Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K09
         (465 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O80707 Cluster: F8K4.22; n=16; Arabidopsis thaliana|Rep...    37   0.19 
UniRef50_Q9HS44 Cluster: Dihydropteroate synthase; n=4; Halobact...    36   0.33 
UniRef50_UPI0000DB6E21 Cluster: PREDICTED: similar to folylpolyg...    34   1.3  
UniRef50_Q58632 Cluster: Ribulose bisphosphate carboxylase; n=8;...    34   1.8  
UniRef50_UPI0000E4A2B9 Cluster: PREDICTED: similar to Folylpolyg...    32   5.4  
UniRef50_Q5V5Y3 Cluster: Dihydropteroate synthase; n=1; Haloarcu...    32   5.4  
UniRef50_Q96B33 Cluster: Claudin-23; n=16; Amniota|Rep: Claudin-...    32   5.4  
UniRef50_UPI000065F917 Cluster: Equilibrative nucleoside transpo...    32   7.1  
UniRef50_A0CUL4 Cluster: Chromosome undetermined scaffold_28, wh...    32   7.1  
UniRef50_A5MTS9 Cluster: Lantibiotic mersacidin modifying enzyme...    31   9.4  
UniRef50_A2U5U6 Cluster: Rhomboid-like protein; n=1; Bacillus co...    31   9.4  
UniRef50_Q7R3N4 Cluster: GLP_39_56745_40507; n=1; Giardia lambli...    31   9.4  
UniRef50_A5AB43 Cluster: Contig An08c0230, complete genome. prec...    31   9.4  

>UniRef50_O80707 Cluster: F8K4.22; n=16; Arabidopsis thaliana|Rep:
           F8K4.22 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 743

 Score = 37.1 bits (82), Expect = 0.19
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -3

Query: 379 FSCNSTVCSILHAIM*FISIFICP-CFLFASKRAPVVPRGTRLSDMLLNLLVNISLFQGM 203
           F+C+  +CS+ H    F   +ICP C   A +R   +PR  R+S     +  N S  QG 
Sbjct: 296 FACS--LCSLTHTSCPF---YICPPCDFVAHQRCISLPRVIRISRHPHRISFNHSFGQGD 350

Query: 202 WMCCNLVLQSVDTEI*AY 149
           W CC +  + +D +   Y
Sbjct: 351 WSCC-VCRRKIDNDYGGY 367


>UniRef50_Q9HS44 Cluster: Dihydropteroate synthase; n=4;
           Halobacteriaceae|Rep: Dihydropteroate synthase -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 815

 Score = 36.3 bits (80), Expect = 0.33
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 335 HNGVKNGTNGAVAREMMNLPHETI-EGLRSCKWPGRYQVMDA 457
           H     G   A+AR+   +  + I  GLRS  WPGR++VM A
Sbjct: 259 HQAENAGVAAALARQTAGVDDDAIARGLRSAHWPGRFEVMGA 300


>UniRef50_UPI0000DB6E21 Cluster: PREDICTED: similar to
           folylpolyglutamate synthase; n=1; Apis mellifera|Rep:
           PREDICTED: similar to folylpolyglutamate synthase - Apis
           mellifera
          Length = 440

 Score = 34.3 bits (75), Expect = 1.3
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +1

Query: 136 LYMINK--LKFQCPLTEVPNYNTSTFPEIKKYLPVNLEAYQTNASLAVQLAHAWMR 297
           +Y++ K  ++  C L  VP ++   +  I   L +  +  Q NASLA+Q+A  W++
Sbjct: 235 MYILEKRAIEKNCKLHIVPTFDEYKWENISPTLQITNKVQQQNASLAIQMAIEWIQ 290


>UniRef50_Q58632 Cluster: Ribulose bisphosphate carboxylase; n=8;
           Archaea|Rep: Ribulose bisphosphate carboxylase -
           Methanococcus jannaschii
          Length = 425

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 440 ISPAICKTSSLLSFREEDSSFLLQQHRLFHSS 345
           I   +C  S++ SFREED  F++  HR  H++
Sbjct: 244 IDVVVCGFSAVQSFREEDFKFIIHAHRAMHAA 275


>UniRef50_UPI0000E4A2B9 Cluster: PREDICTED: similar to
           Folylpolyglutamate synthase; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to Folylpolyglutamate
           synthase - Strongylocentrotus purpuratus
          Length = 647

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 356 TNGAVAREMMNLPHETIEGLRSCKWPGRYQVM 451
           T      +   +P + I+GL SC WPGR Q++
Sbjct: 357 TGDVTEAQPFTVPKQFIKGLTSCYWPGRNQII 388


>UniRef50_Q5V5Y3 Cluster: Dihydropteroate synthase; n=1; Haloarcula
           marismortui|Rep: Dihydropteroate synthase - Haloarcula
           marismortui (Halobacterium marismortui)
          Length = 799

