Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K06
         (362 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   3.5  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           22   8.1  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 144 SRRNVWPNASQLRLIT 191
           SRRN W N S   LIT
Sbjct: 111 SRRNAWGNLSYADLIT 126


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 22  CKTPFTCQRGQGKCKTQIQ 78
           C    T  + +GKC +Q+Q
Sbjct: 109 CNGDVTVNKCEGKCNSQVQ 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,842
Number of Sequences: 2352
Number of extensions: 4659
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)