Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K08
(350 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 198 2e-50
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 167 6e-41
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 155 3e-37
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 138 2e-32
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 124 3e-28
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 117 5e-26
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 111 2e-24
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 108 2e-23
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 104 4e-22
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 104 5e-22
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 103 6e-22
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 103 8e-22
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 101 4e-21
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 100 6e-21
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 92 2e-18
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 89 3e-17
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 73 1e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 71 7e-12
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 64 5e-10
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 64 6e-10
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 64 6e-10
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 64 8e-10
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 63 1e-09
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 60 8e-09
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 60 1e-08
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 59 2e-08
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 58 4e-08
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 56 2e-07
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 53 2e-06
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 49 2e-05
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 48 6e-05
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 38 0.047
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 36 0.25
UniRef50_UPI00005E1AE6 Cluster: putative non-structural protein ... 33 1.8
UniRef50_Q01CR9 Cluster: Chromosome 03 contig 1, DNA sequence; n... 32 3.1
UniRef50_A5B5Z1 Cluster: Putative uncharacterized protein; n=1; ... 32 3.1
UniRef50_Q4QFI9 Cluster: Putative uncharacterized protein; n=3; ... 32 3.1
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 32 3.1
UniRef50_Q8N2J0 Cluster: CDNA FLJ90562 fis, clone OVARC1001163; ... 32 3.1
UniRef50_UPI00015B54C6 Cluster: PREDICTED: similar to GA16823-PA... 31 4.1
UniRef50_Q8NMK2 Cluster: Phosphate uptake regulator; n=4; Coryne... 31 4.1
UniRef50_Q6FCW9 Cluster: High-affinity phosphate transport prote... 31 5.4
UniRef50_Q4AGF6 Cluster: TPR repeat:TPR repeat; n=1; Chlorobium ... 31 5.4
UniRef50_Q6KA75 Cluster: Peroxisomal membrane protein-like; n=3;... 31 5.4
UniRef50_A3GEV8 Cluster: Predicted protein; n=2; Pichia stipitis... 31 5.4
UniRef50_Q7UID6 Cluster: Similar to hexosyltransferase; n=1; Pir... 31 7.2
UniRef50_A7K1T2 Cluster: KAP family P-loop domain protein; n=2; ... 31 7.2
UniRef50_Q16IY0 Cluster: Smaug protein; n=2; Aedes aegypti|Rep: ... 31 7.2
UniRef50_Q9P8A1 Cluster: Cytochrome P450; n=2; Agaricus bisporus... 31 7.2
UniRef50_Q0UDD4 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_A5DW46 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_Q28QX7 Cluster: Reductive dehalogenase; n=4; Rhodobacte... 30 9.5
UniRef50_Q6UVT8 Cluster: Ribosomal protein L5; n=1; Pseudendoclo... 30 9.5
UniRef50_A5AI49 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_Q6WKZ4 Cluster: Rab11 family-interacting protein 1; n=2... 30 9.5
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 198 bits (484), Expect = 2e-50
