Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_K02
(402 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 110 1e-23
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 98 7e-20
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 87 1e-16
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 81 6e-15
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 69 3e-11
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 68 8e-11
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 67 1e-10
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 66 2e-10
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 64 1e-09
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 60 2e-08
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 56 2e-07
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 55 5e-07
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 54 8e-07
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 50 1e-05
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 49 3e-05
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 48 5e-05
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 48 7e-05
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 46 3e-04
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 43 0.002
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 43 0.003
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 39 0.042
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 38 0.056
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 35 0.69
UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella pneu... 34 0.91
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 34 1.2
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 33 1.6
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 33 2.1
UniRef50_Q5CTQ5 Cluster: Putative uncharacterized protein; n=2; ... 33 2.1
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 33 2.8
UniRef50_A5YSR1 Cluster: Sugar nucleotidyltransferase II; n=1; u... 31 6.4
UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5; Archae... 31 6.4
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 110 bits (264), Expect = 1e-23
Identities = 52/64 (81%), Positives = 60/64 (93%)
Frame = +1
Query: 82 KS*ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 261
K+ ++ Y++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNI
Sbjct: 4 KAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNI 63
Query: 262 GSGV 273
GSGV
Sbjct: 64 GSGV 67
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 97.9 bits (233), Expect = 7e-20
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +1
Query: 94 SLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGV 273
S YSALIL DDDVAVT EKISTI A VD+EPYWPGLF KALEGINV+DLITNIGSGV
Sbjct: 18 SCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINVKDLITNIGSGV 75
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 87.0 bits (206), Expect = 1e-16
Identities = 48/59 (81%), Positives = 50/59 (84%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 267
I YSALILVDD VAVT EKISTILKAA +VEPYW LFAKALEGINV+DLITNIGS
Sbjct: 33 IPYVYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 81.4 bits (192), Expect = 6e-15
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
++ YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 7 LACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 69.3 bits (162), Expect = 3e-11
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
++ Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+ DLI N+G+G
Sbjct: 6 LACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNVGAG 65
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 67.7 bits (158), Expect = 8e-11
Identities = 34/63 (53%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +1
Query: 82 KS*ISLCYSALILVDDDVAVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVRDLITN 258
KS ++ Y+AL+L DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV+DL+ +
Sbjct: 3 KSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLMS 62
Query: 259 IGS 267
+GS
Sbjct: 63 MGS 65
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 66.9 bits (156), Expect = 1e-10
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = +1
Query: 103 YSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLITNIGSG 270
Y+ALIL D+ + +T +K+ ++ AA V ++EP W LFAKALEG +V+DL+ N+GSG
Sbjct: 10 YAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLLLNVGSG 66
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 66.5 bits (155), Expect = 2e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +1
Query: 175 AAVDVEPYWPGLFAKALEGINVRDLITNIGSGV 273
A VD+EPYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 63.7 bits (148), Expect = 1e-09
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +1
Query: 94 SLCYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLITNIGS 267
++ Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+D++T + S
Sbjct: 8 AVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDILTEVAS 66
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 60.1 bits (139), Expect = 2e-08
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +1
Query: 103 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 267
Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL NV D++ G+
Sbjct: 21 YAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 56.4 bits (130), Expect = 2e-07
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +1
Query: 103 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGI 234
YSA IL +D V V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 24 YSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 55.2 bits (127), Expect = 5e-07
Identities = 25/56 (44%), Positives = 41/56 (73%)
Frame = +1
Query: 103 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
YS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G ++ L++ +GSG
Sbjct: 21 YSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDLGSLLSAVGSG 76
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 54.4 bits (125), Expect = 8e-07
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +1
