Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K08
         (350 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    25   0.82 
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   1.1  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   2.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   7.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   7.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   7.6  

>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 199 GGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKN 300
           GGH+   I W   + DR DP     K  +++ +N
Sbjct: 101 GGHINHSIFWKNLSPDRSDPSAELQKALNRDFQN 134


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 171 VHVEHLDARDVAECTSQTLVLIIDDKGSF 85
           +HV HL AR +     Q L+L +  + SF
Sbjct: 216 IHVNHLQARKMLPSRPQLLLLELCKRSSF 244


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 265 GSWKTPSKEKKNFNLPQPK 321
           G  K P K+KK  +LP+P+
Sbjct: 153 GQSKQPKKKKKKRSLPKPE 171


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 111 GQGSDSCIPQHPWHRDA 161
           G  S + +P HP+H D+
Sbjct: 242 GSSSATPLPLHPYHTDS 258


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 111 GQGSDSCIPQHPWHRDA 161
           G  S + +P HP+H D+
Sbjct: 242 GSSSATPLPLHPYHTDS 258


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 247 RLDPLFGSWKTPSKEKKNFNLPQ 315
           RL P  G+W++    + NF+L Q
Sbjct: 915 RLIPDIGAWQSRKHGEVNFHLSQ 937


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,604
Number of Sequences: 2352
Number of extensions: 6047
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)