Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K05
(403 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT prote... 101 5e-21
UniRef50_Q8BKL1 Cluster: 12 days embryo spinal ganglion cDNA, RI... 86 2e-16
UniRef50_Q4S5J9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 84 1e-15
UniRef50_O75177 Cluster: SS18-like protein 1; n=30; Tetrapoda|Re... 82 5e-15
UniRef50_Q15532 Cluster: SSXT protein; n=56; Euteleostomi|Rep: S... 79 2e-14
UniRef50_Q9W3G1 Cluster: CG10555-PA; n=2; Drosophila melanogaste... 76 3e-13
UniRef50_Q16FM9 Cluster: Putative uncharacterized protein; n=1; ... 75 5e-13
UniRef50_A7SAM5 Cluster: Predicted protein; n=1; Nematostella ve... 74 9e-13
UniRef50_UPI0000D57906 Cluster: PREDICTED: hypothetical protein;... 70 2e-11
UniRef50_Q4SDR2 Cluster: Chromosome undetermined SCAF14633, whol... 70 2e-11
UniRef50_Q9UHA2 Cluster: SS18-like protein 2; n=12; Amniota|Rep:... 69 5e-11
UniRef50_O23091 Cluster: A_TM018A10.22 protein; n=7; Viridiplant... 64 1e-09
UniRef50_Q2R176 Cluster: SSXT protein containing protein, expres... 59 4e-08
UniRef50_Q9N4L9 Cluster: Putative uncharacterized protein; n=1; ... 55 6e-07
UniRef50_Q550F9 Cluster: Myb domain-containing protein; n=2; Dic... 51 1e-05
UniRef50_A3CHJ3 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_Q8L8A5 Cluster: GRF1-interacting factor 1; n=1; Arabido... 49 3e-05
UniRef50_A7QVR7 Cluster: Chromosome chr7 scaffold_192, whole gen... 49 3e-05
UniRef50_Q5BSY5 Cluster: SJCHGC03056 protein; n=1; Schistosoma j... 49 4e-05
UniRef50_A2EDP6 Cluster: Putative uncharacterized protein; n=1; ... 46 4e-04
UniRef50_Q6AVI1 Cluster: Expressed protein; n=5; Magnoliophyta|R... 45 5e-04
UniRef50_A5K7U5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.52
UniRef50_A0DN04 Cluster: Chromosome undetermined scaffold_57, wh... 34 0.91
UniRef50_UPI00015B51E9 Cluster: PREDICTED: similar to laminin ga... 33 2.8
UniRef50_UPI000023E3E8 Cluster: hypothetical protein FG02876.1; ... 33 2.8
UniRef50_Q7N114 Cluster: Complete genome; segment 13/17; n=3; Ph... 33 2.8
UniRef50_A2BPQ5 Cluster: Uncharacterized deoxyribodipyrimidine p... 33 2.8
UniRef50_A4VCP6 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_Q18WN7 Cluster: Twin-arginine translocation pathway sig... 32 4.9
UniRef50_A0BTY8 Cluster: Chromosome undetermined scaffold_128, w... 32 4.9
UniRef50_A5KAZ2 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT protein
(Synovial sarcoma, translocated to X chromosome) (SYT
protein); n=1; Apis mellifera|Rep: PREDICTED: similar to
SSXT protein (Synovial sarcoma, translocated to X
chromosome) (SYT protein) - Apis mellifera
Length = 608
Score = 101 bits (242), Expect = 5e-21
Identities = 51/65 (78%), Positives = 55/65 (84%)
Frame = +2
Query: 74 MSVAFAVRGNRPPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLA 253
MSV FA RG RPP +PAQIQKMLDEN LIQTIQEYQ KG+ EC QYQQ+LHRNLVYLA
Sbjct: 1 MSVTFAQRG-RPPPNPAQIQKMLDENSQLIQTIQEYQNKGKPQECIQYQQMLHRNLVYLA 59
Query: 254 SVADA 268
S+ADA
Sbjct: 60 SIADA 64
>UniRef50_Q8BKL1 Cluster: 12 days embryo spinal ganglion cDNA, RIKEN
full-length enriched library, clone:D130059H17
product:synovial sarcoma translocation, Chromosome 18,
full insert sequence; n=5; Eutheria|Rep: 12 days embryo
spinal ganglion cDNA, RIKEN full-length enriched
library, clone:D130059H17 product:synovial sarcoma
translocation, Chromosome 18, full insert sequence - Mus
musculus (Mouse)
Length = 344
Score = 86.2 bits (204), Expect = 2e-16