Query: 94 SLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 267
+L Y+ALIL D +V +T EK+ ++ A V+VE W LFAKALEG ++++ N +
Sbjct: 6 ALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSA 63
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 50.4 bits (115), Expect = 1e-05
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +1
Query: 103 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI-TNIGS 267
Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V DL+ N GS
Sbjct: 23 YAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNSGS 78
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 49.2 bits (112), Expect = 3e-05
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 267
+++ +AL++ + +T E I+T+L A + VE +WP + AKAL N+ DLI + GS
Sbjct: 10 LAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +1
Query: 97 LC-YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
LC Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++ L++N+ G
Sbjct: 18 LCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLSNLSVG 76
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 48.0 bits (109), Expect = 7e-05
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +1
Query: 106 SALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 267
+A+IL D++ T + +I AA V V+ W LFA LEG NV++L+T +GS
Sbjct: 11 AAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 46.0 bits (104), Expect = 3e-04
Identities = 18/53 (33%), Positives = 36/53 (67%)
Frame = +1
Query: 97 LCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 255
+ ++A IL D + +T + + TI KAA +V+ W ++AKALEG +++++++
Sbjct: 6 ISFAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILS 58
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 43.2 bits (97), Expect = 0.002
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +1
Query: 82 KS*ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 231
K +++ Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 42.7 bits (96), Expect = 0.003
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
++ Y+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV DLI N+ G
Sbjct: 5 LACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVSLG 64
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 38.7 bits (86), Expect = 0.042
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 252
++ Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L+
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM 59
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 38.3 bits (85), Expect = 0.056
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 252
++ Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLM 59
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 34.7 bits (76), Expect = 0.69
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 82 KS*ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 261
K ++ Y+ALIL D + + + KAA VDV FA L+ +++ D+++ +
Sbjct: 4 KQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVLSKV 62
Query: 262 GSG 270
G
Sbjct: 63 SFG 65
>UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella
pneumophila|Rep: Expressed protein - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 509
Score = 34.3 bits (75), Expect = 0.91
Identities = 10/37 (27%), Positives = 24/37 (64%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 201
+ CY +L + ++TG+++ + ++A +++EPYW
Sbjct: 390 LEFCYKTQLLKLETCSITGKELQSAVQATLINLEPYW 426
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 33.9 bits (74), Expect = 1.2
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 103 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 252
Y+AL+L +T + + +L+AA V+V+ ALEG+N+ + I
Sbjct: 5 YAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 33.5 bits (73), Expect = 1.6
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 103 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 252
Y+ALIL + D + + ++ +L AA VDVE ALE +++ + +
Sbjct: 5 YAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 33.1 bits (72), Expect = 2.1
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 115 ILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 261
+L + VT E+ ST+ + A+D++ PG+F++ L G ++ L ++
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSL 106
>UniRef50_Q5CTQ5 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 268
Score = 33.1 bits (72), Expect = 2.1
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = -2
Query: 266 DPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIRAE*HKLIQ 87
D +L + + +K + N QYG T + ++ F+P ++SS +IR E +K +
Sbjct: 182 DTILTLSKNNSISNKEYQNI--QYGETISETLLELINAFNPKLSSSSKDKIREEVNKRMI 239
Query: 86 LLMPF*MLY 60
L+ + L+
Sbjct: 240 FLIDYCKLH 248
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 32.7 bits (71), Expect = 2.8
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 91 ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
++ Y+ALIL + I + KAA V+V FA AL +NV +++ +I G
Sbjct: 6 LACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLGSISFG 64
>UniRef50_A5YSR1 Cluster: Sugar nucleotidyltransferase II; n=1;
uncultured haloarchaeon|Rep: Sugar
nucleotidyltransferase II - uncultured haloarchaeon
Length = 233
Score = 31.5 bits (68), Expect = 6.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -1
Query: 156 DFLTGNGDIVIYQDKGGVTQANSAFDAILNVIRASRQKALAQG 28
DFL NGD V + G + A+ FDA+L V S A G
Sbjct: 98 DFLLLNGDNVFTRSVGPIVDASERFDAVLGVEEVSPAVAQTTG 140
>UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5;
Archaea|Rep: 50S ribosomal protein L12P - Pyrococcus
horikoshii
Length = 108
Score = 31.5 bits (68), Expect = 6.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 103 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 252
Y+AL+L + E + +L+AA V+ E ALEG+N+ ++I
Sbjct: 5 YAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVI 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,312,082
Number of Sequences: 1657284
Number of extensions: 4826554
Number of successful extensions: 12126
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 11705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12118
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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