Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K11
         (364 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.18 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   9.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   9.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   9.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.18
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -3

Query: 146 SNIAIHSIRHKASQYSLAIKLRRTFIF 66
           SN+++HS+++K S  SL + +  + +F
Sbjct: 22  SNVSLHSLKNKRSGASLQVGILDSLVF 48


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 120 AQGITIFSRDQVTKNI 73
           ++G T+F   Q+ KN+
Sbjct: 79  SKGTTLFMTSQIKKNV 94


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 120 AQGITIFSRDQVTKNI 73
           ++G T+F   Q+ KN+
Sbjct: 79  SKGTTLFMTSQIKKNV 94


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 87  LDRERIL*CLVPY*MYCNIALFLL 158
           L + +    LV   +YC++A+F+L
Sbjct: 400 LSKTKTFCTLVTALVYCSLAIFVL 423


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,743
Number of Sequences: 336
Number of extensions: 1372
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)