Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K04
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.1  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   8.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 361 ALGAIGDPNLREILEKY 411
           ALG IG+P +  + E Y
Sbjct: 636 ALGMIGEPKILSVFEPY 652


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 395 SRRFGSPIAPRASPASWRT 339
           S+RF S I  R SP+S R+
Sbjct: 25  SKRFSSSIVDRRSPSSSRS 43


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 260 YASSCFNSTDSSLKHSLMQFIAVSPPKLRRVNKALK 153
           Y S  +++     K+ + Q + V+P K    ++ALK
Sbjct: 131 YPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALK 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,114
Number of Sequences: 438
Number of extensions: 2358
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)