Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K12
(304 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070671-1|AAL48142.1| 148|Drosophila melanogaster RH07540p pro... 167 3e-42
AE013599-3413|AAF46862.1| 148|Drosophila melanogaster CG4046-PA... 167 3e-42
AY089671-1|AAL90409.1| 395|Drosophila melanogaster RH44312p pro... 41 3e-04
AE014297-663|AAF54157.3| 395|Drosophila melanogaster CG2957-PA ... 41 3e-04
AY051695-1|AAK93119.1| 807|Drosophila melanogaster LD24014p pro... 27 3.4
AE014297-325|AAN13257.1| 807|Drosophila melanogaster CG1109-PB,... 27 3.4
AE014297-324|AAF51974.2| 807|Drosophila melanogaster CG1109-PA,... 27 3.4
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA... 27 4.6
X07134-1|CAA30146.1| 349|Drosophila melanogaster protein ( D. m... 27 6.0
X07133-1|CAA30145.1| 304|Drosophila melanogaster protein ( D. m... 27 6.0
X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D. m... 27 6.0
X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D. m... 27 6.0
X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein. 27 6.0
X06184-1|CAA29549.1| 304|Drosophila melanogaster protein ( Dros... 27 6.0
M17211-1|AAA28417.1| 616|Drosophila melanogaster protein ( D.me... 27 6.0
AY118970-1|AAM50830.1| 264|Drosophila melanogaster LD47455p pro... 27 6.0
AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p pro... 27 6.0
AE014298-2648|AAS65396.1| 349|Drosophila melanogaster CG12348-P... 27 6.0
AE014298-2647|AAN09452.1| 304|Drosophila melanogaster CG12348-P... 27 6.0
AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-P... 27 6.0
AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-P... 27 6.0
AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-P... 27 6.0
AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-P... 27 6.0
AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-P... 27 6.0
AE014296-2197|AAF49876.1| 264|Drosophila melanogaster CG10754-P... 27 6.0
AY051784-1|AAK93208.1| 418|Drosophila melanogaster LD30467p pro... 26 8.0
AE014297-803|AAF54280.1| 418|Drosophila melanogaster CG9797-PA ... 26 8.0
>AY070671-1|AAL48142.1| 148|Drosophila melanogaster RH07540p
protein.
Length = 148
Score = 167 bits (405), Expect = 3e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 10 FSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 189
F+GVDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV
Sbjct: 65 FAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVG 124
Query: 190 DPRRCEPKKFGGPGARARYQKSYR 261
DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 125 DPRRCEPKKFGGPGARARYQKSYR 148
>AE013599-3413|AAF46862.1| 148|Drosophila melanogaster CG4046-PA
protein.
Length = 148
Score = 167 bits (405), Expect = 3e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 10 FSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 189
F+GVDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV
Sbjct: 65 FAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVG 124
Query: 190 DPRRCEPKKFGGPGARARYQKSYR 261
DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 125 DPRRCEPKKFGGPGARARYQKSYR 148
>AY089671-1|AAL90409.1| 395|Drosophila melanogaster RH44312p
protein.
Length = 395
Score = 40.7 bits (91), Expect = 3e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +1
Query: 19 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 198
VD+ V+GGG Q AIR I+ +L +F + + E+ + LL D R
Sbjct: 325 VDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMRLA----------GLLTRDYR 374
Query: 199 RCEPKKFGGPGARARY 246
R E KKFG GAR +Y
Sbjct: 375 RRERKKFGQEGARRKY 390
>AE014297-663|AAF54157.3| 395|Drosophila melanogaster CG2957-PA
protein.
Length = 395
Score = 40.7 bits (91), Expect = 3e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +1
Query: 19 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 198
VD+ V+GGG Q AIR I+ +L +F + + E+ + LL D R
Sbjct: 325 VDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMRLA----------GLLTRDYR 374
Query: 199 RCEPKKFGGPGARARY 246
R E KKFG GAR +Y
Sbjct: 375 RRERKKFGQEGARRKY 390
>AY051695-1|AAK93119.1| 807|Drosophila melanogaster LD24014p
protein.
Length = 807
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +1
Query: 106 FYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQ 249
F KY+D +E+ D++ DRS V+ + P ++R++
Sbjct: 605 FLNKYIDAGKLEELNDVVPVRDRSRSVSPTVEARGEMVSPPTKKSRFE 652
>AE014297-325|AAN13257.1| 807|Drosophila melanogaster CG1109-PB,
isoform B protein.
Length = 807
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +1
Query: 106 FYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQ 249
F KY+D +E+ D++ DRS V+ + P ++R++
Sbjct: 605 FLNKYIDAGKLEELNDVVPVRDRSRSVSPTVEARGEMVSPPTKKSRFE 652
>AE014297-324|AAF51974.2| 807|Drosophila melanogaster CG1109-PA,
isoform A protein.