Identities = 90/113 (79%), Positives = 100/113 (88%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
VLKVYKSQRLRAGKGKMRNRRR+ RKGPLIIYNKD+GLTR+FRNIPG++M
Sbjct: 45 VLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLH 104
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGGH+GRF+IWT+SAF+RLD +FGSWKTPSKEKKNFNLPQPKMANTDLSRL
Sbjct: 105 LAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRL 157
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 167 bits (405), Expect = 6e-41
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIPGIE
Sbjct: 183 IQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLK 242
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGGH+GRF+IWT+SAF RL+ LFG+WK PS KK +NLPQPKMANTDLSRL
Sbjct: 243 LAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRL 295
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 155 bits (375), Expect = 3e-37
Identities = 68/113 (60%), Positives = 85/113 (75%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDLSR+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRI 292
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 138 bits (334), Expect = 2e-32
Identities = 63/111 (56%), Positives = 82/111 (73%)
Frame = +1
Query: 16 KVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXA 195
KV S+ +R+GKGKMRNRR VQR+GPL++Y++D G+TRAFRNIPG+E+ A
Sbjct: 185 KVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRLGLLTLA 244
Query: 196 PGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
PGGH+GRFIIWTKSAF++LD +FG+ + S KK + P MA TDL+RL
Sbjct: 245 PGGHVGRFIIWTKSAFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRL 295
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 124 bits (300), Expect = 3e-28
Identities = 61/114 (53%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Frame = +1
Query: 16 KVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKD---KGLTRAFRNIPGIEMXXXXXXXXX 186
K S++LRAGKGK+R RR QR+GPL+IYN D K L +AFRNIPG+E
Sbjct: 161 KAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETSSVYSMNLL 220
Query: 187 XXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGGHLGRFI+WT SAF LD ++GS PS KK+F LP M DLS++
Sbjct: 221 QLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKI 274
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 117 bits (282), Expect = 5e-26
Identities = 58/118 (49%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Frame = +1
Query: 4 RGVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYN---KDKGLTRAFRNIPGIEMXXXXX 174
+ V KV S++LRAGKGK+R RR QR+GPL++Y+ K L RAFRN+PG+E
Sbjct: 180 KDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVETCDVYS 239
Query: 175 XXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGGHLGRFIIW+ SAF LD ++G+ PS KK+F LP ++ D+ RL
Sbjct: 240 LNLLQLAPGGHLGRFIIWSSSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRL 297
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 111 bits (268), Expect = 2e-24
Identities = 51/108 (47%), Positives = 73/108 (67%)
Frame = +1
Query: 25 KSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXAPGG 204
+S+R+R G GK RNRR QR+G LI++++++GL AFRNI G+++ APGG
Sbjct: 185 ESKRIRVGSGKARNRRYTQRRGVLIVHDQNEGLANAFRNISGVDISNVXRLNIRDLAPGG 244
Query: 205 HLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
HLGRFIIWT+ A+ +LD L+G+ + K + P P + NTDLSR+
Sbjct: 245 HLGRFIIWTEGAYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRI 292
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 108 bits (260), Expect = 2e-23
Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIY-NKDKGLTRAFRNIPGIEMXXXXXXXXX 186
VLKV S+ +RAG+GKMR R+ +RKGPL++Y N D +AFRNIPG++
Sbjct: 181 VLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVL 240
Query: 187 XXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APG H+GRFIIWT+SAF +L+ +FG+ K ++ K F + +MA D+ R+
