Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K02
         (402 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic ri...    81   1e-15
BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, larg...    81   1e-15
BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, larg...    81   1e-15
AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal phosph...    81   1e-15
AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1 pr...    81   1e-15
CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.                81   1e-15
CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.                79   5e-15
X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein pro...    31   1.9  

>M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P1 mRNA, complete cds. ).
          Length = 114

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 35/60 (58%), Positives = 48/60 (80%)
 Frame = +1

Query: 91  ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
           ++  YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G
Sbjct: 7   LACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66


>BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 35/60 (58%), Positives = 48/60 (80%)
 Frame = +1

Query: 91  ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
           ++  YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G
Sbjct: 7   LACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66


>BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 35/60 (58%), Positives = 48/60 (80%)
 Frame = +1

Query: 91  ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
           ++  YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G
Sbjct: 7   LACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66


>AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal
           phosphoprotein P1 protein.
          Length = 113

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 35/60 (58%), Positives = 48/60 (80%)
 Frame = +1

Query: 91  ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
           ++  YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G
Sbjct: 7   LACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66


>AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1
           protein.
          Length = 114

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 35/60 (58%), Positives = 48/60 (80%)
 Frame = +1

Query: 91  ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
           ++  YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G
Sbjct: 7   LACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66


>CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 34/60 (56%), Positives = 48/60 (80%)
 Frame = +1

Query: 91  ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
           ++  YSAL+L DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G
Sbjct: 7   LACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66


>CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 34/56 (60%), Positives = 46/56 (82%)
 Frame = +1

Query: 103 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 270
           YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI ++G+G
Sbjct: 11  YSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICDVGAG 66


>X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein
           protein.
          Length = 1754

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -3

Query: 256 WLLNHEH*CPPRPLQIDQASTAQHLQQPL 170
           WLLN E  C   PLQID     Q   QPL
Sbjct: 365 WLLNKELGCINSPLQIDDDFRGQDFNQPL 393


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,451,565
Number of Sequences: 237096
Number of extensions: 802719
Number of successful extensions: 1218
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)