Length = 807
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +1
Query: 106 FYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQ 249
F KY+D +E+ D++ DRS V+ + P ++R++
Sbjct: 605 FLNKYIDAGKLEELNDVVPVRDRSRSVSPTVEARGEMVSPPTKKSRFE 652
>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
protein.
Length = 1734
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 163 QYDRSLLVADPRRCEPKKFGGPGARARYQK 252
++D+ LLVA P C PKK P + Q+
Sbjct: 233 RFDQRLLVAIPPNCPPKKQNKPQQNKQQQQ 262
>X07134-1|CAA30146.1| 349|Drosophila melanogaster protein ( D.
melanogaster larvalShaker ShE mRNA for put.
K(+)-channel. ).
Length = 349
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 272 VPDITDPFFLIETLCIIWFTFEL 294
>X07133-1|CAA30145.1| 304|Drosophila melanogaster protein ( D.
melanogaster larvalShaker mRNA for put. K(+)-channel. ).
Length = 304
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 227 VPDITDPFFLIETLCIIWFTFEL 249
>X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D.
melanogaster (latepopul.) Shaker ShB mRNA for put.
K(+)-channel.).
Length = 643
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 260 VPDITDPFFLIETLCIIWFTFEL 282
>X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D.
melanogaster adultShaker ShA mRNA for put. K(+)-channel.
).
Length = 616
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 272 VPDITDPFFLIETLCIIWFTFEL 294
>X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein.
Length = 656
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 272 VPDITDPFFLIETLCIIWFTFEL 294
>X06184-1|CAA29549.1| 304|Drosophila melanogaster protein (
Drosophila mRNA forShaker (Sh) protein. ).
Length = 304
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 227 VPDITDPFFLIETLCIIWFTFEL 249
>M17211-1|AAA28417.1| 616|Drosophila melanogaster protein (
D.melanogaster potassiumchannel (Shaker) mRNA, complete
cds. ).
Length = 616
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 272 VPDITDPFFLIETLCIIWFTFEL 294
>AY118970-1|AAM50830.1| 264|Drosophila melanogaster LD47455p
protein.
Length = 264
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 112 QKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF---GGPGARARYQK 252
+K+ D +++ K+ + SLL + R EPKKF G PG R Q+
Sbjct: 76 KKHQDNLARRAAKEAK-EAPSSLLAPEKPRVEPKKFVKIGRPGYRVTKQR 124
>AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p
protein.
Length = 571
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 227 VPDITDPFFLIETLCIIWFTFEL 249
>AE014298-2648|AAS65396.1| 349|Drosophila melanogaster CG12348-PF,
isoform F protein.
Length = 349
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 272 VPDITDPFFLIETLCIIWFTFEL 294
>AE014298-2647|AAN09452.1| 304|Drosophila melanogaster CG12348-PA,
isoform A protein.
Length = 304
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 227 VPDITDPFFLIETLCIIWFTFEL 249
>AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-PE,
isoform E protein.
Length = 655
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 272 VPDITDPFFLIETLCIIWFTFEL 294
>AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-PC,
isoform C protein.
Length = 643
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 260 VPDITDPFFLIETLCIIWFTFEL 282
>AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-PG,
isoform G protein.
Length = 616
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 272 VPDITDPFFLIETLCIIWFTFEL 294
>AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-PB,
isoform B protein.
Length = 616
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 272 VPDITDPFFLIETLCIIWFTFEL 294
>AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-PD,
isoform D protein.
Length = 571
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 236 VPDTRNPTVNIISICIVWYRLDL 304
VPD +P I ++CI+W+ +L
Sbjct: 227 VPDITDPFFLIETLCIIWFTFEL 249
>AE014296-2197|AAF49876.1| 264|Drosophila melanogaster CG10754-PA
protein.
Length = 264
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 112 QKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF---GGPGARARYQK 252
+K+ D +++ K+ + SLL + R EPKKF G PG R Q+
Sbjct: 76 KKHQDNLARRAAKEAK-EAPSSLLAPEKPRVEPKKFVKIGRPGYRVTKQR 124
>AY051784-1|AAK93208.1| 418|Drosophila melanogaster LD30467p
protein.
Length = 418
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 64 VYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 177
V ++ + A YQ+ V E K+EI D V+YD +
Sbjct: 109 VQTVKTPDDDEVYATYQEIVLEEPKEEIDDTKVEYDNT 146
>AE014297-803|AAF54280.1| 418|Drosophila melanogaster CG9797-PA
protein.
Length = 418
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 64 VYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 177
V ++ + A YQ+ V E K+EI D V+YD +
Sbjct: 109 VQTVKTPDDDEVYATYQEIVLEEPKEEIDDTKVEYDNT 146
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,050,173
Number of Sequences: 53049
Number of extensions: 282069
Number of successful extensions: 717
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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