Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_K02
         (402 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...   110   8e-25
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...   110   8e-25
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...   110   8e-25
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...   107   5e-24
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro...    29   2.3  
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro...    29   2.3  
AY069731-1|AAL39876.1|  934|Drosophila melanogaster LP03809p pro...    29   2.3  
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA...    29   2.3  
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ...    28   5.4  
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl...    27   7.1  

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score =  110 bits (264), Expect = 8e-25
 Identities = 52/64 (81%), Positives = 60/64 (93%)
 Frame = +1

Query: 82  KS*ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 261
           K+ ++  Y++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNI
Sbjct: 4   KAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNI 63

Query: 262 GSGV 273
           GSGV
Sbjct: 64  GSGV 67


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score =  110 bits (264), Expect = 8e-25
 Identities = 52/64 (81%), Positives = 60/64 (93%)
 Frame = +1

Query: 82  KS*ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 261
           K+ ++  Y++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNI
Sbjct: 4   KAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNI 63

Query: 262 GSGV 273
           GSGV
Sbjct: 64  GSGV 67


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score =  110 bits (264), Expect = 8e-25
 Identities = 52/64 (81%), Positives = 60/64 (93%)
 Frame = +1

Query: 82  KS*ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 261
           K+ ++  Y++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNI
Sbjct: 4   KAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNI 63

Query: 262 GSGV 273
           GSGV
Sbjct: 64  GSGV 67


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score =  107 bits (257), Expect = 5e-24
 Identities = 51/64 (79%), Positives = 59/64 (92%)
 Frame = +1

Query: 82  KS*ISLCYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 261
           K+ ++  Y++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLITNI
Sbjct: 4   KAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNI 63

Query: 262 GSGV 273
           GSGV
Sbjct: 64  GSGV 67


>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein.
          Length = 1840

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -2

Query: 272  TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 120
            TP       S +     + A+ PGQ  +TS+ A  S     S  T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588


>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein.
          Length = 1840

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -2

Query: 272  TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 120
            TP       S +     + A+ PGQ  +TS+ A  S     S  T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588


>AY069731-1|AAL39876.1|  934|Drosophila melanogaster LP03809p
           protein.
          Length = 934

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -2

Query: 272 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 120
           TP       S +     + A+ PGQ  +TS+ A  S     S  T+TSSST
Sbjct: 632 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 682


>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
            protein.
          Length = 1837

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -2

Query: 272  TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 120
            TP       S +     + A+ PGQ  +TS+ A  S     S  T+TSSST
Sbjct: 1535 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1585


>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
           protein.
          Length = 1047

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 254 VIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEI 153
           +I S+ L+P+K   N P QY  T+   A    +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288



 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -2

Query: 245 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTR 117
           S+  +P+K   N P QY  T+   A    +  SP    S  T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452


>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
           single-stranded nucleicacid binding protein protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -2

Query: 245 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTR 117
           S+  +P+K   N P QY  T+   A    +  SP    S  T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,914,386
Number of Sequences: 53049
Number of extensions: 234679
Number of successful extensions: 599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)