Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K03
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   2.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.0  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 347 FSVDAISRAAFIRSSLDFDPLCMCRPNDVI 258
           FS+D I +A F R   D   +  C+P  V+
Sbjct: 130 FSIDNILKADFGRRITDPINIRKCKPKTVV 159


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +1

Query: 343 ENQMESADENLKKMQLISVHIGYQYENIHKSAQVLSEIKEQIMAM 477
           ENQ  S  +  K+ ++I       YE +++  +++ EI++ I A+
Sbjct: 219 ENQWISVMKVNKQPKVIQGKSALSYERLNEFMRLVEEIEDVIEAI 263



 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 310 GAH*ILILFVCVDLMMLYCSYLL 242
           G H +LILF C+  +++   YLL
Sbjct: 268 GVHTLLILFSCLLHLVVTPYYLL 290


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = -2

Query: 298 ILILFVCVDLMMLYCSYLLEPFQLIFVLIL 209
           ++ LF  + +   YC++++    L+F+L +
Sbjct: 137 VVPLFFLLCIYYFYCAFIIFTVHLLFLLCI 166


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 159 VYFIGYLYSNSTYSM 115
           ++F  Y Y   TYS+
Sbjct: 163 IFFASYQYGTKTYSL 177


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 442 LELIYEYFHTGNQYEQILVAFSLSF 368
           L L Y  ++   QYE     ++LSF
Sbjct: 113 LTLCYAVYYWRQQYEDFWHRYTLSF 137


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 159 VYFIGYLYSNSTYSM 115
           ++F  Y Y   TYS+
Sbjct: 163 IFFASYQYGTKTYSL 177


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -3

Query: 177 RSHCIDVYFIGYLYSNSTYSMLNQLGR 97
           R H I   F  YLY  S  + LN   R
Sbjct: 386 RQHAITAKFPIYLYRMSVETKLNVFKR 412


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -3

Query: 177 RSHCIDVYFIGYLYSNSTYSMLNQLGR 97
           R H I   F  YLY  S  + LN   R
Sbjct: 388 RQHAITAKFPIYLYRMSVETKLNVFKR 414


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,598
Number of Sequences: 336
Number of extensions: 1959
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)