Identities = 49/101 (48%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLDEN HLIQ I +YQ KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVY 60
Query: 248 LASVADA----XXXXXXXXXXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG +SQ+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQTMPMGPGGMSQSGPPPPPRS 101
>UniRef50_Q4S5J9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 452
Score = 83.8 bits (198), Expect = 1e-15
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Frame = +2
Query: 74 MSVAFAVRGNRPPLSPAQ--IQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAF+ R Q IQKMLDEN HLIQ I EYQ+KG+L EC QYQQ+LHRNLVY
Sbjct: 1 MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMEYQSKGKLAECTQYQQILHRNLVY 60
Query: 248 LASVADA 268
LA++AD+
Sbjct: 61 LATIADS 67
>UniRef50_O75177 Cluster: SS18-like protein 1; n=30; Tetrapoda|Rep:
SS18-like protein 1 - Homo sapiens (Human)
Length = 396
Score = 81.8 bits (193), Expect = 5e-15
Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +2
Query: 74 MSVAFAVRGNRPPLSPAQ--IQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R Q IQKMLDEN HLIQ I EYQ+KG+ EC QYQQ+LHRNLVY
Sbjct: 1 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY 60
Query: 248 LASVADA 268
LA++AD+
Sbjct: 61 LATIADS 67
>UniRef50_Q15532 Cluster: SSXT protein; n=56; Euteleostomi|Rep: SSXT
protein - Homo sapiens (Human)
Length = 418
Score = 79.4 bits (187), Expect = 2e-14
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADA----XXXXXXXXXXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 101
>UniRef50_Q9W3G1 Cluster: CG10555-PA; n=2; Drosophila
melanogaster|Rep: CG10555-PA - Drosophila melanogaster
(Fruit fly)
Length = 926
Score = 75.8 bits (178), Expect = 3e-13
Identities = 40/97 (41%), Positives = 51/97 (52%)
Frame = +2
Query: 113 LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVADAXXXXXXXX 292
++ AQIQKMLDEN LIQTIQ++Q+ G+ EC Y LHRNLVYLA +AD
Sbjct: 143 VNSAQIQKMLDENCGLIQTIQDFQSMGKAQECMSYHVALHRNLVYLAQLADPAMNISQIL 202
Query: 293 XXXXXXAPGNVSQAPSSNPPSSGVDVPGGSQQQYRAP 403
+ Q PP+ + GG QQ + P
Sbjct: 203 PPPHILQTQAMQQGGQQTPPTGPHGMLGGPPQQQQQP 239
>UniRef50_Q16FM9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 102
Score = 74.9 bits (176), Expect = 5e-13
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +2
Query: 95 RGNRPPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVAD 265
RG PP SP IQK+LDEN LIQTIQ++Q G+ EC Y LHRNLVYLA++AD
Sbjct: 29 RGQGPPPSPMHIQKILDENAGLIQTIQDFQNMGKAHECMSYHVALHRNLVYLANLAD 85
>UniRef50_A7SAM5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 394
Score = 74.1 bits (174), Expect = 9e-13
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +2
Query: 74 MSVAFAVRGNRPPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLA 253
MSVAF RP S +Q++LDEN LIQ I +YQ KG+ E QYQQ+LHRNLVYLA
Sbjct: 1 MSVAFT-SARRPEPSSQSVQELLDENTQLIQAIVDYQNKGKAYESTQYQQLLHRNLVYLA 59
Query: 254 SVADA 268
++AD+
Sbjct: 60 TLADS 64
>UniRef50_UPI0000D57906 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 371
Score = 69.7 bits (163), Expect = 2e-11
Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 74 MSVAFAVRG-NRPPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYL 250
MSV F RG NRPP +PAQ+QKMLDEN HLIQTIQEYQ+KG+ E Q + N ++
Sbjct: 1 MSVGFGQRGGNRPPPNPAQVQKMLDENGHLIQTIQEYQSKGKAPEVVQSPPHFY-NYIFY 59
Query: 251 ASVAD 265
+ VA+
Sbjct: 60 SDVAN 64
>UniRef50_Q4SDR2 Cluster: Chromosome undetermined SCAF14633, whole
genome shotgun sequence; n=3; Euteleostomi|Rep:
Chromosome undetermined SCAF14633, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 99
Score = 69.7 bits (163), Expect = 2e-11
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +2
Query: 74 MSVAFAVRGNR--PPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MS+ F + R ++ IQ++LDEN LI+ I EY KG+ +EC QYQQ+LHRN+VY
Sbjct: 27 MSIVFVPKKLRGTAKINQETIQRLLDENDQLIRCITEYMQKGRAMECVQYQQILHRNIVY 86
Query: 248 LASVADA 268
L ++ADA
Sbjct: 87 LGTIADA 93
>UniRef50_Q9UHA2 Cluster: SS18-like protein 2; n=12; Amniota|Rep:
SS18-like protein 2 - Homo sapiens (Human)
Length = 77
Score = 68.5 bits (160), Expect = 5e-11
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +2
Query: 74 MSVAFA---VRGNRPPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLV 244
MSVAF +RG + ++ IQ++L+EN LI+ I EYQ KG+ EC QYQ VLHRNL+
Sbjct: 1 MSVAFVPDWLRG-KAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLI 59
Query: 245 YLASVADA 268
YLA++ADA
Sbjct: 60 YLATIADA 67
>UniRef50_O23091 Cluster: A_TM018A10.22 protein; n=7;
Viridiplantae|Rep: A_TM018A10.22 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 230
Score = 64.1 bits (149), Expect = 1e-09
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 113 LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVADAXXXXXXXX 292
++ QIQK LDEN LI I E Q G+L EC QYQ +L +NL+YLA++ADA
Sbjct: 21 ITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPPAAT 80
Query: 293 XXXXXXAPGNVSQAPSS-NPPSS 358
P ++ PSS PP S
Sbjct: 81 LTSGAMTPQAMAPNPSSMQPPPS 103
>UniRef50_Q2R176 Cluster: SSXT protein containing protein,
expressed; n=6; Poaceae|Rep: SSXT protein containing
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 205
Score = 58.8 bits (136), Expect = 4e-08
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +2
Query: 113 LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVADA 268
++ QIQK LDEN LI I E Q G+L EC QYQ L +NL+YLA++ADA
Sbjct: 22 ITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNLLYLAAIADA 73
>UniRef50_Q9N4L9 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 233
Score = 54.8 bits (126), Expect = 6e-07
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +2
Query: 110 PLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVADAXXXXXXX 289
P + +QK+LDEN LI IQEY + + E ++QQ+LHRNL++L+++AD
Sbjct: 6 PDQQSTVQKLLDENSRLIDIIQEYLNQSRADEAIKHQQLLHRNLLHLSNLADPFLLSQLK 65
Query: 290 XXXXXXXA-PGNVSQAPSSNPPSSGVDVPGGSQQQ 391
A P Q P P +SG P QQQ
Sbjct: 66 DDGTAAAALPDPNQQQP--QPGASGPPAPHLQQQQ 98
>UniRef50_Q550F9 Cluster: Myb domain-containing protein; n=2;
Dictyostelium discoideum|Rep: Myb domain-containing
protein - Dictyostelium discoideum AX4
Length = 894
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +2
Query: 140 LDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVAD 265
++EN H+IQTI E Q G+L EC Q+Q+ LH NL+ LA +AD
Sbjct: 28 IEENRHIIQTIWEKQNLGKLTECEQFQKRLHSNLLLLAPLAD 69
>UniRef50_A3CHJ3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 211
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 140 LDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVAD 265
LDEN LI I E Q G+L EC QYQ L +NL+YLA++AD
Sbjct: 53 LDENKQLILAILENQNLGKLAECAQYQAQLQKNLLYLAAIAD 94
>UniRef50_Q8L8A5 Cluster: GRF1-interacting factor 1; n=1;
Arabidopsis thaliana|Rep: GRF1-interacting factor 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 210
Score = 49.2 bits (112), Expect = 3e-05
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 128 IQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVADA 268
IQ+ LDEN LI I E Q G+L EC + Q L RNL+YLA++AD+
Sbjct: 25 IQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 71
>UniRef50_A7QVR7 Cluster: Chromosome chr7 scaffold_192, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr7 scaffold_192, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 224
Score = 49.2 bits (112), Expect = 3e-05
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +2
Query: 101 NRPPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVAD 265
N ++ IQ+ LDEN LI I E Q G+L EC + Q L RNL+YLA++AD
Sbjct: 17 NLSNITTDHIQQYLDENKSLILKILESQNSGKLSECAENQARLQRNLMYLAAIAD 71
>UniRef50_Q5BSY5 Cluster: SJCHGC03056 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03056 protein - Schistosoma
japonicum (Blood fluke)
Length = 83
Score = 48.8 bits (111), Expect = 4e-05
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 74 MSVAFAVRGNRPPLS--PAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MS FA +R ++ +++LDEN H+I+ + + KG+ E Q Q VL RNLVY
Sbjct: 1 MSGVFAQNSSRYVIAHEATSAKRLLDENEHIIELVADLARKGRFRESVQLQTVLQRNLVY 60
Query: 248 LASVAD 265
L S+ D
Sbjct: 61 LVSLVD 66
>UniRef50_A2EDP6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 142
Score = 45.6 bits (103), Expect = 4e-04
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 113 LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVAD 265
L+ QIQ++LDEN HLI+ I Q +G++++ YQ NL LA+ AD
Sbjct: 6 LTKEQIQQLLDENTHLIKVILTCQNEGRIMDAMLYQTRFQLNLTQLAACAD 56
>UniRef50_Q6AVI1 Cluster: Expressed protein; n=5; Magnoliophyta|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 227
Score = 45.2 bits (102), Expect = 5e-04
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 128 IQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVADA 268
IQ+ LDEN LI I + Q G++ EC + Q L NL+YLA++AD+
Sbjct: 28 IQQYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADS 74
>UniRef50_A5K7U5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 478
Score = 35.1 bits (77), Expect = 0.52
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 125 QIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVAD 265
+I+K +DEN HL I ++ +G EC + L +NL +L +A+
Sbjct: 416 KIKKRIDENDHLFHAINQFMKEGLKNECIPLFERLQQNLFFLVMLAN 462
>UniRef50_A0DN04 Cluster: Chromosome undetermined scaffold_57, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_57,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 206
Score = 34.3 bits (75), Expect = 0.91
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 110 PLSPAQIQKMLDENVHLIQTIQEYQAKGQLLE 205
P S AQ ++L+EN L+ IQE + K QLL+
Sbjct: 106 PRSSAQFDRLLNENTSLLMRIQELEQKNQLLQ 137
>UniRef50_UPI00015B51E9 Cluster: PREDICTED: similar to laminin gamma
1 chain; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to laminin gamma 1 chain - Nasonia vitripennis
Length = 1617
Score = 32.7 bits (71), Expect = 2.8
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 402 GARYCCCEPPGTSTPLDGGLEDGACDTLPGANCC 301
G + C C PPGT DGG+ CD L G C
Sbjct: 876 GCKLCQCYPPGTQERADGGV--APCDQLTGHCFC 907
>UniRef50_UPI000023E3E8 Cluster: hypothetical protein FG02876.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG02876.1 - Gibberella zeae PH-1
Length = 729
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 393 YCCCEPPGTST-PLDGGLEDGACDTLPGAN-CCGGGKRF 283
+C + PG++ P++ L DG C T PG C GGK F
Sbjct: 339 FCTQDNPGSNACPVNSELRDGKCVTSPGGQPDCDGGKGF 377
>UniRef50_Q7N114 Cluster: Complete genome; segment 13/17; n=3;
Photorhabdus luminescens subsp. laumondii|Rep: Complete
genome; segment 13/17 - Photorhabdus luminescens subsp.
laumondii
Length = 237
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 393 YCCCEPPGTSTPLDG--GLEDGACDTLPGANCCGG 295
+C +PPG + DG G E GACD PGA G
Sbjct: 176 FCSGKPPGAARGGDGEHGNEQGACDCEPGAASAAG 210
>UniRef50_A2BPQ5 Cluster: Uncharacterized deoxyribodipyrimidine
photolyase-like protein; n=7; Prochlorococcus
marinus|Rep: Uncharacterized deoxyribodipyrimidine
photolyase-like protein - Prochlorococcus marinus
(strain AS9601)
Length = 496
Score = 32.7 bits (71), Expect = 2.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 162 YKQYKNTKRKDNFWNVIN--ISK-FYTEIWCI*PL*LMLIKIFKIFYRHHNN*LQVTCRK 332
YK+Y R NFWN + I K FY I P+ +++ I K Y HH L +
Sbjct: 316 YKKYGTKMRNSNFWNFEDKPIPKSFYQGNTGIEPVDVVIKNIIKFGYCHHIERLMIVGNF 375
Query: 333 HRLLILHP 356
L +HP
Sbjct: 376 MLLCRIHP 383
>UniRef50_A4VCP6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 192
Score = 32.7 bits (71), Expect = 2.8
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1
Query: 202 QKLSFRLVFLYCLYQMNILV*HFLYLSW 119
++LSF ++L+CL Q +L +F YLSW
Sbjct: 90 KELSFLFLYLFCLCQGQVLFAYFNYLSW 117
>UniRef50_Q18WN7 Cluster: Twin-arginine translocation pathway signal
precursor; n=2; Desulfitobacterium hafniense|Rep:
Twin-arginine translocation pathway signal precursor -
Desulfitobacterium hafniense (strain DCB-2)
Length = 586
Score = 31.9 bits (69), Expect = 4.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 311 APGNVSQAPSSNPPSSGVDVPGGSQQQYRAP 403
A G ++ S+NPP +G D PG SQ Q P
Sbjct: 23 ALGLLTACGSTNPPPAGADTPGASQAQAGVP 53
>UniRef50_A0BTY8 Cluster: Chromosome undetermined scaffold_128,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_128,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1152
Score = 31.9 bits (69), Expect = 4.9
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 95 RGNRPPLSPAQIQKM-LDENVHLIQTIQEYQAKGQLLECHQ-YQQ 223
R NR P ++QK+ D+ ++Q + Q K QLLE HQ +QQ
Sbjct: 274 RKNRKPSPDERVQKVHFDDTPQIVQPDDKAQFKKQLLEAHQEFQQ 318
>UniRef50_A5KAZ2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1323
Score = 31.1 bits (67), Expect = 8.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 49 FCRKKYIYNVRSICCSRQSTSTKPSSNTENVRRECSFDTNNTRIPSERTTFGMSSI 216
F +KK I N ++ + +T+T ++NT CS +PS R F ++ +
Sbjct: 817 FSQKKNICNEKNYTNTNTNTNTNTNTNTNTNTNTCSGSYRKDPLPSSRKNFEVAPV 872
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,869,060
Number of Sequences: 1657284
Number of extensions: 7513716
Number of successful extensions: 24979
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 24063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24964
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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