Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K06
         (362 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ...    73   2e-12
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim...    72   4e-12
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary...    67   8e-11
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos...    39   0.024
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ...    34   0.67 
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5...    31   8.3  

>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 245

 Score = 72.9 bits (171), Expect = 2e-12
 Identities = 40/81 (49%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
           +VR+YV++R LP KEGK   K +  APKIQRLVTPVVLQ                    A
Sbjct: 152 DVRQYVIRRPLPEKEGK---KAKSKAPKIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAA 208

Query: 185 DYAKLLAQRKKESKVRRQEEI 247
           DYAKLLA+R KE+K +R E++
Sbjct: 209 DYAKLLAKRAKEAKEKRHEQL 229


>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
           Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
           albopictus (Forest day mosquito)
          Length = 349

 Score = 71.7 bits (168), Expect = 4e-12
 Identities = 37/81 (45%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
           +VR+YVVKR LP K+GK   KPR  APKIQRL+TPVVLQ                  AEA
Sbjct: 152 DVRQYVVKRPLPEKDGK---KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEA 208

Query: 185 DYAKLLAQRKKESKVRRQEEI 247
           +Y K+L  R+++ ++RR+  +
Sbjct: 209 EYMKILHLRRRQERIRRRSRL 229


>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
           Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
           (Human)
          Length = 249

 Score = 67.3 bits (157), Expect = 8e-11
 Identities = 41/81 (50%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
           +VR+YVV++ L  KEGK   KPR  APKIQRLVTP VLQ                    A
Sbjct: 152 DVRQYVVRKPLN-KEGK---KPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAA 207

Query: 185 DYAKLLAQRKKESKVRRQEEI 247
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
           Trypanosomatidae|Rep: 40S ribosomal protein S6 -
           Leishmania major
          Length = 249

 Score = 39.1 bits (87), Expect = 0.024
 Identities = 25/76 (32%), Positives = 37/76 (48%)
 Frame = +2

Query: 5   EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
           +VR+YVV+R +  K GK   K R  APKIQRL+TP V                   +   
Sbjct: 155 DVRKYVVRRRV-VKSGK---KDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERR 210

Query: 185 DYAKLLAQRKKESKVR 232
           +Y +L+A  ++  + R
Sbjct: 211 EYLRLIASNRRALRQR 226


>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 293

 Score = 34.3 bits (75), Expect = 0.67
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = +2

Query: 8   VRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEAD 187
           +++ V++R     +GK+  K     PKIQRL+TP  +                  +A+ +
Sbjct: 156 IKKSVIRRTFKTAKGKDRTK----CPKIQRLITPERILRKKVYKAEKTQRYVKTNAAKEE 211

Query: 188 YAKLLAQRKKE 220
           Y K L++ KK+
Sbjct: 212 YEKFLSEWKKQ 222


>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
           Plasmodium|Rep: 40S ribosomal protein S6, putative -
           Plasmodium vivax
          Length = 391

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 22/80 (27%), Positives = 34/80 (42%)
 Frame = +2

Query: 5   EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
           +VR+YV+ R +      +N K R+  PKIQRLVT   L                      
Sbjct: 193 DVRKYVIGRAI-----SKNGKNRFIKPKIQRLVTEKRLLRKRTLIAKKEKRRLEKKKVIK 247

Query: 185 DYAKLLAQRKKESKVRRQEE 244
           +Y K+L + + E   +  E+
Sbjct: 248 EYKKVLNKYRNELLTKTDED 267


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,827,095
Number of Sequences: 1657284
Number of extensions: 3818417
Number of successful extensions: 7714
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7708
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)