Sbjct: 241 NLAPGCHIGRFIIWTESAFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRV 294
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 104 bits (250), Expect = 4e-22
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIY-NKDKGLTRAFRNIPGIEMXXXXXXXXX 186
V KV ++ +RAG K R ++ RKGPL++Y N++ L +AFRN+PG+E+
Sbjct: 27 VQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLL 86
Query: 187 XXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGG LGRF+IWT+SAF LD LFG+++ S K + L +P + N DL+R+
Sbjct: 87 QLAPGGQLGRFVIWTQSAFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARI 140
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 104 bits (249), Expect = 5e-22
Identities = 49/113 (43%), Positives = 70/113 (61%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
V ++ KS +LRA GKMRNR+ GPLIIY+ D G+ +AFRNIPG+++
Sbjct: 180 VNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLLK 239
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGG +GR IW++ AF +LD ++G KKN+ LP+P + N D+ R+
Sbjct: 240 LAPGGSIGRLCIWSEDAFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRI 292
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 103 bits (248), Expect = 6e-22
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIY-NKDKGLTRAFRNIPGIEMXXXXXXXXX 186
V KV ++ +RAG K R ++ RKGPL++Y N++ L +AFRN+PG+E+
Sbjct: 181 VQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLL 240
Query: 187 XXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGG LGRF+IWT+SAF LD LFG+++ S K + L +P + N DL+R+
Sbjct: 241 QLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARI 294
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 103 bits (247), Expect = 8e-22
Identities = 47/111 (42%), Positives = 66/111 (59%)
Frame = +1
Query: 16 KVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXA 195
++ S +R GKGKMRNRRRV GPL++Y +D G+ +A RNI G++ A
Sbjct: 185 RIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLLRLA 244
Query: 196 PGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
PGG GR I+TK A RL ++GS+ S K + LP+P M N D++R+
Sbjct: 245 PGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRI 295
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 101 bits (241), Expect = 4e-21
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +1
Query: 16 KVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKG-LTRAFRNIPGIEMXXXXXXXXXXX 192
K S + GKGKMRNRR + RKGPLI+Y + L +AFRNIPG+E+
Sbjct: 45 KAKDSHAIHPGKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKL 104
Query: 193 APGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKK 297
APGGHLGRF+IWTKS+F++LD ++ S++ + ++
Sbjct: 105 APGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRR 139
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 100 bits (240), Expect = 6e-21
Identities = 49/115 (42%), Positives = 71/115 (61%)
Frame = +1
Query: 4 RGVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXX 183
R V + S+ +RAG+GKMRNRR + RKGPL+IYN + + R FRN+PG+++
Sbjct: 166 RDVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRL 224
Query: 184 XXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APG H GR I+WTKSAF LD ++ + K+N+ LP+ + TD+ R+
Sbjct: 225 LELAPGSHPGRLILWTKSAFASLDDVYAA-------KQNYTLPRSCITQTDIERI 272
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 92.3 bits (219), Expect = 2e-18
Identities = 47/111 (42%), Positives = 65/111 (58%)
Frame = +1
Query: 16 KVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXA 195
+V KS+ +R GKGKMRNRR QRKG LI++ + + FRNI G++ A
Sbjct: 179 RVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQMSIDSLDLLELA 237
Query: 196 PGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
PGG GR IIWT+SAF++LD +FG + ++ F LP + + DL L
Sbjct: 238 PGGVAGRLIIWTESAFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEEL 288
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 88.6 bits (210), Expect = 3e-17
Identities = 43/100 (43%), Positives = 58/100 (58%)