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 335 HNGVKNGTNGAVAREMMNLPHETI-EGLRSCKWPGRYQV 448
           H     G    +AR+++++  ETI EGLR+   PGR++V
Sbjct: 255 HQAENAGVAATLARQLIDVDTETISEGLRAATLPGRFEV 293


>UniRef50_Q96B33 Cluster: Claudin-23; n=16; Amniota|Rep: Claudin-23
           - Homo sapiens (Human)
          Length = 292

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -3

Query: 328 ISIFICPCFLFASKRAPVVPRGTRLSDMLLNLLVNISLFQGMWMCC 191
           + + + PC L  +    + P G RL    LN  V++ L+QG+W  C
Sbjct: 9   LGMVLAPCGLLLNLTGTLAP-GWRLVKGFLNQPVDVELYQGLWDMC 53


>UniRef50_UPI000065F917 Cluster: Equilibrative nucleoside
           transporter 1 (Equilibrative nitrobenzylmercaptopurine
           riboside-sensitive nucleoside transporter)
           (Equilibrative NBMPR-sensitive nucleoside transporter)
           (Nucleoside transporter, es-type) (Solute carrier family
           29 member 1).; n=3; Deuterostomia|Rep: Equilibrative
           nucleoside transporter 1 (Equilibrative
           nitrobenzylmercaptopurine riboside-sensitive nucleoside
           transporter) (Equilibrative NBMPR-sensitive nucleoside
           transporter) (Nucleoside transporter, es-type) (Solute
           carrier family 29 member 1). - Takifugu rubripes
          Length = 415

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -1

Query: 417 LKPSIVS*GRFIISLATAPFVPFFTPLCNLYPFLYVLVFYSH 292
           ++P I S    ++  A   FVP F  LCN+ P  Y+ VF+SH
Sbjct: 311 MRPGIDSIWLPVLVAARLVFVPLFM-LCNVQPRYYLPVFFSH 351


>UniRef50_A0CUL4 Cluster: Chromosome undetermined scaffold_28, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_28,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 755

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 154 LKFQCPLTEVPNYNTSTFPEIKKYLPVNLEAYQTNASLAVQLAHAWMR 297
           LK + P  ++P +  ST+ E KK L ++++ Y T+  L  Q   A+ +
Sbjct: 52  LKVRQPHQQIPYFYISTYEECKKELTLSIDNYTTSFELPKQYPFAYTK 99


>UniRef50_A5MTS9 Cluster: Lantibiotic mersacidin modifying enzyme;
           n=1; Streptococcus pneumoniae SP23-BS72|Rep: Lantibiotic
           mersacidin modifying enzyme - Streptococcus pneumoniae
           SP23-BS72
          Length = 236

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 390 RFIISLATAPFVPFFTPLCNLYPFLYVLVFYSHPSVRQLYREGRVCLI 247
           R+ + L T   VPFF  +   YP L++ +F+ H     L  E  + +I
Sbjct: 96  RYCLKLGT---VPFFKKIKKAYPVLFIKIFHLHQHTINLIEEAMLSII 140


>UniRef50_A2U5U6 Cluster: Rhomboid-like protein; n=1; Bacillus
           coagulans 36D1|Rep: Rhomboid-like protein - Bacillus
           coagulans 36D1
          Length = 199

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -3

Query: 325 SIFICPCFLFASKRAPVVPRGTRLSDMLLNLLVNISLFQG-MWMCCNLVLQSVD 167
           +IF+  C LFA+ R PV+P  T L + L    VN+ + QG +W   + V   +D
Sbjct: 20  AIFLAQCLLFAAMRLPVLPTQT-LYETLSG--VNLYIAQGEIWRLVSPVFVHID 70


>UniRef50_Q7R3N4 Cluster: GLP_39_56745_40507; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_39_56745_40507 - Giardia lamblia
           ATCC 50803
          Length = 5412

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -2

Query: 455 RPLLDISPAICKTSSLLSFREEDSSFLLQQHRLFHSSRH-YVIYIHFYMSLFFIRI 291
           R L DI P+   +  +    + +SS L +      S +  Y+ ++HFYM+  FIR+
Sbjct: 351 RSLTDILPSALASWQVFRQLDANSSNLKEMQAFSASEKSVYIHFVHFYMTYHFIRL 406


>UniRef50_A5AB43 Cluster: Contig An08c0230, complete genome.
           precursor; n=1; Aspergillus niger|Rep: Contig An08c0230,
           complete genome. precursor - Aspergillus niger
          Length = 674

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -3

Query: 370 NSTVCSILHAIM*FISIFICPCFLFASKRAPVVPRGTRLSDMLLNLLVNISL-FQGMW 200
           N+ + ++    + F  IFI   F++A   +  +P GT +S + L LLV + L + G W
Sbjct: 441 NTLITALFFPGLAFSLIFILNLFVWAQASSTAIPFGTLVSLLALWLLVQVPLVYAGSW 498


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,723,201
Number of Sequences: 1657284
Number of extensions: 8639421
Number of successful extensions: 19421
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19412
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)