Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K12
         (304 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   0.30 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   2.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   3.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   5.0  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    20   5.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   5.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   5.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   5.0  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 0.30
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 21  GY*SDCKRWWTCCTGLCNQ 77
           G+ + C R+WTC  G   +
Sbjct: 107 GHETSCTRYWTCWNGTATE 125



 Score = 19.8 bits (39), Expect = 6.6
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = +3

Query: 36 CKRWWTCCTG 65
          C R+W C  G
Sbjct: 42 CDRYWECVNG 51


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 85  ISKALIAFYQKYVDEASKKEIKDI 156
           I K +IAFY K +   +  EIK I
Sbjct: 126 IVKPIIAFYYKPIKTLNGHEIKFI 149


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 69  CNQTSHL*SPYRFLPEICRRSI*EGDQRHSSSIRQKF 179
           CN+  HL SP     ++    I E ++R    + Q++
Sbjct: 244 CNKKQHLESPSALQAKVDPLKIPEAEKRKLIHLLQEY 280


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 72  CINLCNMSTTFYSHSNIH 19
           C+N   +++   SHSN++
Sbjct: 268 CVNKSMLNSHMKSHSNVY 285


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
          protein.
          Length = 69

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 72 CINLCNMSTTFYSHSNIH 19
          C+N   +++   SHSN++
Sbjct: 26 CVNKSMLNSHMKSHSNVY 43


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 208 PKKFGGPGARARY 246
           P KF G   RARY
Sbjct: 129 PMKFSGSWKRARY 141


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 96  PYRFLPEICRR 128
           P RFLPE C++
Sbjct: 425 PDRFLPENCQK 435


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 96  PYRFLPEICRR 128
           P RFLPE C++
Sbjct: 425 PDRFLPENCQK 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,669
Number of Sequences: 336
Number of extensions: 1446
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)