Frame = +1
Query: 40 RAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXAPGGHLGRF 219
R+ KGK R +KGPL+IYN+DKG+ +AFRNIPG+E AP +GR
Sbjct: 187 RSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRL 246
Query: 220 IIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDL 339
+WT+SAF LD ++ S KK F+LP+ M N D+
Sbjct: 247 TVWTESAFKALDGIYES-------KKRFSLPRSIMTNADI 279
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 72.9 bits (171), Expect = 1e-12
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
V + + +R RAG+GKMR RR V++K L++ KD G+ +A +N+PG++
Sbjct: 167 VERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLNVEL 226
Query: 190 XAPGGHLGRFIIWTKSAFDRL 252
APG H GR +WTKSA + L
Sbjct: 227 LAPGCHPGRLTVWTKSAVEYL 247
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 70.5 bits (165), Expect = 7e-12
Identities = 30/85 (35%), Positives = 51/85 (60%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
+++ K +++++GKGK+R R+ KGPL++ D+G++ RN G+++
Sbjct: 170 IVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAEL 229
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLF 264
APG H GR I+TKSA ++L LF
Sbjct: 230 LAPGTHAGRLTIYTKSAIEKLGDLF 254
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 64.5 bits (150), Expect = 5e-10
Identities = 46/113 (40%), Positives = 58/113 (51%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
+ KVY SQR+RAGKGKMRNRR +QR+G IIYN+D G+ +A +E
Sbjct: 121 IKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNGIIKASET--SLESLYLIAFCKLD 178
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
G W K+A S K+ N+NLP KM NTDLSR+
Sbjct: 179 DLYG-------TWPKAA---------SLKS------NYNLPMHKMLNTDLSRI 209
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 64.1 bits (149), Expect = 6e-10
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 31 QRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXAPGGHL 210
++L++GKGKMRNRR + GPL+++ K ++ RNI I+ APGGHL
Sbjct: 181 RKLKSGKGKMRNRRFKKPTGPLLVF---KNNLKSLRNIANIDCMKISALNLTKLAPGGHL 237
Query: 211 GRFIIWTKSAFDRLDPL 261
GR IW+ AF L+ +
Sbjct: 238 GRLCIWSSKAFQMLNTI 254
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 64.1 bits (149), Expect = 6e-10
Identities = 31/86 (36%), Positives = 48/86 (55%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
V + ++R+RAGKGK R RR V+ K LI+ ++D+G+ RN PG+++
Sbjct: 174 VERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLGVEH 233
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFG 267
APG H GR ++T A + L+ G
Sbjct: 234 LAPGAHPGRLTVFTPGALEVLEERLG 259
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 63.7 bits (148), Expect = 8e-10
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +1
Query: 37 LRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXAPGGHLGR 216
+RAGKG MR R+ K L++ ++ GL +A RNIPG+++ APGG GR
Sbjct: 232 IRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSAEDLAPGGDAGR 291
Query: 217 FIIWTKSAFDRLD 255
+WTK+A L+
Sbjct: 292 LTVWTKAAIGALE 304
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
V +V S+ +RAG+GKMRNRR V R+GP+++ +KG TRAFRNI G+++
Sbjct: 179 VNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALTLLH 237
Query: 190 XAPGG 204
APGG
Sbjct: 238 LAPGG 242
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 60.5 bits (140), Expect = 8e-09
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 16 KVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNK-DKGLTRAFRNIPGIEMXXXXXXXXXXX 192
+VY+ +R RAGKGK R R ++RKGPLI+ N ++ L +A NIPG+++
Sbjct: 183 RVYEIKR-RAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNVELL 241
Query: 193 APGGHLGRFIIWTKSAFDRL 252
APG GR +I +K A + L
Sbjct: 242 APGAKPGRLLIISKDALETL 261
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 60.1 bits (139), Expect = 1e-08
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLII-YNKDKGLTRAFRNIPGIEMXXXXXXXXX 186
V +V + R+RAGKGKMR R+ + GPLII ++ + + +A RN+ G+++
