Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K10
(424 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 29 1.0
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 29 1.0
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 29 1.0
Z48809-4|CAB76413.2| 332|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 29 1.8
Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical pr... 26 9.7
X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein. 26 9.7
X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein. 26 9.7
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 422 HYNANVKFRAQMPRITRKSAYKHNVKTIDVFFRKK*EYILHKVFLEL 282
H N +K R ++ ++ R+ Y H V TID K + ++ VF +L
Sbjct: 398 HLNRQLK-RQKISKLEREKIYNHLVPTIDYSAMKNADVVIEAVFEDL 443
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 422 HYNANVKFRAQMPRITRKSAYKHNVKTIDVFFRKK*EYILHKVFLELK*LIKMI 261
H N VK R ++ ++ ++ Y H V TID K + ++ VF +L+ K+I
Sbjct: 424 HLNKQVK-RRKINKLEKERIYNHLVPTIDYSAMKNADVVIEAVFEDLQLKHKVI 476
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 422 HYNANVKFRAQMPRITRKSAYKHNVKTIDVFFRKK*EYILHKVFLELK*LIKMI 261
H N VK R ++ ++ ++ Y H V TID K + ++ VF +L+ K+I
Sbjct: 398 HLNKQVK-RRKINKLEKERIYNHLVPTIDYSAMKNADVVIEAVFEDLQLKHKVI 450
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 422 HYNANVKFRAQMPRITRKSAYKHNVKTIDVFFRKK*EYILHKVFLELK*LIKMI 261
H N VK R ++ ++ ++ Y H V TID K + ++ VF +L+ K+I
Sbjct: 424 HLNKQVK-RRKINKLEKERIYNHLVPTIDYSAMKNADVVIEAVFEDLQLKHKVI 476
>Z48809-4|CAB76413.2| 332|Caenorhabditis elegans Hypothetical
protein T01E8.7 protein.
Length = 332
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 230 FNHKPRYARISVNAIFFGMYPSRKAGYYCTIV*IDSKVNL*KYILVILNFNF 75
F H P++ +IS++ I P G YC + +++NL K LVI N +F
Sbjct: 10 FFHSPKFLQISLHIISAVGIPIYIFGGYCILCKTPNQMNLVK--LVIFNLHF 59
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +2
Query: 239 KFNTKKYKSF*SITLILRTLYAIYTLIFYGKIHLLSLHYVYTHSF 373
KF+ +Y S+ + +++ TLYAIY+ I ++ +L + V+ +++
Sbjct: 32 KFSRPEYGSYKLLMMVMATLYAIYSAI---EVIILPSYLVFEYNY 73
>Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical
protein C46F11.1b protein.
Length = 700
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 266 MICIFLY*ILTMFNHKPRYARISVNAIFFGMYPSRKAGYYCTIV 135
+I IF+Y + + N +P Y+ + +IF G+ S G C +
Sbjct: 307 LIAIFVYFLYIVINLRPTYSSMIPASIFCGIAASCIWGAKCAYI 350
>Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical
protein C46F11.1a protein.
Length = 705
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 266 MICIFLY*ILTMFNHKPRYARISVNAIFFGMYPSRKAGYYCTIV 135
+I IF+Y + + N +P Y+ + +IF G+ S G C +
Sbjct: 312 LIAIFVYFLYIVINLRPTYSSMIPASIFCGIAASCIWGAKCAYI 355
>X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein.
Length = 700
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 266 MICIFLY*ILTMFNHKPRYARISVNAIFFGMYPSRKAGYYCTIV 135
+I IF+Y + + N +P Y+ + +IF G+ S G C +
Sbjct: 307 LIAIFVYFLYIVINLRPTYSSMIPASIFCGIAASCIWGAKCAYI 350
>X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein.
Length = 705
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 266 MICIFLY*ILTMFNHKPRYARISVNAIFFGMYPSRKAGYYCTIV 135
+I IF+Y + + N +P Y+ + +IF G+ S G C +
Sbjct: 312 LIAIFVYFLYIVINLRPTYSSMIPASIFCGIAASCIWGAKCAYI 355
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,002,948
Number of Sequences: 27780
Number of extensions: 144118
Number of successful extensions: 356
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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