: 2156
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2156
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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