Sbjct: 176 VERVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVVNAKDVSVI 235
Query: 187 XXAPGGHLGRFIIWTKSAFDRLD 255
APG H GR I+T+S+ LD
Sbjct: 236 HLAPGAHPGRLTIYTESSIKILD 258
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +1
Query: 31 QRLRAGKGKMRNRRRVQRKGPLIIYNKD--KGLTRAFRNIPGIEMXXXXXXXXXXXAPGG 204
+R+ G+ R+ R+ + GPLII +G RAFRNIPG+E+ AP G
Sbjct: 180 KRIDKVTGRARDGRKKRPVGPLIILRATAVEG-KRAFRNIPGVEVACVERLNLLKLAPAG 238
Query: 205 HLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNL 309
LGR +W+KSAF+ LD P+K KN +L
Sbjct: 239 ALGRLCVWSKSAFEALDDYIK--MMPTKLLKNADL 271
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 58.0 bits (134), Expect = 4e-08
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 RLRAGKGKMRNRRRVQRKGPLIIYNK-DKGLTRAFRNIPGIEMXXXXXXXXXXXAPGGHL 210
++RAGKGKMR RR + K L++ + + L A RN PG+++ APGG
Sbjct: 205 KIRAGKGKMRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAVNNLNILVLAPGGVP 264
Query: 211 GRFIIWTKSAFDRLDPLF 264
GR +WT A ++L LF
Sbjct: 265 GRLTLWTAPAVEKLRGLF 282
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +1
Query: 25 KSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXAPGG 204
+ + +RAG+GKMR RR Q K LI+ + +AFR++PG+++ APGG
Sbjct: 176 EGKHIRAGRGKMRGRRYKQPKSVLIVARNSSAM-KAFRSLPGVDIASPNSLSIRKLAPGG 234
Query: 205 HLGRFIIWTKSAFDRL 252
GR I+T+ A + L
Sbjct: 235 VGGRLTIFTEGAIESL 250
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 52.8 bits (121), Expect = 2e-06
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKG-LTRAFRNIPGIEMXXXXXXXXX 186
VL+ + +R AGKGKMR RR K L + + L A + +PG+++
Sbjct: 182 VLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVL 241
Query: 187 XXAPGGHLGRFIIWTKSAFDRLDPLF 264
APGGH GR I+T A L F
Sbjct: 242 HLAPGGHPGRLTIYTTEALKLLSRRF 267
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Frame = +1
Query: 61 RNRRRVQRK--GPLIIYNKD--KGLTRAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIW 228
R +R+ +++ GPL++ +G RAFRNIPG+++ AP G LGR +I+
Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIF 245
Query: 229 TKSAFDRLD 255
+KSAF+ LD
Sbjct: 246 SKSAFELLD 254
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 47.6 bits (108), Expect = 6e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +1
Query: 238 AFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
AF +LD L+G+W + K N+NLP KM NTDLSR+
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRI 131
Score = 35.9 bits (79), Expect = 0.19
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRN 66
+ KVY SQR+RAGKGKMRN
Sbjct: 43 IKKVYASQRMRAGKGKMRN 61
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 37.9 bits (84), Expect = 0.047
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +1
Query: 34 RLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXAPGGHLG 213
+++AG+G R R+ +R ++ D+ T A RN+ G ++ APGG G
Sbjct: 173 KIKAGQGSARGRK-YRRPASILFVTSDEPSTAA-RNLAGADVATASEVNTEDLAPGGAPG 230
Query: 214 RFIIWTKSA 240
R ++T+SA
Sbjct: 231 RLTVFTESA 239
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +1
Query: 25 KSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXXXAPGG 204
+ ++ R GK +R R + K L + D + RA PG+ APG
Sbjct: 179 EGRKPRTGKSALRGRPKKIGKSILFVVGADGPVIRAVGGFPGVTARPARDLSVLDLAPGA 238
Query: 205 HLGRFIIWTKSAFDRL 252
R +++K+A + L
Sbjct: 239 EPARLTVYSKAAIESL 254
>UniRef50_UPI00005E1AE6 Cluster: putative non-structural protein
NS4/5; n=1; Aquareovirus A|Rep: putative non-structural
protein NS4/5 - Aquareovirus A
Length = 452
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 247 RLDPLFGSWKTPSKEKKNFNLPQPKMANTDLS 342
RLD L SW TP ++ +P+P++ T LS
Sbjct: 72 RLDVLGDSWSTPKHSLRSHRVPEPRVRRTSLS 103
>UniRef50_Q01CR9 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 212
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 138 QHPW--HRDAQREQAEPPEAGTRRPSRQVHHLDQVRFR 245
+H W H D R Q+E P R P+RQ H D+ R R
Sbjct: 82 KHSWSRHSDRARAQSERPRRSVRDPTRQPHPDDRSRRR 119
