Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K07
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 142 2e-34
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 142 2e-34
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 142 2e-34
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 142 2e-34
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 142 2e-34
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 133 8e-32
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 133 8e-32
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 94 5e-20
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 83 9e-17
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 4e-14
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 43 1e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 43 1e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.003
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 36 0.013
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 35 0.031
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 35 0.031
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.041
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 35 0.041
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.094
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.22
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 30 0.87
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 30 0.87
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 1.5
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 3.5
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 139 bits (337), Expect = 1e-33
Identities = 68/70 (97%), Positives = 68/70 (97%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 170
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 745 IQKESTLHLV 754
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 821 IQKESTLHLV 830
Score = 139 bits (337), Expect = 1e-33
Identities = 68/70 (97%), Positives = 68/70 (97%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 745 IQKESTLHLV 754
Score = 140 bits (340), Expect = 4e-34
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 210 IQKESTLHLV 239
IQK+STLHLV
Sbjct: 821 IQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 142 bits (343), Expect = 2e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 210 IQKESTLHLV 239
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 133 bits (321), Expect = 8e-32
Identities = 67/147 (45%), Positives = 91/147 (61%)
Frame = +3
Query: 36 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 215
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 216 KESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRECT 395
E+T+++ Y+TP LAVL+YYK+DENGKI RLR+EC
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116
Query: 396 GEQCGAGVFMAVMEDRHYCGKCHSTMV 476
CG GVFMA +RHYCG+CH T+V
Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 133 bits (321), Expect = 8e-32
Identities = 67/147 (45%), Positives = 91/147 (61%)
Frame = +3
Query: 36 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 215
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 216 KESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRECT 395
E+T+++ Y+TP LAVL+YYK+DENGKI RLR+EC
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116
Query: 396 GEQCGAGVFMAVMEDRHYCGKCHSTMV 476
CG GVFMA +RHYCG+CH T+V
Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 94.3 bits (224), Expect = 5e-20
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 210 IQKESTLHLV 239
+ S LHLV
Sbjct: 61 VLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 83.4 bits (197), Expect = 9e-17
Identities = 37/70 (52%), Positives = 51/70 (72%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 209
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 210 IQKESTLHLV 239
I+ E +HLV
Sbjct: 221 IRDEDIIHLV 230
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +3
Query: 51 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 230
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 231 HL 236
L
Sbjct: 152 RL 153
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 6 RVGVR*STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 137
++ V TM + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 51 QISVDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 4e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 140
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +3
Query: 33 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 212
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 213 QKESTL 230
QK ST+
Sbjct: 214 QKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 200
++I+V+ G+T TL+ SDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 201 DYNIQKESTLHL 236
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 137
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEV 80
+ +FVKT TGKTIT+ +
Sbjct: 181 IDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/68 (39%), Positives = 35/68 (51%)
Frame = +3
Query: 33 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 212
Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 213 QKESTLHL 236
ST+ L
Sbjct: 99 SNNSTMDL 106
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +3
Query: 36 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 173
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +3
Query: 54 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 233
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 234 L 236
L
Sbjct: 241 L 241
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 72 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 230
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 72 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 236
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLED 185
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 35.1 bits (77), Expect = 0.031
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +3
Query: 51 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 230
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 231 HL 236
+L
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 35.1 bits (77), Expect = 0.031
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +3
Query: 51 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 230
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 231 HL 236
+L
Sbjct: 644 YL 645
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.7 bits (76), Expect = 0.041
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 48 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 206
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 34.7 bits (76), Expect = 0.041
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +3
Query: 24 STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 203
+T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 204 YNIQKESTLHLV 239
I T+HLV
Sbjct: 79 AGISDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 34.7 bits (76), Expect = 0.041
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +3
Query: 24 STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 203
+T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 204 YNIQKESTLHLV 239
I T+HLV
Sbjct: 79 AGISDGQTVHLV 90
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.094
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +3
Query: 45 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 224
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 225 TLHLV 239
+ L+
Sbjct: 73 QIMLL 77
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 32.3 bits (70), Expect = 0.22
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 51 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 230
L G I +E++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 6 RVGVR*STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 167
R+ V+ M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 531 RLNVQDGVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 6 RVGVR*STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 167
R+ V+ M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 531 RLNVQDGVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 206
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 207 NIQK 218
IQ+
Sbjct: 56 KIQE 59
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 42 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 140
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical
protein F34H10.1 protein.
Length = 142
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 198 SDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHR 377
SD I+ +T+++ Y+ P +Y+K+DENGKI R
Sbjct: 52 SDCGIKAAATIYVNCELLGGAKKRKKKVYTIPKKNNISQRKSSSPSPKYFKIDENGKISR 111
Query: 378 L 380
L
Sbjct: 112 L 112
>Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical
protein K08C9.7 protein.
Length = 154
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 339 RYYKVDENGKIHRL 380
+Y+K+DENGKI RL
Sbjct: 111 KYFKIDENGKISRL 124
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 72 LEVEPSDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 236
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = +3
Query: 30 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 185
+Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 60 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 158
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,468,764
Number of Sequences: 27780
Number of extensions: 194511
Number of successful extensions: 609
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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