Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K05
(403 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034494-1|AAH34494.1| 396|Homo sapiens synovial sarcoma transl... 82 8e-16
AL078633-5|CAI18836.1| 396|Homo sapiens synovial sarcoma transl... 82 8e-16
AB014593-1|BAA31668.1| 404|Homo sapiens KIAA0693 protein protein. 82 8e-16
X79201-1|CAA55792.1| 391|Homo sapiens SYT protein. 80 3e-15
CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein. 80 3e-15
CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein. 80 3e-15
BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma transl... 80 3e-15
BC096223-1|AAH96223.1| 418|Homo sapiens synovial sarcoma transl... 80 3e-15
BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma transl... 80 3e-15
AF343880-1|AAK21314.1| 422|Homo sapiens SYT variant 1 protein. 80 3e-15
AF244972-1|AAM00188.1| 414|Homo sapiens SYT protein protein. 80 3e-15
AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein. 80 3e-15
AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2... 80 3e-15
AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2... 80 3e-15
AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1... 80 3e-15
AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1... 80 3e-15
BC096222-1|AAH96222.1| 418|Homo sapiens synovial sarcoma transl... 79 4e-15
AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein... 78 1e-14
BC017804-1|AAH17804.1| 77|Homo sapiens synovial sarcoma transl... 69 8e-12
AF201950-1|AAF17242.1| 77|Homo sapiens kiaa-iso protein protein. 69 8e-12
AF257501-1|AAG31035.1| 369|Homo sapiens SYT/SSX4v fusion protei... 61 1e-09
BC068993-1|AAH68993.1| 399|Homo sapiens SS18L1 protein protein. 37 0.022
AL078633-4|CAC29252.1| 128|Homo sapiens synovial sarcoma transl... 37 0.022
BC032596-1|AAH32596.1| 57|Homo sapiens LOC643648 protein protein. 30 3.3
BC011347-1|AAH11347.1| 460|Homo sapiens tweety homolog 1 (Droso... 30 3.3
AF177909-1|AAG02580.1| 450|Homo sapiens TTYH1 protein. 30 3.3
AB188496-1|BAD37142.1| 451|Homo sapiens tweety homolog 1 (Droso... 30 3.3
AB162930-1|BAD20189.1| 460|Homo sapiens hTTY1s protein. 30 3.3
U48437-1|AAB96331.1| 650|Homo sapiens amyloid precursor-like pr... 29 7.7
BC012889-1|AAH12889.1| 650|Homo sapiens amyloid beta (A4) precu... 29 7.7
AD000864-1|AAB50173.1| 650|Homo sapiens amyloid precursor-like ... 29 7.7
AB088477-1|BAC06326.2| 1332|Homo sapiens KIAA0482 protein protein. 29 7.7
>BC034494-1|AAH34494.1| 396|Homo sapiens synovial sarcoma
translocation gene on chromosome 18-like 1 protein.
Length = 396
Score = 81.8 bits (193), Expect = 8e-16
Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +2
Query: 74 MSVAFAVRGNRPPLSPAQ--IQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R Q IQKMLDEN HLIQ I EYQ+KG+ EC QYQQ+LHRNLVY
Sbjct: 1 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY 60
Query: 248 LASVADA 268
LA++AD+
Sbjct: 61 LATIADS 67
>AL078633-5|CAI18836.1| 396|Homo sapiens synovial sarcoma
translocation gene on chromosomeber 1 protein.
Length = 396
Score = 81.8 bits (193), Expect = 8e-16
Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +2
Query: 74 MSVAFAVRGNRPPLSPAQ--IQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R Q IQKMLDEN HLIQ I EYQ+KG+ EC QYQQ+LHRNLVY
Sbjct: 1 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY 60
Query: 248 LASVADA 268
LA++AD+
Sbjct: 61 LATIADS 67
>AB014593-1|BAA31668.1| 404|Homo sapiens KIAA0693 protein protein.
Length = 404
Score = 81.8 bits (193), Expect = 8e-16
Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +2
Query: 74 MSVAFAVRGNRPPLSPAQ--IQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R Q IQKMLDEN HLIQ I EYQ+KG+ EC QYQQ+LHRNLVY
Sbjct: 9 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY 68
Query: 248 LASVADA 268
LA++AD+
Sbjct: 69 LATIADS 75
>X79201-1|CAA55792.1| 391|Homo sapiens SYT protein.
Length = 391
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 105
>CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 105
>CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 105
>BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 101
>BC096223-1|AAH96223.1| 418|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 418
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 101
>BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 101
>AF343880-1|AAK21314.1| 422|Homo sapiens SYT variant 1 protein.
Length = 422
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 105
>AF244972-1|AAM00188.1| 414|Homo sapiens SYT protein protein.
Length = 414
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 105
>AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 105
>AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 457
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 101
>AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 488
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 101
>AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 457
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 101
>AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 488
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 101
>BC096222-1|AAH96222.1| 418|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 418
Score = 79.4 bits (187), Expect = 4e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
MSVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 61 LATIADSNQNMQSLLPAPPIQNMPMGPGGMNQSGPPPPPRS 101
>AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein
protein.
Length = 492
Score = 78.2 bits (184), Expect = 1e-14
Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Frame = +2
Query: 74 MSVAFAVRGNRPP--LSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVY 247
+SVAFA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 ISVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 248 LASVADAXXXXXXXX----XXXXXXAPGNVSQAPSSNPPSS 358
LA++AD+ PG ++Q+ PP S
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRS 105
>BC017804-1|AAH17804.1| 77|Homo sapiens synovial sarcoma
translocation gene on chromosome 18-like 2 protein.
Length = 77
Score = 68.5 bits (160), Expect = 8e-12
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +2
Query: 74 MSVAFA---VRGNRPPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLV 244
MSVAF +RG + ++ IQ++L+EN LI+ I EYQ KG+ EC QYQ VLHRNL+
Sbjct: 1 MSVAFVPDWLRG-KAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLI 59
Query: 245 YLASVADA 268
YLA++ADA
Sbjct: 60 YLATIADA 67
>AF201950-1|AAF17242.1| 77|Homo sapiens kiaa-iso protein protein.
Length = 77
Score = 68.5 bits (160), Expect = 8e-12
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +2
Query: 74 MSVAFA---VRGNRPPLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLV 244
MSVAF +RG + ++ IQ++L+EN LI+ I EYQ KG+ EC QYQ VLHRNL+
Sbjct: 1 MSVAFVPDWLRG-KAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLI 59
Query: 245 YLASVADA 268
YLA++ADA
Sbjct: 60 YLATIADA 67
>AF257501-1|AAG31035.1| 369|Homo sapiens SYT/SSX4v fusion protein
protein.
Length = 369
Score = 61.3 bits (142), Expect = 1e-09
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +2
Query: 140 LDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVADA 268
LD+N HLIQ I + Q KG+ EC QYQQ+LH NLVYLA++AD+
Sbjct: 1 LDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADS 43
>BC068993-1|AAH68993.1| 399|Homo sapiens SS18L1 protein protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.022
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 212 QYQQVLHRNLVYLASVADA 268
+YQQ+LHRNLVYLA++AD+
Sbjct: 52 RYQQILHRNLVYLATIADS 70
>AL078633-4|CAC29252.1| 128|Homo sapiens synovial sarcoma
translocation gene on chromosomeber 1 protein.
Length = 128
Score = 37.1 bits (82), Expect = 0.022
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 212 QYQQVLHRNLVYLASVADA 268
+YQQ+LHRNLVYLA++AD+
Sbjct: 52 RYQQILHRNLVYLATIADS 70
>BC032596-1|AAH32596.1| 57|Homo sapiens LOC643648 protein protein.
Length = 57
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 384 CEPPGTSTPLDGGLEDGACDTLPGANCCGGGKR 286
C PG G LE GAC+T+ GGG R
Sbjct: 11 CSVPGLEDQEKGELEAGACNTMARLALDGGGNR 43
>BC011347-1|AAH11347.1| 460|Homo sapiens tweety homolog 1
(Drosophila) protein.
Length = 460
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -2
Query: 396 RYCCC---EPPGTSTPL-DGGLEDGACDTLPGANCCGGGKRF 283
R+CCC EPPG+ P GG +C A C G G F
Sbjct: 68 RFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGF 109
>AF177909-1|AAG02580.1| 450|Homo sapiens TTYH1 protein.
Length = 450
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -2
Query: 396 RYCCC---EPPGTSTPL-DGGLEDGACDTLPGANCCGGGKRF 283
R+CCC EPPG+ P GG +C A C G G F
Sbjct: 68 RFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGF 109
>AB188496-1|BAD37142.1| 451|Homo sapiens tweety homolog 1
(Drosophila) protein.
Length = 451
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -2
Query: 396 RYCCC---EPPGTSTPL-DGGLEDGACDTLPGANCCGGGKRF 283
R+CCC EPPG+ P GG +C A C G G F
Sbjct: 68 RFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGF 109
>AB162930-1|BAD20189.1| 460|Homo sapiens hTTY1s protein.
Length = 460
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -2
Query: 396 RYCCC---EPPGTSTPL-DGGLEDGACDTLPGANCCGGGKRF 283
R+CCC EPPG+ P GG +C A C G G F
Sbjct: 68 RFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGF 109
>U48437-1|AAB96331.1| 650|Homo sapiens amyloid precursor-like
protein 1 protein.
Length = 650
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 402 GARYCCCEPPGTSTPLDGGLEDGACDTLP 316
G Y CC PPGT P + D + + P
Sbjct: 204 GVEYVCCPPPGTPDPSGTAVGDPSTRSWP 232
>BC012889-1|AAH12889.1| 650|Homo sapiens amyloid beta (A4)
precursor-like protein 1 protein.
Length = 650
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 402 GARYCCCEPPGTSTPLDGGLEDGACDTLP 316
G Y CC PPGT P + D + + P
Sbjct: 204 GVEYVCCPPPGTPDPSGTAVGDPSTRSWP 232
>AD000864-1|AAB50173.1| 650|Homo sapiens amyloid precursor-like
protein 1 protein.
Length = 650
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 402 GARYCCCEPPGTSTPLDGGLEDGACDTLP 316
G Y CC PPGT P + D + + P
Sbjct: 204 GVEYVCCPPPGTPDPSGTAVGDPSTRSWP 232
>AB088477-1|BAC06326.2| 1332|Homo sapiens KIAA0482 protein protein.
Length = 1332
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 393 YCCCEPPGTSTPLDGGLEDGACDTLPGANCCGGG 292
+C P S PL+G DG D PG + C GG
Sbjct: 35 FCSPHGPDMSGPLEGA--DGGGDPRPGESFCPGG 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,126,926
Number of Sequences: 237096
Number of extensions: 1142975
Number of successful extensions: 3647
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3637
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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