>UniRef50_A5B5Z1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 686
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -1
Query: 269 EPNSGSSLSKADLVQMMNLPRWP---PGASFRRFSLFTLSISMPGMLRNARV 123
+P S SLS+ LV + LP WP SFR F++ + I P +L +A +
Sbjct: 147 DPTSLVSLSRPQLVTVKALPEWPAISASESFRTFAVL-VGIKAPALLDDAHL 197
>UniRef50_Q4QFI9 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 930
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 147 WHRDAQREQAEPPEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIEGE--EELQPAPAE 320
W R +QRE+ P E P +Q +L++ + E +E E EELQP AE
Sbjct: 622 WQR-SQREEQRPDEEEEEAPEQQ-EYLEEAQSEKELQEDAEQEPQLEPEVEEELQPEEAE 679
Query: 321 DGQHR 335
D +H+
Sbjct: 680 DAEHQ 684
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 132 IPQHPWHRDAQREQAEPPEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIEGEEELQPA 311
+PQH + E+AEP G R P + LD V R A + V + EE L A
Sbjct: 271 VPQHLRAGPGECERAEPAAPGARWPRWPLRDLDAVCVRAAGQDLWHVHGGVRCEEGLHAA 330
Query: 312 PAEDGQH 332
A+ +H
Sbjct: 331 GADADEH 337
>UniRef50_Q8N2J0 Cluster: CDNA FLJ90562 fis, clone OVARC1001163;
n=2; Homo sapiens|Rep: CDNA FLJ90562 fis, clone
OVARC1001163 - Homo sapiens (Human)
Length = 265
Score = 31.9 bits (69), Expect = 3.1
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +3
Query: 117 GSDSCIPQHPWHRDAQREQAEPPEAGTRRPSRQVHHL--DQVRFR*A*PAVRLVEDTIEG 290
G + HP D +REQA AG R P ++HHL D VR R PA+ L +
Sbjct: 127 GHPGAVRGHPGGGDQRREQAGGWHAGRRLP--ELHHLRGDAVRLR--GPALCLPLPGVRR 182
Query: 291 EE-ELQPAPAEDGQH 332
EE E P +H
Sbjct: 183 EEGEFTSPPGTHAEH 197
>UniRef50_UPI00015B54C6 Cluster: PREDICTED: similar to GA16823-PA;
n=2; Apocrita|Rep: PREDICTED: similar to GA16823-PA -
Nasonia vitripennis
Length = 1809
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +3
Query: 114 QGSDSCIPQHPWHRDAQREQAEPPEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIEGE 293
+G S P + + DA+ P + TR+ R H D P V++ ++ +
Sbjct: 1071 RGKRSSSPSYKYRSDAK--DLTPERSSTRKKDRGPDHEDNSTT--LPPLVKVKQEPQSSD 1126
Query: 294 EELQPAPAEDGQHRPQP 344
E + P PAE Q P P
Sbjct: 1127 EAVPPKPAEAPQQPPPP 1143
>UniRef50_Q8NMK2 Cluster: Phosphate uptake regulator; n=4;
Corynebacterium|Rep: Phosphate uptake regulator -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 244
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 243 ESGLGPDDEPAEMAAGCQLQEVQLVHVEHLDARDVAECTSQTLVL 109
ES LG ++ E+ GC+ Q V+L+ +E ARD+ + S ++
Sbjct: 43 ESALGNAEKLEELRTGCESQAVELLALETPVARDLRQVVSSIYIV 87
>UniRef50_Q6FCW9 Cluster: High-affinity phosphate transport protein;
n=5; Proteobacteria|Rep: High-affinity phosphate
transport protein - Acinetobacter sp. (strain ADP1)
Length = 459
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -3
Query: 258 RVKPIESGLGPDDEPA--EMAAGCQLQEVQLV 169
RVK I SG G D+PA E+AA QL +VQ +
Sbjct: 98 RVKAIASGFGVTDQPAAYELAAAQQLAKVQTI 129
>UniRef50_Q4AGF6 Cluster: TPR repeat:TPR repeat; n=1; Chlorobium
phaeobacteroides BS1|Rep: TPR repeat:TPR repeat -
Chlorobium phaeobacteroides BS1
Length = 252
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 220 IIWTKSAFDRLDPLFGSWKTPSKE 291
+++ S +R DPL GSWK P KE
Sbjct: 28 VLFLSSCAEREDPLEGSWKIPGKE 51
>UniRef50_Q6KA75 Cluster: Peroxisomal membrane protein-like; n=3;
Oryza sativa|Rep: Peroxisomal membrane protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 1030
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 193 APG--GHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANT 333
APG G GR+++ SA + LDP F SW S+E K F++ + A++
Sbjct: 670 APGVDGCSGRYVV-AASAGNALDPGFCSWDYYSREAKAFHIEEISHASS 717
>UniRef50_A3GEV8 Cluster: Predicted protein; n=2; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 717
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 111 GQGSDSCIPQ-HPWHRDAQREQAEPPEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIE 287
G SD + + +PW RD +P + G P HL F+ + R+V +E
