Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K04
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical pr... 163 5e-41
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical pr... 29 1.6
U64857-14|AAL16313.1| 402|Caenorhabditis elegans Hypothetical p... 29 2.1
U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical p... 29 2.1
U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical p... 29 2.1
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 27 4.9
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 27 4.9
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 27 4.9
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 4.9
AC199172-4|ABO33272.1| 304|Caenorhabditis elegans F-box a prote... 27 4.9
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 27 6.5
Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical pr... 27 6.5
>Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical
protein C14A4.1 protein.
Length = 298
Score = 163 bits (396), Expect = 5e-41
Identities = 74/124 (59%), Positives = 94/124 (75%)
Frame = +1
Query: 88 SETVVKNIGNVLNDPTRPLKERFRALFTLRNLGGETAINCISECFKDESVLLKHELAYCL 267
S+ + + G LND +PLK RFRALF LRN+G + +++ I +C DES LLKHELAYCL
Sbjct: 8 SDAEIDSFGEALNDTKKPLKARFRALFILRNIGCDRSVDWIGKCLNDESALLKHELAYCL 67
Query: 268 GQMQDKRAIPILRGVLEDQNHDPIVRHEAGEALGAIGDPNLREILEKYQYDSAIEVAETC 447
GQMQ+K AIP L VLED+ +P+VRHEAGEALGAI DP+++++L KY D EV+ETC
Sbjct: 68 GQMQNKHAIPTLVSVLEDEKQEPMVRHEAGEALGAIADPSVKDVLRKYAQDPCPEVSETC 127
Query: 448 QIAL 459
QIAL
Sbjct: 128 QIAL 131
Score = 91.1 bits (216), Expect = 4e-19
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +1
Query: 73 PMANVSETVVKNIGNVLNDPTRPLKERFRALFTLRNLGGETAINCISE-CFKDESVLLKH 249
P + S + V+ + L D + PL +R+RA+F+LRN+ + +I +++ + ++S L +H
Sbjct: 153 PTPSASTSDVEELAATLIDASLPLFDRYRAMFSLRNIKTDKSIKALAQGLYCEDSALFRH 212
Query: 250 ELAYCLGQMQDKRAIPILRGVLEDQNHDPIVRHEAGEALGAIGDPNLREILEKYQYDSAI 429
E+AY LGQ+Q A L+ L + +VRHE EALGAI + EIL++Y D
Sbjct: 213 EVAYVLGQLQSPVATQELKDRLLLSTENCMVRHECAEALGAIANEECTEILKQYVNDEER 272
Query: 430 EVAETCQIALE 462
V E+C++AL+
Sbjct: 273 VVRESCEVALD 283
>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical protein
W09D10.2 protein.
Length = 1335
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 273 LSQTVC*LMF*QHRFIFKAFTYAIYSGFSAQV 178
L+QT+ + +F F Y I++GFSAQV
Sbjct: 1059 LAQTILYFFYKNAMLVFVIFWYQIFNGFSAQV 1090
>Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical
protein H01G02.2 protein.
Length = 323
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 76 MANVSETVVKNIGNVLNDPTRPLKERFRALFTLRNLGG 189
M+ V+E V +G+++ D TRP E+F + + L G
Sbjct: 77 MSIVTEEVPYTLGDIIKDKTRPKTEQFNRWYYTQILSG 114
>U64857-14|AAL16313.1| 402|Caenorhabditis elegans Hypothetical
protein C37C3.2b protein.
Length = 402
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 266 KQYASSCFNSTDSSLKHSLMQFIAVSPPKL 177
K +C S D LKH L FI +PPK+
Sbjct: 117 KSKCKACGCSFDIDLKHKLSTFIMKNPPKI 146
>U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical
protein C37C3.2a protein.
Length = 436
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 266 KQYASSCFNSTDSSLKHSLMQFIAVSPPKL 177
K +C S D LKH L FI +PPK+
Sbjct: 117 KSKCKACGCSFDIDLKHKLSTFIMKNPPKI 146
>U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical
protein C37C3.2c protein.
