Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K04
(463 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g58180.1 68416.m06487 PBS lyase HEAT-like repeat-containing p... 112 1e-25
At3g62530.1 68416.m07025 PBS lyase HEAT-like repeat-containing p... 81 5e-16
At3g43260.1 68416.m04566 hypothetical protein predicted protein,... 34 0.041
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 31 0.38
At5g55370.1 68418.m06899 long-chain-alcohol O-fatty-acyltransfer... 29 2.0
At5g02140.1 68418.m00135 thaumatin-like protein, putative simila... 27 4.7
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff... 27 4.7
At5g06940.1 68418.m00784 leucine-rich repeat family protein cont... 27 6.2
At5g22060.1 68418.m02569 DNAJ heat shock protein, putative stron... 27 8.2
At3g44110.2 68416.m04728 DNAJ heat shock protein, putative (J3) ... 27 8.2
At3g44110.1 68416.m04727 DNAJ heat shock protein, putative (J3) ... 27 8.2
At3g13730.1 68416.m01733 cytochrome P450, putative similar to Cy... 27 8.2
At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS) id... 27 8.2
>At3g58180.1 68416.m06487 PBS lyase HEAT-like repeat-containing
protein contains Pfam profile: PF03130: PBS lyase
HEAT-like repeat; contains alternative donor splice site
TT at exon 2,hypothetical protein C14A4.1 -
Caenorhabditis elegans, PIR:T19243
Length = 314
Score = 112 bits (269), Expect = 1e-25
Identities = 62/115 (53%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Frame = +1
Query: 121 LNDPTRPLKERFRALFTLRNLGGETAINCISECFKDESVLLKHELAYCLGQMQDKRAIPI 300
L D ++P+ ERFRALF+LRNL G N + +D S LL HE A+ LGQMQD AIP
Sbjct: 21 LVDQSQPISERFRALFSLRNLKGPGPRNALILASRDSSNLLAHEAAFALGQMQDAEAIPA 80
Query: 301 LRGVLEDQNHDPIVRHEAGEALGAIGDPNLREILEK-YQYDSAIEVAETCQIALE 462
L VL D + PIVRHEA EALGAIG IL+K D A EV ETC++AL+
Sbjct: 81 LESVLNDMSLHPIVRHEAAEALGAIGLAGNVNILKKSLSSDPAQEVRETCELALK 135
Score = 112 bits (269), Expect = 1e-25
Identities = 59/129 (45%), Positives = 80/129 (62%)
Frame = +1
Query: 73 PMANVSETVVKNIGNVLNDPTRPLKERFRALFTLRNLGGETAINCISECFKDESVLLKHE 252
P A+ S V + VL D T+ + ER+ ALF LRN GGE A++ I + S LL+HE
Sbjct: 165 PAASFSS--VHQLRQVLLDETKGMYERYAALFALRNHGGEEAVSAIVDSLSASSALLRHE 222
Query: 253 LAYCLGQMQDKRAIPILRGVLEDQNHDPIVRHEAGEALGAIGDPNLREILEKYQYDSAIE 432
+AY LGQ+Q K A+ L VL D N P+VRHEA EALG+I D +LE++ D
Sbjct: 223 VAYVLGQLQSKTALATLSKVLRDVNEHPMVRHEAAEALGSIADEQSIALLEEFSKDPEPI 282
Query: 433 VAETCQIAL 459
VA++C++AL
Sbjct: 283 VAQSCEVAL 291
>At3g62530.1 68416.m07025 PBS lyase HEAT-like repeat-containing
protein contains Pfam profile: PF03130 PBS lyase
HEAT-like repeat
Length = 221
Score = 80.6 bits (190), Expect = 5e-16
Identities = 50/127 (39%), Positives = 70/127 (55%)
Frame = +1
Query: 79 ANVSETVVKNIGNVLNDPTRPLKERFRALFTLRNLGGETAINCISECFKDESVLLKHELA 258
AN+S + ++ L + T R ALF LRN GGE AIN I E ES +++ E A
Sbjct: 82 ANISS--IHSMRESLLEETEEDYYRRLALFALRNHGGEDAINVIIESLGVESSMIRIEAA 139
Query: 259 YCLGQMQDKRAIPILRGVLEDQNHDPIVRHEAGEALGAIGDPNLREILEKYQYDSAIEVA 438
+ LGQ++ K AI L +L D P+VR EA +ALG I D RE+L++ D +A
Sbjct: 140 FVLGQLESKTAIASLSKILRDVKEHPMVRVEAAKALGFIADEKSREVLQELSGDLDPIIA 199
Query: 439 ETCQIAL 459
+ C +L
Sbjct: 200 KGCDSSL 206
>At3g43260.1 68416.m04566 hypothetical protein predicted protein,
Arabidopsis thaliana
Length = 269
Score = 34.3 bits (75), Expect = 0.041
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 100 VKNIGNVLNDPTRPLKERFRALFTLRNLGGETAINCISECFKDESVLLKHELAY 261
+ N L + T + +R ALF L + GGE A+N I E ES ++ E A+
Sbjct: 204 IHNTRESLLEETEEIYQRCLALFALMHQGGEDAVNVIVESLGVESSMIHIEAAF 257
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 31.1 bits (67), Expect = 0.38
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 211 SECFKDESVLLKHELAYCLGQMQDKRAIPIL 303
S CF+ +V + LA LGQM D+ +P+L
Sbjct: 935 SACFEQRTVFTQQVLAKALGQMVDRTPLPLL 965
>At5g55370.1 68418.m06899 long-chain-alcohol O-fatty-acyltransferase
family protein / wax synthase family protein contains
similarity to wax synthase similarity to wax synthase
wax synthase - Simmondsia chinensis, PID:g5020219
similar to wax synthase [gi:5020219] from Simmondsia
chinensis
Length = 343
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 125 FKTLPIFFTTVSLTLAIGIFFTY*QYYKTF 36
F LP+FF++V + G FFT+ +K F