Sbjct: 490 GNDSDEWVQRKYPWDRDILDNSGKPFK-GFNSPVEYARHLYGTCFQKK--SARIVGVMLE 546
Query: 288 GEEELQPA 311
GE E++PA
Sbjct: 547 GEAEIEPA 554
>UniRef50_Q7UID6 Cluster: Similar to hexosyltransferase; n=1;
Pirellula sp.|Rep: Similar to hexosyltransferase -
Rhodopirellula baltica
Length = 468
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 1 ARGVLKVYKSQRLRAGKGKMRN--RRRVQRKGPLIIYN 108
AR VL + S+ G+G++RN RRR+ R I YN
Sbjct: 166 ARLVLATFMSEHTEQGRGRLRNWARRRLIRSADAITYN 203
>UniRef50_A7K1T2 Cluster: KAP family P-loop domain protein; n=2;
Proteobacteria|Rep: KAP family P-loop domain protein -
Vibrio sp. Ex25
Length = 758
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -1
Query: 290 SFDGVFHEPNSGSSLSKADLVQMMNLPRWPPGASFRRFSLFTLSISMPGMLRNA 129
+FD F LS +DL +M++L A RFS F LS+ G+L+NA
Sbjct: 468 NFDKYFQFSIPSGELSNSDLQEMLSLT-----ADSDRFSSFILSLKERGILKNA 516
>UniRef50_Q16IY0 Cluster: Smaug protein; n=2; Aedes aegypti|Rep:
Smaug protein - Aedes aegypti (Yellowfever mosquito)
Length = 933
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 111 GQGSDSCIPQHPWHRDAQREQAEPPEAGTRRPSRQVHHLDQ 233
G GS+S I H H + Q P+ +P +Q HH Q
Sbjct: 768 GSGSNSTIKHHVQHLQQSQSQHPLPQQQQPQPPQQSHHAQQ 808
>UniRef50_Q9P8A1 Cluster: Cytochrome P450; n=2; Agaricus
bisporus|Rep: Cytochrome P450 - Agaricus bisporus
(Common mushroom)
Length = 366
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 224 MMNLPRWPPGASFRRFSLFTLSISMPGMLRNARVRPLSLL 105
M ++P W PGA ++R +LF ++ R RVRP +L+
Sbjct: 74 MKHIPSWFPGAGWKRQALFWRDVN-----REVRVRPFNLV 108
>UniRef50_Q0UDD4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 643
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 231 GPDDEPAEMAAGCQLQEVQLVHVEHLDARDVAECTSQTLVLIIDDKGSFALD 76
G E A+ AAG Q +Q V+ A D+ + +VL IDD GS +
Sbjct: 268 GSPAEIAQQAAGKVNQVIQRWRVQKEIANDIVKLALYDIVLYIDDSGSMQFE 319
>UniRef50_A5DW46 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1116
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 269 EPNSGSSLSKADLVQMMNLPRWPPGASFRRFSLFTLSISMPG 144
+PN S+ + + N+P +PP RF+ ++ S PG
Sbjct: 246 QPNFDEKFSRTEAYPIANVPNYPPPQLMPRFNSMPVNTSAPG 287
>UniRef50_Q28QX7 Cluster: Reductive dehalogenase; n=4;
Rhodobacteraceae|Rep: Reductive dehalogenase -
Jannaschia sp. (strain CCS1)
Length = 399
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 270 RAEQRVKPIESGLG-PDDEPAEMAAGCQLQEVQLVHVEHLDAR 145
R + V P ++ LG P+ E AEM A +L LV + H DAR
Sbjct: 106 RDDTPVAPDKADLGAPEAEAAEMKAVAKLFGADLVGITHFDAR 148
>UniRef50_Q6UVT8 Cluster: Ribosomal protein L5; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein L5 -
Pseudendoclonium akinetum (Green alga)
Length = 257
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 202 GHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLP 312
GHL + W + R FG W+T +K N NLP
Sbjct: 33 GHLNKN--WIERDLPRYQLTFGGWQTNEDKKNNVNLP 67
>UniRef50_A5AI49 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 382
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 135 PQHPWHRDAQREQAEPPEAGTRRPSRQVHHLDQVR 239
P H H+ Q + EPP+ T P HH+ V+
Sbjct: 42 PAHDDHQQPQHMEQEPPQPPTADPHTNDHHVPHVK 76
>UniRef50_Q6WKZ4 Cluster: Rab11 family-interacting protein 1; n=26;
Euteleostomi|Rep: Rab11 family-interacting protein 1 -
Homo sapiens (Human)
Length = 1283
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 69 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 227
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 832 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 885
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,555,660
Number of Sequences: 1657284
Number of extensions: 5631029
Number of successful extensions: 18619
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 17931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18576
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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