Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K07
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 227 4e-60
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 2e-35
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 145 2e-35
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 145 2e-35
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 135 2e-32
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 76 2e-14
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 54 9e-08
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 4e-05
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 41 5e-04
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 38 0.007
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.015
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.14
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 33 0.19
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.33
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 30 1.3
SB_18472| Best HMM Match : CcmD (HMM E-Value=3.3) 29 3.1
SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5) 28 4.1
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 28 4.1
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 5.4
SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 5.4
SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37) 27 7.1
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 27 7.1
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 27 7.1
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 27 7.1
SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) 27 7.1
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 27 7.1
SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 7.1
SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 7.1
SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) 27 7.1
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 27 7.1
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 27 9.4
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 27 9.4
SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13) 27 9.4
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 227 bits (555), Expect = 4e-60
Identities = 113/150 (75%), Positives = 115/150 (76%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRE 389
IQKESTLHLV NY+TP LAVL+YYKVDENGKI RLRRE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRE 120
Query: 390 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVF 479
C E CGAGVFMA DR YCGKC T VF
Sbjct: 121 CPSESCGAGVFMASHFDRQYCGKCCLTYVF 150
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 145 bits (351), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 80.6 bits (190), Expect = 7e-16
Identities = 40/69 (57%), Positives = 53/69 (76%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQI VK KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYN
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 210 IQKESTLHL 236
I++ S LHL
Sbjct: 136 IKQGSILHL 144
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 135 bits (326), Expect = 2e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 24 STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 203
STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD
Sbjct: 77 STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 136
Query: 204 YNIQK 218
YNIQK
Sbjct: 137 YNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 135 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 239
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 36
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 53.6 bits (123), Expect = 9e-08
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 24 STMQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 200
S I V TLTG+ I + + P TI VK I+ K G P DQQRL+F G+ L D T
Sbjct: 69 SNPHIAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFE 128
Query: 201 DYNIQKESTLHLV 239
I +TLHL+
Sbjct: 129 KVGIFAGATLHLI 141
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 200
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 201 DYNIQKES 224
+YNI ++S
Sbjct: 127 EYNIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 27 TMQIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 203
T Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+
Sbjct: 5 TFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAK 64
Query: 204 YNIQK 218
N+++
Sbjct: 65 VNLKQ 69
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 131
M ++++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 206
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 207 NIQKESTLHLV 239
++++ + +V
Sbjct: 61 SVKENDVILMV 71
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 54 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 218
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRE 98
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 132 GIPPDQQRLIFAGKQLEDGRTLSDYN 209
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3
Query: 39 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 218
FV G+ ITL P + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 219 ESTLHL 236
+TL +
Sbjct: 229 GATLQI 234
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +3
Query: 36 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 215
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 216 KEST 227
+++T
Sbjct: 245 QKAT 248
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 93 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 236
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 42 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 212
+ +L G I P +++A IP DQ L F + LEDGR Y +
Sbjct: 533 LNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRPDVYQM 589
>SB_18472| Best HMM Match : CcmD (HMM E-Value=3.3)
Length = 304
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 397 PVHSRRSRWILPFSSTL*YRRTASLTFFFLCLIFLGV 287
P + ++ P S Y S+TFFFLC +FL +
Sbjct: 8 PFREEMNSYVGPSGSYKEYDTLRSVTFFFLCSLFLNL 44
>SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5)
Length = 635
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 357 ENGKIHRLRRECTGEQC 407
+ G+IH L++EC G QC
Sbjct: 106 DGGEIHNLQQECIGSQC 122
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 42 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR---TLSDYNI 212
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 213 QKESTLHLV 239
+T+ L+
Sbjct: 120 PPYATISLI 128
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRH 446
YK D GK+ L+R C ++C ++ V D +
Sbjct: 364 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVDNN 397
>SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHS 467
YK D GK+ L+R C ++C + + C +C S
Sbjct: 515 YKCDNCGKVGHLKRVCQSKECKKXXXXQGGKPKTACHRCGS 555
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 568 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 599
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRH 446
YK D GK+ L+R C ++C ++ V D +
Sbjct: 207 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVDNN 240
>SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37)
Length = 493
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 63 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 94
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 372 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 403
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 898 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 929
>SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 403
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 245 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 276
>SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 342
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 202 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 233
>SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 369
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05)
Length = 415
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 66 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 97
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 57 GKTITLEVEPS-DTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 185
G T E+E + +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05)
Length = 717
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 268 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 299
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D GK+ L+R C ++C ++ V D
Sbjct: 428 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 459
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 51 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 182
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
+Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 210 IQ 215
+Q
Sbjct: 774 LQ 775
>SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13)
Length = 436
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 440
YK D +G + L+R C ++C ++ V D
Sbjct: 61 YKCDNSGNVGHLKRVCKSKECKETKYVEVSVD 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,450,922
Number of Sequences: 59808
Number of extensions: 271292
Number of successful extensions: 631
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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