Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K12
(304 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47363| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 3e-38
SB_50457| Best HMM Match : Amidase (HMM E-Value=2.6e-36) 35 0.015
SB_228| Best HMM Match : SAM_1 (HMM E-Value=10) 33 0.044
SB_2591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.24
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.24
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 1.7
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 27 2.2
SB_26783| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.1
SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14) 26 5.1
SB_56146| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.1
SB_39407| Best HMM Match : TIG (HMM E-Value=0) 26 5.1
SB_46409| Best HMM Match : EGF_2 (HMM E-Value=0.011) 26 6.7
SB_26220| Best HMM Match : EGF_2 (HMM E-Value=0.011) 26 6.7
SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35) 26 6.7
SB_56942| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_55835| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_40430| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-19) 25 8.9
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 25 8.9
SB_31446| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
>SB_47363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 153 bits (371), Expect = 3e-38
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +1
Query: 10 FSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 189
F GVDIRV VKGGGH +++YAIRQAISK+L+A+YQKYVDE SKKEI+DILVQYDRSLLVA
Sbjct: 24 FEGVDIRVRVKGGGHTSRIYAIRQAISKSLVAYYQKYVDEVSKKEIRDILVQYDRSLLVA 83
Query: 190 DPRRCEPKKFGGPGARARYQKSYR 261
DPRR E KKFGGPGAR+RYQKSYR
Sbjct: 84 DPRRTEAKKFGGPGARSRYQKSYR 107
>SB_50457| Best HMM Match : Amidase (HMM E-Value=2.6e-36)
Length = 391
Score = 34.7 bits (76), Expect = 0.015
Identities = 29/80 (36%), Positives = 37/80 (46%)
Frame = +1
Query: 22 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 201
DI+V V GGG Q AI+ I++ALI F ++K L + + D R
Sbjct: 323 DIKVNVHGGGESGQAGAIKHGITRALIDF---------NADLKPTLSK--AGFVTRDARE 371
Query: 202 CEPKKFGGPGARARYQKSYR 261
E KK G AR R Q S R
Sbjct: 372 VERKKCGLRKARRRKQFSKR 391
>SB_228| Best HMM Match : SAM_1 (HMM E-Value=10)
Length = 119
Score = 33.1 bits (72), Expect = 0.044
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 97 LIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCE 207
++AF QKY+D +KE +Q+ + +LV+ R CE
Sbjct: 53 VLAFRQKYLDNFGRKETSKRFLQFAQGVLVSLARECE 89
>SB_2591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 30.7 bits (66), Expect = 0.24
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 22 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 159
D V GGG Q AIR AIS+AL+ F + ++ E ++EI + L
Sbjct: 390 DASCHVLGGGLTGQAGAIRLAISRALLNFSEDHL-EPLQEEIPESL 434
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +1
Query: 40 KGGGHVAQ--VYAIRQAISKALIAFYQKYV-DEASKKEIKDILVQYDRSLLVADPRRCEP 210
K GGH++Q + I Q K L A + K + DE K++ K+I V+ +RS + ++ EP
Sbjct: 91 KLGGHLSQPKLKKITQVNKKKLRATHHKAILDEIMKEKAKEIDVKKERSTISRRGKKREP 150
Query: 211 K 213
+
Sbjct: 151 E 151
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 5/23 (21%)
Frame = -1
Query: 241 WHGRLDHRISWA-----RNDEGQ 188
WHGRL++R SW+ RND Q
Sbjct: 953 WHGRLNNRYSWSGKPKNRNDRSQ 975
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 104 AIRALEMACLIA*TCATCPPPFTVTLISTPENPR 3
A+ C + C T PPF TL+ P++PR
Sbjct: 16 AVSQAGKVCYSSYGCFTDDPPFDRTLVPLPQSPR 49
>SB_26783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 185 SLTLVVASPRNSVVQAPVPDTR 250
SL LV+ SP + +AP+P+TR
Sbjct: 15 SLLLVLDSPSQGLQRAPLPETR 36
>SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14)
Length = 439
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 128 KHLRRRSKTF*FNTTEVCWSLTLVVASPRNSVVQAPVPDTRNPTVNIISICI 283
KH R + F F TT L+ +P N+ PDT+N T C+
Sbjct: 19 KHHLRTTGNFCF-TTRTTGILSQDTQTPLNNFYNTEYPDTQNTTCTTGDFCL 69
>SB_56146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 26.2 bits (55), Expect = 5.1
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 33 DCKRWWTCCTGLCNQTSH 86
+C+ W + C G+CN+ H
Sbjct: 55 NCQYWGSSCDGVCNRWGH 72
>SB_39407| Best HMM Match : TIG (HMM E-Value=0)
Length = 1710
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 1 ARGFSGVDIRVTVKGGGHVAQVYAIRQAIS 90
+RG +G +R+T+ G G +AI+ I+
Sbjct: 1652 SRGGTGGGVRLTISGSGFTGSTHAIKVTIA 1681
>SB_46409| Best HMM Match : EGF_2 (HMM E-Value=0.011)
Length = 323
Score = 25.8 bits (54), Expect = 6.7
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +1
Query: 4 RGFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDI--LVQYDRS 177
RGF GVD + T K G + IS + +V A + + D ++
Sbjct: 253 RGFEGVDCKNTTKTGTMATMASPMTNCISIIFCTDFDAFVGSADVEFMVDACGMIPAHAH 312
Query: 178 LLVADP 195
L+ DP
Sbjct: 313 LVTTDP 318
>SB_26220| Best HMM Match : EGF_2 (HMM E-Value=0.011)
Length = 353
Score = 25.8 bits (54), Expect = 6.7
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +1
Query: 4 RGFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDI--LVQYDRS 177
RGF GVD + T K G + IS + +V A + + D ++
Sbjct: 264 RGFEGVDCKNTTKTGTMATMASPMTNCISIIFCTDFDAFVGSADVEFMVDACGMIPAHAH 323
Query: 178 LLVADP 195
L+ DP
Sbjct: 324 LVTTDP 329
>SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35)
Length = 1171
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 291 YQTMQIEMILTVGFLVSGTGAWTTEF 214
Y T ++ I T G +V+G+G W +
Sbjct: 367 YSTHRVRFIETRGHVVNGSGLWVASY 392
>SB_56942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 238 HGRLDHRISWARNDEGQRPANFCRIEL 158
HGRL+H WA Q P + +I+L
Sbjct: 30 HGRLNHESVWA--SASQSPGEYIQIDL 54
>SB_55835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 108 ESDKGFRDGLSDCINLCNMSTTFYSHS 28
+ D+ + DG+SD INL ++T + H+
Sbjct: 514 DDDETYTDGISDGINLLWVATHEFGHA 540
>SB_40430| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-19)
Length = 253
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 291 YQTMQIEMILTVGFLVSGTGAWTTEF 214
Y T ++ I T G +V+G+G W +
Sbjct: 118 YSTHRVRYIETQGQIVNGSGLWVASY 143
>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4277
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 271 NDINGRISGIWHGRLDHRISWARNDEGQ 188
N GR++G W R ++R W + D G+
Sbjct: 860 NKKKGRMAGCWAARHNNRKQWLQVDLGK 887
>SB_31446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 112 QKYVDEASKKEIKDILVQYDRSLLVAD 192
Q YV+E + ++KDI+ Y+ ++ AD
Sbjct: 178 QYYVEEILQHQLKDIVTTYEPDVVWAD 204
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,377,837
Number of Sequences: 59808
Number of extensions: 186084
Number of successful extensions: 526
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 364677581
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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