Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K08
         (350 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.26 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   1.8  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   5.6  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    20   7.4  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    20   7.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    20   9.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.0 bits (52), Expect = 0.26
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 205 HLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLP 312
           H   +  WT ++ +   P  G +KT SK    F+LP
Sbjct: 25  HRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 185 RRFSLFTLSISMPGMLRNARVR 120
           R++++  L I +  +LRN RVR
Sbjct: 491 RKYAMLKLKIVLSTILRNFRVR 512


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 153 DARDVAECTSQTLVLIIDDKG 91
           D+RD +  ++ +  +I+ DKG
Sbjct: 86  DSRDKSNTSNTSKTIILSDKG 106


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 153 DARDVAECTSQTLVLIIDDKG 91
           D+RD +  ++ +  +I+ DKG
Sbjct: 86  DSRDRSNASNTSKTVILSDKG 106


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 153 DARDVAECTSQTLVLIIDDKG 91
           D+RD +  ++ +  +I+ DKG
Sbjct: 86  DSRDRSNASNTSKTVILSDKG 106


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 153 DARDVAECTSQTLVLIIDDKG 91
           D+RD +  ++ +  +I+ DKG
Sbjct: 86  DSRDRSNTSNTSKTVILSDKG 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,430
Number of Sequences: 438
Number of extensions: 1565
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)