Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K09
         (465 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125149-1|AAI25150.1|  292|Homo sapiens claudin 23 protein.           32   0.85 
BC125148-1|AAI25149.1|  292|Homo sapiens claudin 23 protein.           32   0.85 

>BC125149-1|AAI25150.1|  292|Homo sapiens claudin 23 protein.
          Length = 292

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -3

Query: 328 ISIFICPCFLFASKRAPVVPRGTRLSDMLLNLLVNISLFQGMWMCC 191
           + + + PC L  +    + P G RL    LN  V++ L+QG+W  C
Sbjct: 9   LGMVLAPCGLLLNLTGTLAP-GWRLVKGFLNQPVDVELYQGLWDMC 53


>BC125148-1|AAI25149.1|  292|Homo sapiens claudin 23 protein.
          Length = 292

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -3

Query: 328 ISIFICPCFLFASKRAPVVPRGTRLSDMLLNLLVNISLFQGMWMCC 191
           + + + PC L  +    + P G RL    LN  V++ L+QG+W  C
Sbjct: 9   LGMVLAPCGLLLNLTGTLAP-GWRLVKGFLNQPVDVELYQGLWDMC 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,153,911
Number of Sequences: 237096
Number of extensions: 1221132
Number of successful extensions: 2179
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2179
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)