Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K05
         (403 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   2.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   9.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   9.2  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    20   9.2  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   9.2  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    20   9.2  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 125 QIQKMLDENVHLIQTIQEYQAKGQLLECHQYQQVLHRNL 241
           Q+Q  + +  HL+QT  + +A   L +    QQ L + L
Sbjct: 152 QLQLNVIQQTHLLQTADKKKASAPLQQLALQQQRLIQQL 190


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 62  FLRQNYIINSKSTKTTR 12
           FL+Q Y+ NSK  K  +
Sbjct: 346 FLKQKYVKNSKLEKVIK 362


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -1

Query: 352 WRIRRRCLRHVTWS 311
           WR   RC+  + WS
Sbjct: 120 WRNATRCIGRIQWS 133


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 82  SICCSRQSTSTKPSSNTE 135
           S+ C R S   +PSS ++
Sbjct: 265 SVTCDRPSDEAEPSSTSK 282


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 314 PGNVSQAPSSNPPSS 358
           PG  S +PS + PSS
Sbjct: 84  PGGGSSSPSPSSPSS 98


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 107 PPLSPAQIQKMLD 145
           PP++P Q + MLD
Sbjct: 45  PPVTPPQGENMLD 57


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 58  KKYIYNVRSICCSRQST 108
           KK I N+R +C  +  T
Sbjct: 33  KKTIKNLRKVCSKKNDT 49


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 58  KKYIYNVRSICCSRQST 108
           KK I N+R +C  +  T
Sbjct: 7   KKTIKNLRKVCSKKNDT 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,962
Number of Sequences: 438
Number of extensions: 2413
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)