Sbjct: 46 FLLLPLFFSSVHFCVISGFFFTWLANFKLF 75
>At5g02140.1 68418.m00135 thaumatin-like protein, putative similar
to SP|P50699 Thaumatin-like protein precursor
{Arabidopsis thaliana}; contains Pfam profile PF00314:
Thaumatin family
Length = 294
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 287 LLSCICPKQYASSCFNSTDSSLKHSLMQFIAVSPPK-LRRVNKALKRSFNGLVGSFKTLP 111
L ICPK Y+ + +S+ + + I PPK L + + G + +
Sbjct: 208 LFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPKSLNEKLRKFELKIESKFGHYTVVT 267
Query: 110 IFFTTVSLTLAI 75
I T+V T A+
Sbjct: 268 ILLTSVLKTQAL 279
>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
effector-related similar to Endonuclease sen1
(Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
to tRNA-splicing endonuclease positive effector
(Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
Length = 1090
Score = 27.5 bits (58), Expect = 4.7
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 169 TLRNLG-GETAINCISECFKDESVLLKHELAYCLGQMQDKRAIPILRGVLEDQNHDPIVR 345
TL++LG G+ ++ I+ +K + LKHE LGQ + K + Q D I+
Sbjct: 927 TLKSLGAGKVSVGVITP-YKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDVIIM 985
Query: 346 ---HEAGEALGAIGD 381
+G +G + D
Sbjct: 986 SCVRASGHGVGFVSD 1000
>At5g06940.1 68418.m00784 leucine-rich repeat family protein
contains protein kinase domain, Pfam:PF00069; contains
leucine-rich repeats, Pfam:PF00560
Length = 872
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 100 VKNIGNVLNDPTRPLKERFRALFTLRNLGGETAINCISECFKDESVLLKHE 252
VK + N N ++ LK + R + +R+ + + CFKDE + L +E
Sbjct: 616 VKKLVNSKNISSKSLKAQVRTIAKIRH---KNITRILGFCFKDEMIFLIYE 663
>At5g22060.1 68418.m02569 DNAJ heat shock protein, putative strong
similarity to SP|O60884 DnaJ homolog subfamily A member
2 (Dnj3) Homo sapiens, several plant DnaJ proteins from
PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684
DnaJ central domain (4 repeats), PF01556 DnaJ C terminal
region
Length = 419
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 319 DQNHDPIVRHEAGEALGAIGDPNLREILEKYQYDSAIE 432
D+ DP E +A + DP REI ++Y D+ E
Sbjct: 44 DKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 81
>At3g44110.2 68416.m04728 DNAJ heat shock protein, putative (J3)
identical to AtJ3 [Arabidopsis thaliana] GI:2641638,
strong similarity to several plant DnaJ proteins from
PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684
DnaJ central domain (4 repeats), PF01556 DnaJ C terminal
region
Length = 343
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 319 DQNHDPIVRHEAGEALGAIGDPNLREILEKYQYDSAIE 432
D+ DP E +A + DP REI ++Y D+ E
Sbjct: 44 DKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 81
>At3g44110.1 68416.m04727 DNAJ heat shock protein, putative (J3)
identical to AtJ3 [Arabidopsis thaliana] GI:2641638,
strong similarity to several plant DnaJ proteins from
PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684
DnaJ central domain (4 repeats), PF01556 DnaJ C terminal
region
Length = 420
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 319 DQNHDPIVRHEAGEALGAIGDPNLREILEKYQYDSAIE 432
D+ DP E +A + DP REI ++Y D+ E
Sbjct: 44 DKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 81
>At3g13730.1 68416.m01733 cytochrome P450, putative similar to
Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066)
[Arabidopsis thaliana]; identical to CYP90D
(GI:14971017) [Arabidopsis thaliana]
Length = 491
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 170 VNKALKRSFNGLVGSFKTLPI 108
+N +L R F+GLVGSF P+
Sbjct: 140 INGSLHRRFHGLVGSFLKSPL 160
>At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS)
identical to solanesyl diphosphate synthase [Arabidopsis
thaliana] GI:19911233; contains Pfam profile PF00348:
Polyprenyl synthetase
Length = 406
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 152 RSFNGLVGSFKTLPIFFTTVSLTLAIG 72
RS+ GLVGS K +P +SL IG
Sbjct: 39 RSYGGLVGSCKAVPTKSKEISLLNGIG 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,542,087
Number of Sequences: 28952
Number of extensions: 177427
Number of successful extensions: 429
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 772134480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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