Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K06
(362 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 76 1e-14
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 76 1e-14
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 76 1e-14
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 76 1e-14
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 76 1e-14
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 76 1e-14
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 76 1e-14
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 76 1e-14
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 29 1.8
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 29 1.8
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 29 1.8
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 29 1.8
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 29 1.8
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 29 1.8
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 76.2 bits (179), Expect = 1e-14
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2
Query: 5 EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
+VRR+VV+R LPAK+ K K APKIQRL+TPVVLQ A A
Sbjct: 152 DVRRFVVRRPLPAKDNK---KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 208
Query: 185 DYAKLLAQRKKESKVRRQE 241
DYAKLL QRKKESK +R+E
Sbjct: 209 DYAKLLVQRKKESKAKREE 227
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 76.2 bits (179), Expect = 1e-14
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2
Query: 5 EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
+VRR+VV+R LPAK+ K K APKIQRL+TPVVLQ A A
Sbjct: 152 DVRRFVVRRPLPAKDNK---KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 208
Query: 185 DYAKLLAQRKKESKVRRQE 241
DYAKLL QRKKESK +R+E
Sbjct: 209 DYAKLLVQRKKESKAKREE 227
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 76.2 bits (179), Expect = 1e-14
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2
Query: 5 EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
+VRR+VV+R LPAK+ K K APKIQRL+TPVVLQ A A
Sbjct: 152 DVRRFVVRRPLPAKDNK---KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 208
Query: 185 DYAKLLAQRKKESKVRRQE 241
DYAKLL QRKKESK +R+E
Sbjct: 209 DYAKLLVQRKKESKAKREE 227
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 76.2 bits (179), Expect = 1e-14
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2
Query: 5 EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
+VRR+VV+R LPAK+ K K APKIQRL+TPVVLQ A A
Sbjct: 152 DVRRFVVRRPLPAKDNK---KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 208
Query: 185 DYAKLLAQRKKESKVRRQE 241
DYAKLL QRKKESK +R+E
Sbjct: 209 DYAKLLVQRKKESKAKREE 227
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 76.2 bits (179), Expect = 1e-14
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2
Query: 5 EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
+VRR+VV+R LPAK+ K K APKIQRL+TPVVLQ A A
Sbjct: 121 DVRRFVVRRPLPAKDNK---KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 177
Query: 185 DYAKLLAQRKKESKVRRQE 241
DYAKLL QRKKESK +R+E
Sbjct: 178 DYAKLLVQRKKESKAKREE 196
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 76.2 bits (179), Expect = 1e-14
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2
Query: 5 EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
+VRR+VV+R LPAK+ K K APKIQRL+TPVVLQ A A
Sbjct: 121 DVRRFVVRRPLPAKDNK---KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 177
Query: 185 DYAKLLAQRKKESKVRRQE 241
DYAKLL QRKKESK +R+E
Sbjct: 178 DYAKLLVQRKKESKAKREE 196
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 76.2 bits (179), Expect = 1e-14
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2
Query: 5 EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
+VRR+VV+R LPAK+ K K APKIQRL+TPVVLQ A A
Sbjct: 155 DVRRFVVRRPLPAKDNK---KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 211
Query: 185 DYAKLLAQRKKESKVRRQE 241
DYAKLL QRKKESK +R+E
Sbjct: 212 DYAKLLVQRKKESKAKREE 230
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 76.2 bits (179), Expect = 1e-14
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2
Query: 5 EVRRYVVKRLLPAKEGKENAKPRYNAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSAEA 184
+VRR+VV+R LPAK+ K K APKIQRL+TPVVLQ A A
Sbjct: 152 DVRRFVVRRPLPAKDNK---KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 208
Query: 185 DYAKLLAQRKKESKVRRQE 241
DYAKLL QRKKESK +R+E
Sbjct: 209 DYAKLLVQRKKESKAKREE 227
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 176 AEADYAKLLAQRKKESKVRR 235
A A+Y KLL +RKKESK R
Sbjct: 163 AIAEYVKLLVKRKKESKANR 182
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 176 AEADYAKLLAQRKKESKVRR 235
A A+Y KLL +RKKESK R
Sbjct: 163 AIAEYVKLLVKRKKESKANR 182
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 176 AEADYAKLLAQRKKESKVRR 235
A A+Y KLL +RKKESK R
Sbjct: 112 AIAEYVKLLVKRKKESKANR 131
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 176 AEADYAKLLAQRKKESKVRR 235
A A+Y KLL +RKKESK R
Sbjct: 110 AIAEYVKLLVKRKKESKANR 129
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 176 AEADYAKLLAQRKKESKVRR 235
A A+Y KLL +RKKESK R
Sbjct: 98 AIAEYVKLLVKRKKESKANR 117
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 176 AEADYAKLLAQRKKESKVRR 235
A A+Y KLL +RKKESK R
Sbjct: 98 AIAEYVKLLVKRKKESKANR 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,821,154
Number of Sequences: 53049
Number of extensions: 177273
Number of successful extensions: 494
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -