Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K05
(403 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 57 5e-09
Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 29 1.7
U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 29 1.7
U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p... 28 2.2
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p... 28 2.2
U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical p... 28 2.2
Z95559-6|CAB63363.1| 187|Caenorhabditis elegans Hypothetical pr... 27 3.8
AC006663-5|AAY43999.1| 490|Caenorhabditis elegans Hypothetical ... 27 3.8
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 27 5.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 27 5.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 26 8.8
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 26 8.8
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 26 8.8
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 26 8.8
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 56.8 bits (131), Expect = 5e-09
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +2
Query: 110 PLSPAQIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNLVYLASVADAXXXXXXX 289
P + +QK+LDEN LI IQEY + + E ++QQ+LHRNL++L+++AD
Sbjct: 6 PDQQSTVQKLLDENSRLIDIIQEYLNQSRADEAIKHQQLLHRNLLHLSNLADPFLLSQLK 65
Query: 290 XXXXXXXA-PGNVSQAPSSNPPSSGVDVPGGSQQQ 391
A P Q P P +SG P QQQ
Sbjct: 66 DDGTAAAALPDPNQQQP--QPGASGPPAPHLQQQQ 98
>Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical
protein F52F12.6 protein.
Length = 539
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 88 CCSRQSTS-TKPSSNTENVRRECSFDTNNTRIPSERTTFGMSSISAS 225
C S S+S TK + E+ C TNN + P+E+T +++S
Sbjct: 78 CSSIPSSSDTKENETEEDQNMTCDTTTNNAQKPTEQTATSADVVTSS 124
>U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc
finger proteinC.e-MyT1 protein.
Length = 539
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 88 CCSRQSTS-TKPSSNTENVRRECSFDTNNTRIPSERTTFGMSSISAS 225
C S S+S TK + E+ C TNN + P+E+T +++S
Sbjct: 78 CSSIPSSSDTKENETEEDQNMTCDTTTNNAQKPTEQTATSADVVTSS 124
>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
protein F10G7.10c protein.
Length = 1824
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 47 NSAARNTFIMSVAFAVRGNRPPLSPAQIQKMLDENVHLIQTI 172
+S A++ + + AV LS A + K L+ENVHL++TI
Sbjct: 422 HSRAQDLVTPACSRAVHVTVQMLSSASLCKELNENVHLVKTI 463
>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
protein F10G7.10a protein.
Length = 2025
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 47 NSAARNTFIMSVAFAVRGNRPPLSPAQIQKMLDENVHLIQTI 172
+S A++ + + AV LS A + K L+ENVHL++TI
Sbjct: 422 HSRAQDLVTPACSRAVHVTVQMLSSASLCKELNENVHLVKTI 463
>U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical
protein F10G7.10b protein.
Length = 1884
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 47 NSAARNTFIMSVAFAVRGNRPPLSPAQIQKMLDENVHLIQTI 172
+S A++ + + AV LS A + K L+ENVHL++TI
Sbjct: 422 HSRAQDLVTPACSRAVHVTVQMLSSASLCKELNENVHLVKTI 463
>Z95559-6|CAB63363.1| 187|Caenorhabditis elegans Hypothetical
protein Y41E3.13 protein.
Length = 187
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/24 (33%), Positives = 18/24 (75%)
Frame = -3
Query: 218 DIDDIPKVVLSLGILVLFVSNEHS 147
++ D+P ++ ++G+ V FVS+ H+
Sbjct: 100 NLPDVPPLIKTIGVFVFFVSSAHT 123
>AC006663-5|AAY43999.1| 490|Caenorhabditis elegans Hypothetical
protein H24K24.2 protein.
Length = 490
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 174 KNTKRKDNFWNVINISKFYTEIWC 245
KNT +D WN+IN+S +I+C
Sbjct: 435 KNTSTQDELWNLINMSMM--QIYC 456
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 133 ENVRRECSFDTNNTRIPSERTTFGMSSI 216
E++ EC FD N P +R M S+
Sbjct: 87 ESIDHECQFDANEDPYPEDREEIAMKSM 114
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 82 SICCSRQSTSTKPSSNTENVRRECSFDTNNT-RIPSERTTFGMSSISAS 225
+I S STST+P +++ DT+ T + SE TT + S +S
Sbjct: 698 TIITSTSSTSTRPGTSSTATDSPTMDDTSKTSTVTSEGTTLSIESTESS 746
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 390 CCCEPPGTSTPLDGGLE 340
CCC PP P GG E
Sbjct: 36 CCCPPPPPPPPCGGGYE 52
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 122 AQIQKMLDENVHLIQTIQEYQAKGQLLE 205
AQI K++DEN ++ +++ AK LE
Sbjct: 679 AQINKLVDENSQIVHKLEQIVAKNINLE 706
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 26.2 bits (55), Expect = 8.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 94 SRQSTSTKPSSNTENVRRECSFDTNNTRIPSERTTFGMSSIS 219
S ST+ ++T V E S +++T +PS+ T+ MSS+S
Sbjct: 428 SSPSTAGTSLASTA-VTTETSIGSSSTPLPSQSTSLSMSSLS 468
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +2
Query: 110 PLSPAQIQKMLDENVHLIQTIQEYQAKGQ 196
PL+PA++ K+ E + L+ T++ Y+ +G+
Sbjct: 180 PLNPAKVFKIDVETLCLVVTLKRYELEGR 208
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 314 PGNVSQAPSSNPPSSGVDVPGGSQQQYR 397
P N SQ P PP + P GSQ+ ++
Sbjct: 185 PANFSQPPPVIPPGYFFNAPTGSQEHHQ 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,298,728
Number of Sequences: 27780
Number of extensions: 188703
Number of successful extensions: 655
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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