Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K07
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...   145   2e-37
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...   145   2e-37
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...   133   8e-34
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...   131   4e-33
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.18 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.54 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   2.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.6  

>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298



 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374



 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526



 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602



 Score =  145 bits (351), Expect = 2e-37
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678



 Score =  142 bits (345), Expect = 1e-36
 Identities = 69/70 (98%), Positives = 69/70 (98%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440

Query: 210 IQKESTLHLV 239
           IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score =  133 bits (322), Expect = 8e-34
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 210 IQKE 221
           IQKE
Sbjct: 61  IQKE 64


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score =  131 bits (316), Expect = 4e-33
 Identities = 63/64 (98%), Positives = 63/64 (98%)
 Frame = +3

Query: 30  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 49  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108

Query: 210 IQKE 221
           IQKE
Sbjct: 109 IQKE 112



 Score = 90.6 bits (215), Expect = 7e-21
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 114 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 239
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 42


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 427  P*WRTGTTAASATVRWSSRTTTNRP 501
            P W T TT  + T R ++ +TT RP
Sbjct: 1050 PWWTTTTTRRTTTTRPTTTSTTTRP 1074



 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 433  WRTGTTAASATVRWSSRTTTNRP 501
            W + TT+   T   + RTTT RP
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRP 1065


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 203 IREGSTIFQLFTGEDQSLLIRRDALLILNLGFHIFDSIRGFD 78
           I+E + IF  F G    ++I   +L++LN    +F++  G+D
Sbjct: 201 IKELNMIFNEFFGWPIIMIILYSSLMVLNYIDEVFNNNFGYD 242


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 49  PLRGRPSP*RSNPLILSKM 105
           P R  PSP RS+P++  K+
Sbjct: 73  PKREIPSPKRSSPILAEKV 91


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 23  INDADFCENPYGEDHHPR 76
           IND   C N YG +H  R
Sbjct: 367 INDDGTCGNGYGCEHRWR 384


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,975
Number of Sequences: 336
Number of extensions: 1873
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)