Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K03
         (491 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015994-1|AAH15994.1|  105|Homo sapiens chromosome 10 open read...    61   2e-09
AL358790-6|CAI52502.1|  105|Homo sapiens chromosome 10 open read...    61   2e-09

>BC015994-1|AAH15994.1|  105|Homo sapiens chromosome 10 open reading
           frame 32 protein.
          Length = 105

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 29/89 (32%), Positives = 57/89 (64%)
 Frame = +1

Query: 217 KQRLAERVQVNMNNITSLGRHIQRGSKSNELLIKAAREMASTENQMESADENLKKMQLIS 396
           K  L E+V     ++ +L + + +GS+S+ELL +AAR M   E+ +  ++++L+KM +I+
Sbjct: 17  KGLLTEKVTTCGTDVIALTKQVLKGSRSSELLGQAARNMVLQEDAILHSEDSLRKMAIIT 76

Query: 397 VHIGYQYENIHKSAQVLSEIKEQIMAMQK 483
            H+ YQ E I K+ +  S++++Q+  + K
Sbjct: 77  THLQYQQEAIQKNVEQSSDLQDQLNHLLK 105


>AL358790-6|CAI52502.1|  105|Homo sapiens chromosome 10 open reading
           frame 32 protein.
          Length = 105

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 29/89 (32%), Positives = 57/89 (64%)
 Frame = +1

Query: 217 KQRLAERVQVNMNNITSLGRHIQRGSKSNELLIKAAREMASTENQMESADENLKKMQLIS 396
           K  L E+V     ++ +L + + +GS+S+ELL +AAR M   E+ +  ++++L+KM +I+
Sbjct: 17  KGLLTEKVTTCGTDVIALTKQVLKGSRSSELLGQAARNMVLQEDAILHSEDSLRKMAIIT 76

Query: 397 VHIGYQYENIHKSAQVLSEIKEQIMAMQK 483
            H+ YQ E I K+ +  S++++Q+  + K
Sbjct: 77  THLQYQQEAIQKNVEQSSDLQDQLNHLLK 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,264,807
Number of Sequences: 237096
Number of extensions: 1055391
Number of successful extensions: 9792
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9792
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)