Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K08
(350 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 167 5e-42
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 167 5e-42
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 167 5e-42
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 76 1e-14
AY061121-1|AAL28669.1| 316|Drosophila melanogaster LD10431p pro... 28 3.8
AF279258-1|AAG02080.1| 316|Drosophila melanogaster transmembran... 28 3.8
AF265296-1|AAF75771.1| 316|Drosophila melanogaster putative mul... 28 3.8
AE014296-2778|AAN11736.2| 316|Drosophila melanogaster CG3971-PB... 28 3.8
AE014296-2777|AAF49430.2| 316|Drosophila melanogaster CG3971-PA... 28 3.8
BT021209-1|AAX33357.1| 766|Drosophila melanogaster SD09342p pro... 27 8.9
AE014296-2499|ABI31254.1| 1063|Drosophila melanogaster CG7255-PH... 27 8.9
AE014296-2498|ABC66142.1| 1063|Drosophila melanogaster CG7255-PF... 27 8.9
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 167 bits (405), Expect = 5e-42
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIPGIE
Sbjct: 183 IQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLK 242
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGGH+GRF+IWT+SAF RL+ LFG+WK PS KK +NLPQPKMANTDLSRL
Sbjct: 243 LAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRL 295
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 167 bits (405), Expect = 5e-42
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIPGIE
Sbjct: 183 IQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLK 242
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGGH+GRF+IWT+SAF RL+ LFG+WK PS KK +NLPQPKMANTDLSRL
Sbjct: 243 LAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRL 295
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 167 bits (405), Expect = 5e-42
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXXXXXXXX 189
+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIPGIE
Sbjct: 183 IQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLK 242
Query: 190 XAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRL 348
APGGH+GRF+IWT+SAF RL+ LFG+WK PS KK +NLPQPKMANTDLSRL
Sbjct: 243 LAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRL 295
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 76.2 bits (179), Expect = 1e-14
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +1
Query: 10 VLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIP 147
+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIP
Sbjct: 183 IQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIP 228
>AY061121-1|AAL28669.1| 316|Drosophila melanogaster LD10431p
protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 46 GKGKMRNRRRVQRKGPLIIYN 108
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AF279258-1|AAG02080.1| 316|Drosophila melanogaster transmembrane
protein Noa protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 46 GKGKMRNRRRVQRKGPLIIYN 108
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AF265296-1|AAF75771.1| 316|Drosophila melanogaster putative
multipass transmembrane protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 46 GKGKMRNRRRVQRKGPLIIYN 108
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AE014296-2778|AAN11736.2| 316|Drosophila melanogaster CG3971-PB,
isoform B protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 46 GKGKMRNRRRVQRKGPLIIYN 108
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AE014296-2777|AAF49430.2| 316|Drosophila melanogaster CG3971-PA,
isoform A protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 46 GKGKMRNRRRVQRKGPLIIYN 108
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>BT021209-1|AAX33357.1| 766|Drosophila melanogaster SD09342p
protein.
Length = 766
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 159 AQREQAEPPEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIEGEEELQPAPAEDGQHRP 338
+Q E P T+ R H + + ED ++GE EL+P P E+ + RP
Sbjct: 536 SQASTIEDPLHSTKFKDRLSHIIMNANAHQVKVVAKRSED-VDGEVELEPVPDEEPKTRP 594
>AE014296-2499|ABI31254.1| 1063|Drosophila melanogaster CG7255-PH,
isoform H protein.
Length = 1063
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 159 AQREQAEPPEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIEGEEELQPAPAEDGQHRP 338
+Q E P T+ R H + + ED ++GE EL+P P E+ + RP
Sbjct: 833 SQASTIEDPLHSTKFKDRLSHIIMNANAHQVKVVAKRSED-VDGEVELEPVPDEEPKTRP 891
>AE014296-2498|ABC66142.1| 1063|Drosophila melanogaster CG7255-PF,
isoform F protein.
Length = 1063
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 159 AQREQAEPPEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIEGEEELQPAPAEDGQHRP 338
+Q E P T+ R H + + ED ++GE EL+P P E+ + RP
Sbjct: 833 SQASTIEDPLHSTKFKDRLSHIIMNANAHQVKVVAKRSED-VDGEVELEPVPDEEPKTRP 891
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,896,993
Number of Sequences: 53049
Number of extensions: 268235
Number of successful extensions: 879
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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