Length = 413
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 266 KQYASSCFNSTDSSLKHSLMQFIAVSPPKL 177
K +C S D LKH L FI +PPK+
Sbjct: 117 KSKCKACGCSFDIDLKHKLSTFIMKNPPKI 146
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 247 HELAYCLGQMQDKRAIPILRGVLEDQNHDPIVR 345
HE+A + Q + A P++ G+ D+ DPI+R
Sbjct: 1348 HEIAKRMLMQQFRNAHPVMGGIRHDEITDPIMR 1380
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 247 HELAYCLGQMQDKRAIPILRGVLEDQNHDPIVR 345
HE+A + Q + A P++ G+ D+ DPI+R
Sbjct: 1348 HEIAKRMLMQQFRNAHPVMGGIRHDEITDPIMR 1380
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -3
Query: 236 TDSSLKHSLMQFIAVSPPKLRRVNKALKRSFNGLVGSFKTLPIFFTTVSLT 84
+D ++ ++M I + KLR+++ R G +GSF LP +S+T
Sbjct: 189 SDVKIRRNVMTSINENATKLRKLHIDRCRISPGAIGSFGDLPDSIEEISIT 239
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -3
Query: 236 TDSSLKHSLMQFIAVSPPKLRRVNKALKRSFNGLVGSFKTLPIFFTTVSLT 84
+D ++ ++M I + KLR+++ R G +GSF LP +S+T
Sbjct: 189 SDVKIRRNVMTSINENATKLRKLHIDRCRISPGAIGSFGDLPDSIEEISIT 239
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -3
Query: 236 TDSSLKHSLMQFIAVSPPKLRRVNKALKRSFNGLVGSFKTLPIFFTTVSLT 84
+D ++ ++M I + KLR+++ R G +GSF LP +S+T
Sbjct: 87 SDVKIRRNVMTSINENATKLRKLHIDRCRISPGAIGSFGDLPDSIEEISIT 137
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -3
Query: 236 TDSSLKHSLMQFIAVSPPKLRRVNKALKRSFNGLVGSFKTLPIFFTTVSLT 84
+D ++ ++M I + KLR+++ R G +GSF LP +S+T
Sbjct: 189 SDVKIRRNVMTSINENATKLRKLHIDRCRISPGAIGSFGDLPDSIEEISIT 239
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = -3
Query: 284 LSCICPKQYASSCFNSTDSSLKHSLMQFIAVSPPKLRRVNKALKRSFNGLVGSFKTLPIF 105
L+ P S + S+ SS KH+L Q + + A + + NG+V P
Sbjct: 6458 LTLSLPPLEGSRMYESSTSSTKHNLSQILMFQEELTNVLKTAFESNMNGIVFVSSVNPAD 6517
Query: 104 FTTVSL 87
T S+
Sbjct: 6518 IATKSI 6523
>AC199172-4|ABO33272.1| 304|Caenorhabditis elegans F-box a protein
protein 29 protein.
Length = 304
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 199 INCISECFKDESVLLKH-ELAYCLGQMQDK-RAIPILRGVL-EDQN 327
+NC+ FKD +LLKH Y + +D+ + +L +L ED N
Sbjct: 93 VNCMEAAFKDLKILLKHTSKLYISSKTRDRENIVSLLVDILKEDVN 138
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 386 FGSPIAPRASPASWRTMGS*F*SSSTPLRIGIALLSCICPKQYASS 249
F P+ P AS ++ T GS +TP I +++ C C K + +S
Sbjct: 90 FQKPVEPPASHVAFHTPGS-----ATPHDINLSIEHCTCQKIFDAS 130
>Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical
protein C55A1.5 protein.
Length = 361
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 149 SFNGLVGSFKTLPIFFTTVSLTLAIGIFFTY*QY--YKTFKP 30
S+ L+ F T+ IFF+ V LTL + Y Y Y T +P
Sbjct: 53 SYKNLLVLFSTVGIFFSVVELTLYPNVHSFYAGYFFYSTQRP 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,244,480
Number of Sequences: 27780
Number of extensions: 194251
Number of successful extensions: 508
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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